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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
---------->
DOF2
---------
-->
LBD16
<------------
->
HSFB2a(2)
<------
MYB83
----------->
GT1
<---------
AHL20(2)
--
HSFB2a(2)
<------
MYB46(1)
<---------
MYB46(3)
--------->
AHL20(2)
-
LBD16
<----------
DOF2
<---------
REM1(2)
<---------
REM1(1)
<-----------
GT1
aaacaaaagactctttgtatgtaggtttcttctacatggttgtggtaattcatgttgttttagttgtagtcatcagtttttaatttagcatttgaaaagt
2154400
--------->
ALFIN1
<---------
ANAC58
<---------
ANAC46
----------->
GT1
<---------
ANAC46
----------->
GT1
--------->
TOE2(3)
<---------
ANAC58
<-----------
RAV1(1)
<---------
YAB1
<---------
AHL20(2)
<---------
ANAC46
->
DOF2
--------->
AHL20(2)
<---------
ARR11(3)
<-----------
GT1
---------->
DOF2
-------
---------
WRI1
--------->
ARR11(3)
---------->
ID1
<----------
DOF2
<-----------
GT1
tcaatgttgtttatatagcatcttcgattatcttagaaaggttattgaattttgtttttttttgttacttttgtgtgtggtaaaggtgttttaaccttgc
2154500
--------->
ATHB12
<--------
HAHB4
<---------
ICU4
--------->
TOE2(3)
<---------
ATHB12
--------->
ARR11(3)
--------->
ICU4
<---------
ARR11(3)
<---------
YAB1
--------->
ARR11(3)
<---------
CCA1(2)
<---------
ZAT6
<---------
ARR11(3)
<---------
ANAC46
<-----
<---------
ZAT14
<---------
TOE2(3)
<---------
ANAC58
--------->
ARR14(2)
--------->
ZAT14
<-----------
GT1
<---------
ANAC58
<---------
ARR14(2)
-->
AtLEC2
--------->
YAB1
--------->
YAB1
<-------
TEIL
<---------
ANAC46
<------
ZmHOX2a(1)
aacttctgtactgtaatcatttaacaatattaagatgttctatttgagttttgt
agtttcatcgcttgtgtcttaaatcttatttagtgaggattctaat
2154600
--------->
AHL20(2)
<---------
AHL20(2)
<---------
RVE1(1)
-
<---------
ARR11(3)
--------->
bZIP60(2)
<
------->
TEIL
--------->
ARR11(3)
<----------
ID1
--
<---------
YAB1
<---------
WOX13(1)
--------->
DAG2
--
--------->
CCA1(2)
---------->
DOF2
<---------
GLK1(2)
---------->
DOF2
-----
----
TOE2(3)
--------->
ICU4
<-----------
GT1
<---------
YAB1
--------->
YAB1
<------------
CBF
<-
gtaaacttccaagagatgatgaaaatgaatttacattcaaagtaagtgtgatagatttttttgtaataaaaaaagggacatgtcattgtcaaaaccaaga
2154700
------->
GAMYB
<---------
HSFB2a(2)
<-----------
GT1
<-----------
HVH21
-------->
AHL20(1)
<-----------
GT1
--------->
AtMYB61
---------
AHL20(2)
<------
ZmHOX2a(1)
--------->
MYB46(3)
------->
ATHB51
---------->
DOF2
<---------
At4g35610
<-------
TEIL
<---------
ANAC46
------->
AHL20(2)
------------>
CBF
<----------
DOF2
<---------
HSFB2a(2)
<---------
ANAC58
---->
YAB1
--------->
HSFB2a(2)
--------->
At4g35610
--------->
HSFB2a(2)
*
TSS
<---------
ANAC58
--------
AHL20(2)
--------->
ALFIN1
<---------
ZAT18
<---------
At4g35610
<---------
ANAC55(2)
-
attattttgtttttagaaaaaagagagtgttgcaattttcagaggactttttaaccctcagcatctagaggtccaccatc
acttgagtttcgtcttccat
2154800
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------------
AtSPL8
--------------->
AtSPL3
---
--------------->
AtSPL8
<--
<---------
ARR14(2)
<---
--------->
ARR14(2)
<-------
TEIL
<----------
DOF2
<---------
ARR11(3)
--------->
CCA1(2)
<-----
---------->
DOF2
--------->
ARR14(2)
<---------
MYB46(3)
--------->
AHL20(2)
---------->
DOF2
--------->
TOE2(3)
--------->
AHL20(2)
--------->
SPL7
--------->
TOE1(3)
<-----------
GT1
<
------------------------>
ANAC81
--------->
RVE1(1)
<---------
ARR14(2)
<---------
----->
ZmHOX2a(1)
----------->
GT1
--------->
ARR11(3)
--------->
TOE2(3)
---------->
DOF2
<-----
tcctgttttttttcagagaccggcaaaataaaaaaaaagaagatcgtacaactaaaaatacctcaaagaaggaagatacaaaagtagtaacctttgttgg
2154900
<----------
DOF2
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
AGP1
<-----------
ARR10
<---------
ARR14(2)
<---------
ARR11(1)
<---------
ARR11(3)
<----------
DOF2
--------->
ARR11(3)
--------->
O2
--------->
ARR14(2)
--------->
ANAC58
<---------
ARR14(1)
--------->
bZIP60(2)
<---------
CCA1(2)
<---------
O2
<---------
REM1(1)
--------->
LBD16
--------->
ANAC58
<---------
HSFB2a(2)
------>
ATHB12
--------->
ANAC46
--------->
HSFB2a(2)
-------
MYB46(3)
<---------
ANAC46
--------->
TGA1a
<---------
LBD16
----
------
YAB1
<-----------
RAV1(1)
===============
bZIP_DOF
--------->
HSFB2a(1)
----
-
MYB46(1)
--------->
ARR14(2)
==================
MYC_MYB
<-----------
GT1
----
---------
WOX13(1)
<---------
ANAC46
<---------
ALFIN1
--------->
HSFC1(2)
-----
--
RAV1(1)
<---------
ARR11(3)
---------->
DOF2
<-------
GAMYB
<---------
HSFC1(2)
<---------
DAG2
-
MYB83
<---------
CCA1(2)
==================
bZIP_DOF
<---------
HSFB2a(1)
<----------
DOF2
tgattgatactatatctgttgtgggttttagacaaagaccacgtctttgcagttgtagattggaattttccggatctttctctaaatcgctttttctccg
2155000
<----------
DOF2
<---------
MYB52(1)
--------->
ARR14(2)
<----------
DOF2
<---------
ARR14(2)
----->
ANAC58
---------->
DOF2
--------->
At4g35610
----->
ANAC46
<---------
At4g35610
<---------
At4g35610
----->
ANAC58
--------->
At4g35610
<-----------
RAV1(2)
---->
LBD16
<-------
GAMYB
--------->
GLK1(2)
<---------
ZAT6
<---------
YAB1
agcaacttttgtttggggttaagctcaaagaatccgttcttttcag
gtgagtctcttcttcaatagtcttaggggttttagttcttcagttttcttattc
2155100
<---
----
<----
-----
-------
<-------
--------->
ARR14(2)
<----------
DOF2
<---------
ARR14(2)
<---------
WOX13(1)
<-----------------
AG
<---------
DAG2
<------
ZmHOX2a(1)
<---------
ICU4
--------->
ARR14(3)
<----------
DOF2
<---------
TOE2(3)
--------->
ATHB12
<---------
ARR14(3)
<-----------
GT1
<---------
TOE1(3)
--------->
ICU4
<---------
GLK1(2)
<----------
DOF2
<---------
ANAC58
--------
<---------
YAB1
<---------
ARR14(2)
<---------
DAG2
<---------
ANAC58
<--------
--------->
YAB1
<---------
ARR11(3)
---------->
ID1
--------->
ANAC55(2)
<------
<----------
DOF2
--------->
ARR11(3)
<-----------
GT1
<-------
TEIL
------>
ZmHOX2a(2)
<---------
At4g35610
<-----------
GT1
<-----------
GT1
<-----------
GT1
------->
TEIL
<------
ZmHOX2a(2)
tgcctctgctttcatgattgtttttttccattgaagattttgacctttgagggaattttttcctttttgctttatgtacgtgttaaggatccaaaatcat
2155200
------
ICU4
----->
ATHB51
-----
YAB1
<---------
TOE2(3)
<---------
ANAC58
---->
ICU4
<---------
TOE2(3)
<---------
LBD16
-->
YAB1
----------->
ARR10
<---------
ANAC58
--
ATHB12
<---------
ANAC58
<---------
LBD16
->
ICU4
<---------
ANAC58
--------->
ARR14(2)
--
-
ARR11(3)
<---------
MYB46(3)
------->
TEIL
<---------
ARR14(2)
<--
---
ICU4
<---------
AHL20(2)
--------->
CCA1(2)
<----------
DOF2
--------->
LBD16
<----
tatttcggacactatttaaacgaattggttgagatttgatgttatgaagcttgaattttgtgtcttttactctgtttccggggctagtttgctaaattct
2155300
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AGI:
At5g06950.1
Description:
AHBP-1B (bZIP transcription factor HBP-1b homolog); DNA binding / transcription factor/ transcription repressor. Identical to Transcription factor TGA2 (TGA2) [Arabidopsis Thaliana] (GB:P43273); similar to TGA6 (TGA1a-related gene 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G12250.2); similar to TGA6 (TGA1a-related gene 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G12250.1); similar to TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] (GB:AAK84889.1); contains InterPro domain bZIP transcription factor, bZIP-1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zip
Range:
from: 2151026
to: 2154554
Orientation: Forward
Links:
TAIR
MIPS
AGI:
At5g06960.1
Description:
OBF5 (OCS-ELEMENT BINDING FACTOR 5); DNA binding / transcription factor. Identical to Transcription factor TGA5 (TGA5) [Arabidopsis Thaliana] (GB:Q39163;GB:Q9FL50); similar to TGA6 (TGA1a-related gene 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G12250.2); similar to TGA6 (TGA1a-related gene 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G12250.1); similar to bZIP transcription factor bZIP99 [Glycine max] (GB:ABI34658.1); contains InterPro domain bZIP transcription factor, bZIP-1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004
Range:
from: 2154781
to: 2157647
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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