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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                        ------->GAMYB
                                                                       --------->MYB46(3)
               --------->LBD16                                  <---------ANAC46
          --------->At4g35610                                   <---------ANAC58
          <---------At4g35610  <---------HSFB2a(2)              <---------ANAC58               -----
          --------->ZAT2       <---------ANAC46              <---------MYB52(1)<---------AHL20(2)
          <---------ZAT2  <---------ANAC58                 <-----------RAV1(1)--------->AHL20(2)  --
   ------>ZmHOX2a(1)      <---------ANAC58             --------->MYB46(3)  --------->YAB1     <-----
--->ZmHOX2a(1) ------>ZmHOX2a(1)                     ------->TEIL      <---------MYB52(2) ----------
----->TOE2(3)----------->RAV1(2)                  --------->ANAC55(2)----------->RAV1(1)---------->DOF2
 
ctcatcctccctcagctcctgaaactatgtcgtttcggaaaatacccttgtatatgtaactactgttgtttgcaacaaacataaaattttgaaaagtata  2345400
                                                                                   ----------->GT1
                                                                                  <---------TOE2(3)
                                                                           --------->YAB1
                                                                        --------->YAB1
                                                                        --------->ATHB51
                                                                        -------->HAHB4
                                                                        --------->ATHB12
                                                                        <--------HAHB4
                                                                        <--------ATHB1
         --------->AHL20(2)                                             <---------ICU4
         <---------ATHB51                                              <---------YAB1              <
    ----------->GT1                                                    --------->ICU4     <---------AHL20(2)
---->YAB1--------->ICU4       --------->YAB1  ----------->GT1          <---------ATHB51   --------->AHL20(2)
------->YAB1 <---------AHL20(2)      --------->MYB52(1)                --------->AHL20(2) <---------YAB1
----YAB1 <---------AHL20(2)   --------->AHL20(2)             <------ZmHOX2a(1)  ---------->DOF2-----
->GT1--------->AHL20(2)    --------->YAB1    <---------TOE2(3)  <------ZmHOX2a(1) --------->DAG2  --
 
ataagaaatgaaataattcatttcatactctaataaaaaaaaacgaataatgtaatacattgaaggaggacttaataattagaaaaaggttatataatta  2345500
                                 --------->ARR11(3)
                                 <---------ARR11(3)
                        --------->AHL20(2)
                        <---------YAB1     <---------MYB46(3) <----------DOF2                  -----
     <----------DOF2    <---------AHL20(2) ----------->GT1<-----------GT1              <---------HSFC1(2)
-------TEIL      ----------->GT1--------->CCA1(2)         ---------->ID1               --------->HSFB2a(1)
---->MYB59      <---------TOE2(3)--------->AHL20(1)      <-----------GT1               <---------HSFB2a(1)
------->CCA1(2) --------->DAG2 --------->ARR11(3)    <---------AHL20(2)                --------->HSFC1(2)
 
gatacattctttttttaaaaaggttatataattagatatattcgagtggttagaattttttttccctttgtaaacatttgaaacttaagaaatttctggt  2345600
                                                                                         --------->ANAC58
                                                                                --------->YAB1
                                                                                <--------ATHB1
                 --------->DAG2                                                 <---------ICU4
       ---------->DOF2                                                         <---------YAB1
    ----------->GT1                                                            <---------ATHB51
<---------AHL20(2)                                     ----------->GT1     ------------>CBF
<---------AHL20(1)                                  =====================HOX2a_HOX2a     --------->ANAC58
--------->AHL20(2)                           ---------->DOF2              --------->ANAC58     -----
--------->AHL20(1)                          --------->YAB1        <------ZmHOX2a(2)    --------->MYB52(1)
---->WRKY18(1)  ---------->DOF2  --------->TOE2(3)  <------ZmHOX2a(1)     --------->ANAC58     -----
 
caataaaatgtaaagttgaaaaagtaatagaaatattcttagagaaattatagcaggatggaaaaatggatcaccacaaacaataatagcaaacgaaaac  2345700
                                                                                               -----
                                                                                            --------
                                                                                          --------->AHL20(1)
                              --------->AHL20(2)                       ------------------------>ANAC81
                              ----------->TBP                    --------->LBD16          --------->AHL20(2)
                             <---------AHL20(1)                  ----------->GT1 -------------------
      --------->AHL20(2)     --------->AHL20(1)            <---------ATHB12     <----------ID1 <----
---->ANAC58                  <---------ARR11(3)           *TSS  --------->HSFB2a(2)      --------->YAB1
---->ANAC58             ------------>CBF        <----------DOF2 <---------HSFB2a(2)    --------->AHL20(2)
 
gaaattcaaaaaaattcaggtctctgaaacaatatatatacccatagccatctttccatcaaatcatccagaaaaaacaaaaaaaaacaaaaaaataata  2345800
           <----------DOF2                 --------->AHL20(2)
        <---------AHL20(1)                 <---------AHL20(2)
        --------->ARR11(3)              --------->AHL20(2)                            <------MYB46(1)
        <---------ARR11(3)             --------->AHL20(2)                             <------MYB83
        --------->AHL20(1)           --------->YAB1                                 <--------P
       --------->RVE1(1)           --------->AHL20(2)                             <-----------RAV1(1)
   --------->AHL20(2)              --------->AHL20(1)                        --------->MYB59 <------
---->AHL20(2)                     --------->YAB1       <-------TEIL     <---------AHL20(1)  ------>ZmHOX2a(2)
->YAB1 --------->CCA1(1)        --------->AHL20(2)    --------->CCA1(2) --------->AHL20(1) <--------
----->ANAC81              --------->YAB1<---------AHL20(2)              <---------AHL20(2)--------->ARR11(3)
-----AHL20(2)             --------->AHL20(2)  --------->ICU4            --------->AHL20(2)<---------ARR11(3)
 
aaacaaaaaaatatcttttttttttctaataaaaaaaaaataataaataaatatgagatacacaaatgtgtccattttattaggcatgttggtgatcttt  2345900
                                                                                <---------DEAR3(2)
                                                                                <------MYB83
                                                                                <------MYB46(1)
                                                                                <---------MYB46(3)
                                                                             <-------MYC3
                                                                             ------->MYC3
                                ------>MYB83                   <---------MYB46(3)     <---------MYB52(1)
                                ------>MYB46(1)               --------->ALFIN1<---------MYB52(1)
                              --------->AtMYB61             <---------ANAC46--------->O2
                    --------->ATHB12                      --------->ZAT14   ========================
                 --------->At4g35610                      --------->ZAT18   <---------TGA1a
<-----------GT1  <---------At4g35610                      <---------ZAT14   --------->TGA1a
----DOF2       <-----------RAV1(2)                    --------->ALFIN1      <---------O2          --
-YAB1 <---------ATHB12  ----------->HVH21             <-----------RAV1(1) <---------ALFIN1     -----
 
gtttcaccaatggtgttcgcagatgatttgacaccaatcccagagggcaaaccccaagtggtgcagtggttcaatacccacgttggtccattggctcaac  2346000
                                        --------->ANAC55(1)
                         --------->ZAT2 --------->ANAC55(2)
                         <---------At4g35610
                         --------->At4g35610
                         ----------->RAV1(2)
                      <---------At4g35610    --------->YAB1
          ------>ZmHOX2a(2)             --------->ANAC58                                        ----
         <------ZmHOX2a(2)              --------->ANAC46                                        <---
        --------->AGP1<---------ZAT2    --------->ANAC58                                        <---
        --------->ARR14(2)        <---------At4g35610                                           <---
        <---------ARR11(3)        <---------ZAT2                                                ----
        <---------ARR14(2)        --------->At4g35610                                           ----
        --------->ARR11(3)<----------CDC5  ------->TEIL                             --------->ATHB12
      ----------->ARR10  <---------ZAT2 --------->O2                                <---------ICU4
=========bZIP_DOF     --------->ZAT2  <---------ALFIN1                             --------->ICU4
-------->DOF2         --------->At4g35610 <---------CCA1(2)             <-----------GT1   <---------
---->ANAC46 ------>ZmHOX2a(1)    <---------ATERF1(1)          <---------ALFIN1     <---------YAB1<--
 
gtaaaggcttagatcctgctctcgtagctgctgaggctgctccacgtatcatcaacgtataactcacacttgattttcccaaactcatcattgtaacaat  2346100
            --------->AHL20(2)
            <---------AHL20(2)
            --------->AHL20(1)                                                             <--------
        --------->AHL20(2)                                                                 ---------
      --------->TOE2(3)                                 --------->At4g35610          --------->YAB1
    >>>>>>>>>MYB98                      <---------At4g35610                          ---------->DOF2
 <---------AHL20(2)                   <-----------RAV1(2)                           <---------ATHB12
----->AHL20(1)                   --------->ATHB51       <---------At4g35610    --------->ANAC58  ---
------AHL20(1)                   --------->ATHB12       <------MYB46(1)        --------->ANAC46 <---
------AHL20(2)                  <---------YAB1          <------MYB83           --------->RAP2.6(2)
------ARR11(3)                  <---------AHL20(2)      ----------->GT1        --------->ANAC58 ----
----->ARR11(3)                <---------ICU4           <---------DEAR3(1)   ------->GAMYB  <--------
----->AHL20(2)               --------->ICU4      ---------->DOF2           --------->MYB46(3)   <---
--GT1--------->YAB1       --------->AHL20(2) <---------ARR14(2)          --------->MYB52(1)<--------
-------AHL20(2)         ----------->GT1 --------->At4g35610          --------->ZAT6 --------->ICU4--
 
atattttaacataaattttttgaaaacatgtaaatattattgcaggtgaatccaaagggaggtgaattcaaaacactaacagacgcaataaagagcgttc  2346200
      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)
 --------->ANAC58
 --------->ANAC58
-HSFB2a(1)
>HSFB2a(1)
------>ANAC46
------LBD16   <---------MYB46(3)
----->HSFB2a(2)      --------->YAB1         <---------ZAT14             --------->MYB46(3)
-ANAC58   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                       <------ZmHOX2a(1)
------HSFB2a(2)     <---------YAB1          --------->ZAT14    --------->ETT(2)                    -
-ANAC58  ---------->DOF2---------->DOF2<---------ANAC46        <---------ETT(2)  <---------ICU4    -
------->LBD16xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)       --------->ZAT18 <---------MYB52(2)--------->ATHB12
 
ccgcagggaacacaaagcgggtgatcataaagatggctcatggtgagtacagagagaaggtcactatcgacaggaacaaacccttcattacattgatggg  2346300
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AGI:  At5g07400.1   
Description:  forkhead-associated domain-containing protein / FHA domain-containing protein. similar to tyrosyl-DNA phosphodiesterase-related [Arabidopsis thaliana] (TAIR:AT5G15170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39513.1); similar to Os04g0403400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001052698.1); contains InterPro domain Tyrosyl-DNA phosphodiesterase; (InterPro:IPR010347); contains InterPro domain HIRAN (InterPro:IPR014905); contains InterPro domain Forkhead-associated (InterPro:IPR000253); contains InterPro domain SMAD/FHA (InterPro:IPR008984)
Range:  from: 2340643    to: 2345459    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At5g07410.1   
Description:  pectinesterase family protein. similar to ATPPME1, pectinesterase [Arabidopsis thaliana] (TAIR:AT1G69940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62286.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050)
Range:  from: 2345759    to: 2347498    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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