Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <-------MYC3                                          <-------MYC2                                          ------->MYC3                                          ----------------------->TaNAC69(2)                                          ------->MYC2                                          ------->MYC4                                          <-------MYC4            <---------YAB1               --------->ANAC55(2)           <---------TGA1a           <---------AHL20(2)            <---------TGA1a           --------->ZAT6           <---------AHL20(1)        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <---------YAB1       <---------ICU4           --------->AtLEC2--------->TGA1a     ==============================================bZIP_DOF     <-----------GT1     <----------DOF2      <---------YAB1 --------->TGA1a     <---------ICU4   ------>ZmHOX2a(1)    <---------At4g35610--------->ALFIN1 --------->ICU4<---------TOE1(2) <-------- --->ZmHOX2a(1)     <---------ARR11(3)   --------->O2  --------->ANAC58--------->O2       <---------- ------ALFIN1       --------->ARR11(3)   <---------O2  --------->ANAC58<---------O2     <------------   ctctcctctttattatttttaagttcttctgattatcacttacacgtgtgccttctcatgcaatttttaccactcgtgtgtttccaaatgtttttcactc  2372200                  ------>NtERF2                 --------->DEAR3(1)              --------->ANAC46            <---------DOF5.7(2)           <---------ARR14(2)           --------->ARR14(2)        --------->ANAC58                <---------DAG2        --------->ANAC55(2)             <----------DOF2        --------->ANAC58           <---------MYB52(1)        <---------ANAC55(2)       <-------GAMYB    --------->ANAC58    <-----------HVH21            <---------MYB46(3)--------->ANAC58         --------->YAB1 ---GT1 --------->ANAC55(1) <---------TOE2(3)      --------->ANAC46   --------->ZAT6 -GT1   --------->ANAC46   <-----------GT1<-----------GT1           <-----------GT1 ------------ANAC81   --------->ICU4 <-----------GT1       --------->MYB46(3)  --------->AHL20(2)   ttcttccttcacgtaaacgctgcccttattaacgtctgttaactttacctctcacgaatcaaacaccatttaacaccataatcaaatattgaaatattct  2372300                                                                       ----------->GT1                                                                    <---------At4g35610                                                                    --------->At4g35610                                                                   ------->TEIL                                                              <---------At4g35610                                                              --------->At4g35610                <---------YAB1                               <-----------RAV1(1) <---------ARR11(3)             ----------->TGA1                              <------ZmHOX2a(2)     --------->ARR11(3)           <---------ICU4                                 <---------ARR11(3)    <---------CCA1(2)           --------->YAB1                                 <---------ARR14(2)   <---------AHL20(1)          <---------YAB1                                  --------->ARR11(3)   --------->AHL20(1)          --------->ICU4           <---------YAB1         --------->ARR14(2)   --------->ARR11(3)        --------->YAB1            --------->At5g28300--------->TOE1(2)--------->HSFB2a(2)        <---------ICU4         <---------At5g28300   --------->TOE2(2)<---------HSFB2a(2)  --------->YAB1    --------->WRKY38(1)       <-----------GT1   <----------DOF2 <---------------AGL15     <---------ATHB12  --------->TOE2(3)    ----------->GT1       <-----------GT1------>ZmHOX2a(2)  <---------ARR11(3)   aaaacgttgatcatgatgacgatttttgtaaattactgtaattgtatatactttacatacgatctgctgcatctggaaaaatatatcttcaaatcatatt  2372400                                <---------CCA1(1)                               --------->ARR11(3)                               <---------AHL20(1)                               --------->AHL20(1)                               <---------ARR11(3)                             <---------TOE2(3)                             ----------->ARR10                          <---------MYB52(1)                         <---------RAP2.6(3)                   ----------->RAV1(1)                    <---------MYB52(1)                      --------->ANAC46              --------->TOE1(3)                   <---------At4g35610  --------->ARR14(2)  --------->ANAC58              <----------DOF2                   <-------GAMYB<---------RVE1(1)           --------->ANAC58              --------->TOE2(3)                  <-----------RAV1(1)   <---------ARR14(2)  --------->AtLEC2      --------->TOE2(3)                  <---------ANAC58   <---------ANAC55(2)  <---------ANAC58       <---------ANAC46                  <---------ANAC58   --------->ANAC55(2)  <---------ANAC58       ----------->GT1        <-----------GT1  <-------GAMYB  ------->TEIL     <-------TEIL    --------->MYB52(1)  --------   agtttatctttcaccatcttccgttgccgttaagatattatgtatccacagtatataagtgcatgcaacaaaaaataactgtaacgtttaaactttaaaa  2372500                                    <---------AHL20(2)                                    --------->AHL20(2)                                   <---------YAB1                                 <---------ICU4                                 -------->ATHB1                                <---------AHL20(2)                                --------->ICU4                         ----------->GT1                                --------->AHL20(2)                        --------->DAG2          <----------DOF2      ------>ZmHOX2a(1)             --                      ---------->DOF2<---------AHL20(2)  <---------ANAC58                          <-               --------->ATHB12 <---------YAB1  <---------DAG2<-----------GT1               ------>ZmHOX2a(1)              <---------YAB1    --------->AHL20(2)       <---------ANAC58        <----------DOF2 ---- ->AHL20(2)  <-----------GT1    --------->AHL20(1)     <-----------GT1 ----------->TBP     --------->TOE2(3)   tatagttttggcatttttcattgcaaaaggtaaaattattaaatattcgactttttatttcgtttttcttcctataaattcccctttcagtttcctaaat  2372600            ------>ZmHOX2a(1)                                                                      <-     --------->ARR11(3)                                                                            --     <---------GLK1(2)                                                                            <--     <---------ARR11(3)                                             <---------ARR11(3)            <--   <---------TOE2(3)                                <---------AHL20(2)  --------->AHL20(2)       ---- ------->ANAC55(2)         --------->ZAT14       --------->TOE2(3)  --------->ARR11(3)           <--- --------ANAC55(2)  *TSS   <---------ZAT14    <----------DOF2   ---------->DOF2             <-------- ----->AHL20(2)     <---------GLK1(1)     ---------->ID1    ---------->DOF2            <-----------GT1   tacttaagattttcctaagatgaaatctctgtagttttttttttgttcctttcttaaatttcgaaagaaagacatttattaaaccaaaataactctttag  2372700      --------->ANAC58      --------->ANAC58    <---------AtLEC2                                                                           ------ --------ICU4                                                                           --------->ANAC58 ------->ATHB12                                                                 <-------TEIL   ------ -------YAB1                                             --------->At4g35610<---------------AtSPL8 ----ZmHOX2a(2)                                          <---------At4g35610--------------->AtSPL8 ----->ARR11(3)      --------->DAG2             <---------GLK1(1)           --------->HSFB2a(2)<----- ------ARR11(3)     ---------->DOF2          --------->ANAC46              <---------ANAC46   ------- --DOF2----------->GT1                     <-----------GT1              <----------DOF2 --------->ANAC58   atcattgcaaggaaaaatgttgaaaagtgcaagtccaatggcattctacgatatcggagagcagcaatactctactttcgggtacattttaagcaaacct  2372800                                                                               ------->TEIL         --------->At4g35610                                               <-----------ARR10         <---------At4g35610                                             --------->LBD16       <------ZmHOX2a(1)                                                <---------ANAC55(1)       ===============================HOX2a_HOX2a                       <---------ANAC58    <-----------RAV1(2)                                             <---------GLK1(1)   --------->TOE1(2)                                           <---------At4g35610  --------->ANAC58                                             --------->At4g35610  --------->ANAC58             <------ZmHOX2a(2)             <-----------RAV1(2) --->TOE2(2)         <---------WRKY18(1)                --------->ANAC46--------->ANAC55(2) --->TOE1(2)         <-----------GT1                <------ZmHOX2a(2)   <---------ANAC55(2) ----LBD16         <---------WOX13(1)      <---------------------WRI1   <---------ANAC58            < ---->RAV1(2) --------->ANAC55(2)    <---------ATHB12  <---------LBD16  <---------ANAC46      -------   gggaacgcaggagcttacgagattgacccttcgatcccaaacatcgacgatgcgatctacggctcagatgagttccgtatgtacgcttacaaaatcaaac  2372900                                                               <---------ALFIN1                                                          --------->ANAC58                                                          --------->ANAC58   --------->ANAC46                   --------->TGA1a                  <---------ANAC46      ------>ZmHOX2a(2)                   --------->ANAC58                 <---------ANAC58  ----------->ARR10                   --------->O2                     <---------ANAC58 --------->LBD16           --------->ANAC46     --------->ALFIN1   <------NtERF2 --------->ANAC46     --------->TOE2(1)  ----------->HVH21         --------->REM1(2) <---------ANAC46           <-----     --------->TOE1(1)  <---------SPL7           --------->ALFIN1--------->ANAC58 <---------MYB52(1)    ------>ZmHOX2a(1)   <---------ZAT14      <---------At5g28300 --------->ANAC58<-------GAMYB <----- ---------ZAT18    ================================================bZIP_DOF ------>ZmHOX2a(1)  ------ -->MYB52(1)       --------->ANAC58    --------->SPL7   ---------->DOF2 <---------ARR11(3)<---------At5g28300   ggtgtcctcgtactcgtagccacgactggacggagtgtccctacgctcaccgtggcgagaaagccacacgccgtgatcctcgccgttacacttactgtgc  2373000                                                                                                   --                                                                                             --------                                                                                            <--------                                                                                            <--------                                                                                           <------NtERF2                                                                                          ------>NtERF2                                       <---------ANAC58                                  <---------ANAC46                                       <---------ANAC58                                 <------NtERF2                                      <------NtERF2                                    --------->LBD16                                     --------->REM1(2)                                 <---------ATERF1(1)                                    --------->ALFIN1                                  <---------DEAR3(1)                                  --------->DEAR3(1)              <---------ARR14(2)  --------->ANAC46                            --------->ANAC58                      --------->ARR14(2) <---------MYB55(2)                            --------->ANAC46                   <---------ANAC58      --------->MYB46(3)         --------->LBD16  --------->ATERF1(1)                  <---------ANAC58      <---------LBD16        <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                     <---------ANAC46     ----------->RAV1(2)       <---------LBD16  <---------ANAC46                   ------->MYC3             --------->ANAC46    --------->ANAC58    <---------ANAC58                   <-------MYC3           <---------ALFIN1 --    --------->ANAC58    <---------ANAC58------>NtERF2      <-------MYC2          --------->ATERF1(1) ----ZAT14  <----------DOF2 --------->ANAC58               ------->MYC2        <---------TCP16(1)<--- ----ZAT18  --------->GLK1(1)    <------NtERF2     <---------ARR14(2)          <---------TCP20 <----- --->ZAT14  <---------GLK1(1)   ------>NtERF2      --------->ARR14(2)         -----------------------   agtcgcatgcccggctttccgaaatggcgcatgccaccgtggcgactcatgcgaattcgcacatggcgtattcgagtactggctccacccggcgcgttac  2373100  Previous    Next  AGI:  At5g07500.1    Description:  PEI1; nucleic acid binding / transcription factor. similar to zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT5G58620.1); similar to Cu2+ plastocyanin-like [Arabidopsis arenosa] (GB:AAR15441.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) Range:  from: 2372620    to: 2373656    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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