Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          --------->AHL20(2)                                                                                     <---------ATHB51                                                                                     <---------ATHB12        <---------ANAC46                                                   --------->DOF5.7(2)        <---------ZAT6                                                    --------->TOE1(3)        ----------->GT1                                                 <---------TOE1(3)<---------ICU4    <-------GAMYB                                                      <---------DOF5.7(2)   <---------MYB46(3)                                                 <---------WRKY38(1)<---------AHL20(2)  --------->ALFIN1                                       ------>ZmHOX2a(1)--------->TOE2(3)      <--- -----------RAV1(1)                                     --------->TOE2(3)----------->GT1<------------ -----YAB1                                         <---------DAG2     <---------WRKY12--------->YAB1   caatgtggttgtgttaatttctagtctcaactctcaagttcaaaaaaactaaacctttcctcaaaacatttgtcaacgttaaatccaataataaatatag  2102800                         --------->AHL20(2)                         <---------AHL20(2)                      --------->AHL20(1)                           <---------TOE1(3)                      <---------AHL20(1)                           <---------TOE2(3)                      <---------ARR11(3)                        <<<<<<<<<MYB1                 --------->AHL20(2)                             <<<<<<<<<MYB2               <----------DOF2 <---------YAB1        <-----------GT1----------->GT1 --------->ARR11(3)   --------->ARR11(3)        ----------->GT1 >>>>>>>>>>AtMYB44 <---------ARR11(3)  <---------AHL20(2)      <---------AtLEC2   <---------MYB52(1)             <----- ---ZmHOX2a(1) --------->TOE1(3)      <---------AHL20(1)    <------ZmHOX2a(2)          -------------- ---AGL15      --------->TOE2(3)      --------->AHL20(1)  <------ZmHOX2a(1)            <-------------   gaacatctcatataaaactttaaatatttttttatgctaatatatatgcatggtttaacaggatcagttagggtttaaaatatgagttaatggtactata  2102900                     <---------YAB1                   --------------->AGL15       --------->LBD16      <---------ANAC46      <---------ANAC58      <---------ANAC58                                                 <----------ID1             <--      <---------ANAC55(1)                                         --------->YAB1           ---------- ----YAB1     --------->YAB1                        <-----------GT1  --------->MYB52(1)  --------->ALFIN1 ->AtSPL8    <------ZmHOX2a(2)               <---------TOE2(3) >>>>>>>>>TBF1        <---------ATHB12 --AtSPL8--------->SPL7               <----------DOF2     <---------ATHB12    <---------ARR11(3)  ---   atcgacttccgtgcgatcatactatttttgtgaacaaactcttttctaatgtttttacaaatgaagaagaataacgacaaggtctaatcaagtgggataa  2103000                                                                                       ------>ZmHOX2a(1)                                                                                 <---------ALFIN1                                                                                <---------ZAT18                                                         >>>>>>>>>>>>>>>>>LFY   --------->ZAT18                      --------->ATHB51               <---------ICU4             --------->ZAT14                      --------->ATHB12               --------->ATHB51          <---------ANAC58           ---------->DOF2     --------->YAB1        --------->YAB1            <---------ANAC58 <-----------GT1   <---------AHL20(2)               <---------ATHB51       <------------CBF<--------- -------AHL20(1)  --------->ICU4                    --------->ICU4        <---------ICU4   ---------- ->GT1 <---------YAB1<---------YAB1                 <---------ATHB12  --------->AHL20(2)  ----------- ------>ARR11(3)  --------->AHL20(2)        <----------DOF2           <---------AHL20(2)  <----------   tatatacttcttataaagtatttattattgaaataagaattttggacttttgcaattatggccattggataattaaaaattgcgcactcctatccatttt  2103100        ---------->DOF2      --------->YAB1   --------->YAB1                                    --------->At4g35610  --------->KAN4(1)                                  ----------->RAV1(2) <---------KAN4(2)  --------->ATERF1(1)              <---------At4g35610 ------AGL15      <---------ANAC58           --------->ARR14(2) ----->AGL15      <---------ANAC58           <---------ARR14(2)*TSS             <---------GLK1(1) ------>AGL3   --------->DAG2               <---------CCA1(2) <----------DOF2   --------->GLK1(1) -------AGL2 ---------->DOF2  ------------>CBF      ------->TEIL     <------ZmHOX2a(1)   gagaataatcaaaagaaaaggcgttgccttatatcaatactcatccctatcttgcacctgaagactttggaggaatgtagagatttcagaaaatcccaaa  2103200                                                            <-----------ARR10                                                            <---------ARR11(1)                                                            ------->TEIL                                                            <---------ARR14(2)                                                            --------->GLK1(2)                                                            --------->ARR14(2)                                                           <---------CCA1(2)                                                 <---------YAB1                                             <---------AHL20(2)                                  ------>ZmHOX2a(1)  <---------AHL20(2)                       <------                         ------>ZmHOX2a(2)------->TEIL     <---------ARR14(1)              <---------YAB1       <----------DOF2   ================HOX2a_HOX2a<---------WOX13(1)  <----------DOF2 <----------DOF2   aacaaaacactttagatttcatttcgatcgctattcctcccatgcatttttttgattaatcgaatctttgttttctttttcaacttcgaacttttgattt  2103300                                        <-----------RAV1(1)                                 <---------TOE1(2)                                 <---------TOE2(2)             <---------ANAC46              --------->ATHB12--------->YAB1                   <---------ANAC58          <---------ARR11(3) <<<<<<<<<ARR1                     <---------ANAC58          <---------AHL20(1) <---------ATHB12              <---------ANAC58        --------->TOE2(3)          --------->AHL20(1) <<<<<<<<<ARR2                 <---------ANAC58<---------WOX13(1) ---GLK1(1)  <---------YAB1--------->WOX13(1)           <----------DOF2 <---------YAB1   <----------DOF2   ccctccgttcaatatatcattgaacttaacaatcatatgtttctgtggcaatttgtgtctttcttgcttgttatatgatggataacatcaactttgaatt  2103400                                                <---------ZAT2                                              <-----------RAV1(2)                                              <---------ALFIN1                                         --------->RAP2.6(2)                                         --------->DEAR3(1)                                         --------->AtMYB61                                         ------->GAMYB                                        --------->DEAR3(2)                       ------------>AtMYB77 --------->DEAR3(1)                     <------NtERF2      <------------AtMYB77                    --------->LBD16  <---------MYB52(2)                    ------>NtERF2  =======================RAV                    <---------ATERF1(1) <---------MYB55(2)                   --------->RAP2.6(2)  --------->MYB46(3)                   --------->ATERF1(2) -------->P                   <---------RAP2.6(2)--------->MYB55(1)                                       <-----                   <---------ATERF1(2)------->GAMYB                                         ---------                  --------->RAP2.6(3)--------->MYB46(3)                                     ------->GAMYB                  --------->ATERF1(1)<---------MYB55(2)                                    --------->MYB46(3)                 <---------ATERF1(1) <---------MYB111(2)   <-----------GT1                -------->P            --------->ANAC46       ----------->RAV1(1)--------->AHL20(2)               <---------ATHB12            --------->ANAC58     <---------At4g35610  <---------AHL20(2)              --------->ANAC46            --------->ANAC58     --------->At4g35610<---------MYB52(1)    <---------YAB1 --------->WOX13(1)   ctcaaacgcttcacaaggaagccggctacagttgcagcaacaaccgccccagccgtttaatttacaagacttgaatatgattcaatacaatcaaccatca  2103500                                                                    >>>>>>>>>SPL5                                                                    >>>>>>>>>SPL1                                           <---------ZAT14          --------->SPL7                                           --------->ZAT18          >>>>>>>>>SPL4                                       --------->ATHB12           --------->LBD16               --------->ARR14(3)     <---------YAB1            --------->HSFB2a(2)               <---------ARR11(3)    --------->SPL7             --------------->AtSPL3             --               <---------ARR14(3)   <---------SPL1(1)     <---------ICU4                   ------>MYB83               --------->ARR11(3)  <---------SPL7  --------->WOX13(1)                      ------>MYB46(1) ----ICU4     --------->GLK1(1)    <---------SPL1(2) <---------ATHB12      <-------TEIL    -------->P >YAB1   <---------LBD16       ------------------>SPL14--------->WOX13(1)--------->YAB1   <---------ALFIN1   tctccttggactacggagaccttctctggtctaactccgtacgattgcacagccaatcaatcttttcccgtacaatgttcatcttcaaaaccctaccctt  2103600                                                 ------>MYB46(1)                     --------->WOX13(1)          --------->GLK1(2)                              -----                   <---------YAB1       --------->TOE2(3)                                  --------->CCA1(2)                  --------->TOE2(3)    --------->YAB1                                     <---------ARR11(3)            --------->SPL7             --------->ATHB12                  ------>NtERF2    --------->AHL20(1)          <---------SPL7               <--------HAHB4              ------>ZmHOX2a(1) <------ZmHOX2a(2)         <---------ANAC58              <---------ICU4        --------->HSFC1(2)  --------->HSFB2a(2)         <---------ANAC58   <---------YAB1       ------>MYB83--------->HSFB2a(1) <---------HSFB2a(2)        --------------->AtSPL3        <---------ATHB12      <---------YAB1      <---------LBD16 -----        --------------->AtSPL8<---------GLK1(2) --------->WOX13(1) =========================HOX2a_HOX2a ---->ZmHOX2a(1) --------->YAB1       --------->ICU4    <---------------------WRI1--------->LBD16   cctcgtttcatccgtaccatcatcaatcttctgattctccatcattagaccaatctgtatcgatgattcctatgcagcctcttccggatcaatatatgaa  2103700  Previous    Next  AGI:  At5g06800.1    Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT2G01060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23378.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 2103163    to: 2105899    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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