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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                              <---------ANAC58
                                           --------->GLK1(2)
                                          <---------ARR14(2)
                                          <---------GLK1(2)
                                          --------->ARR14(2)
                                      --------->ATERF1(1)
                                      <------NtERF2
                                     ------>NtERF2
                                    --------->RAP2.3(2)
                                    --------->DEAR3(1)
          <----------DOF2           --------->RAP2.3(3)
        <---------At4g35610        --------->ERF1
        --------->ZAT2             --------->RRTF1(1)                                             <-
        <------NtERF2              --------->RAP2.3(1)                                --------->ZAT2
        <---------ZAT2             --------->ATERF1(1)                                ==============
        --------->At4g35610       --------->LBD16                                     <---------ZAT2
   --------->DAG2                 <---------ATERF1(1)                       --------->ATERF1(1)   <-
  ---------->DOF2             --------->ARR14(2)                     --------->GLK1(2)--------->At4g35610
  --------->DAG2              <---------ARR14(2) --------->At4g35610 <---------ARR14(2)         ----
 ---------->DOF2  <---------ALFIN1<---------RAP2.3(1)                --------->ARR14(2)      -------
-->ANAC55(2)      ----------->RAV1(1)----------->RAV1(1)        --------->LBD16       ----------->RAV1(2)
---HSFB2a(2)   --------->ANAC58  --------->ANAC46<---------ZAT2--------->LBD16        <---------At4g35610
---ANAC55(2)   --------->ANAC46 <---------LBD16  --------->ZAT2--------->HSFB2a(2)  <-----------RAV1(2)
-->HSFB2a(2)   --------->ANAC58 --------->SPL7<---------ANAC58<---------LBD16       ================
 
aacaaaaaggcagctttctcgccacagttccagcatccggcgccagattccgagcagaaaactctcccggagaatcggagtcgtccctcagctgaagaat  1961000
            <---------HSFB2a(2)
         --------->ARR14(1)                                                <------MYB46(1)
         --------->GLK1(2)                                                 <------MYB83
         --------->CCA1(2)                                                --------->MYB59
        --------->ARR11(1)                                           <---------TOE2(3)
        <---------GLK1(2)                                            <---------TOE1(3)
        --------->ARR14(2)                                      <-------GAMYB
      ----------->ARR10                                         --------->At4g35610
----------RAV1(1)                                              --------->MYB46(2)
==========RAV                    <---------WOX13(1)            --------->MYB52(2)
--------REM1(1)                --------->ATHB12                <---------MYB46(3)
----->YAB1<-------TEIL  <---------ANAC58                     <---------MYB52(1)<---------ANAC46
-->YAB1 <---------ARR14(2)    <---------YAB1<---------ANAC46 <--------P<------ZmHOX2a(1)
==========RAV           <---------ANAC58<-----------HVH21  <---------MYB46(3) <-------TEIL  --------
 
gatgttgcagagattcgcgaggcaattgggtttgtgattgaatcgtcgcgagtgaattacactggttagttgaaggataggtccgtctaataagggtgga  1961100
                                        ===============================HOX2a_HOX2a
                                        ==============================HOX2a_HOX2a
       --------->MYB46(3)            <-----------RAV1(2)
      ------>NtERF2                 <------ZmHOX2a(2)              <---------ANAC46
     --------->RAP2.6(2)       <---------ANAC55(2)             <------ZmHOX2a(2)
  --------->ANAC58             <---------ANAC46               <---------ARR11(3)
  --------->ANAC58             --------->ANAC55(2)    <---------LBD16  <---------CCA1(2)
  --------->ANAC46            <---------LBD16 <---------ARR14(2)------>ZmHOX2a(2)
->ALFIN1--------->AtMYB61 <---------ICU4<------ZmHOX2a(1) *TSS--------->ARR11(3)             -------
 
gatggaagccaccatcgtcttcgttttcttcattacgggatcaggagaggttttggctctggagagatcgtcgtgtatcgattactactactacttgtcc  1961200
                                                                 ----------------->AGL1
                                                     <-----------GT1                             ---
                                                 <---------RVE1(1)                             -----
                                                 <---------CCA1(1)                   ------>NtERF2--
                                                <---------ARR11(3)                   <---------At4g35610
                                       --------->AtMYB61      <---------SPL7  <---------ARR14(2) <--
                               <-----------GT1  --------->ARR14(2)            --------->ARR14(2) ---
                          <---------ANAC46      --------->ARR11(3)          ----------->ARR10  <----
                  <------------CBF    ----------------->AGL2--------------->AtSPL3  --------->DEAR3(1)
--->ID1      ----------->GT1<---------ZAT6      <---------ARR14(2)       ----------->GT1      ------
 
ctaatcgaaccagaccgagtaaattggtttagtgttacaagaccaaaaccagatatttatcttatcgtaccagaccgagtaaattcgccgcttatcgcct  1961300
       ----------->GT1
      <---------DEAR3(1)
     --------->SPL7                         --------->LBD16
   --------->LBD16                         ------->GAMYB
   ----------->HVH21                      <---------LBD16
   <---------SPL7                        -------->P
 <---------LBD16                       <---------WRKY38(1)
------>DEAR3(1)                      <-----------HVH21
->NtERF2--------->At5g28300        --------->LBD16
---->NtERF2                      <---------LBD16               <---------ANAC58
-------ETT(1)                   --------->MYB52(1)             <---------ANAC46
-------->HVH21      <---------ARR11(3) <---------WRKY12  <---------TOE2(3)   ------------>CBF
-----ATERF1(1)      --------->ARR11(3)--------->WRKY18(1)<---------TOE1(3)  ------>ZmHOX2a(1)
--->DEAR3(1)  --------->YAB1 <-----------HVH21<-----------HVH21<---------ANAC58     <---------YAB1
 
ccgacccggacggtgaatcggaataccttctgggttaccgggtcaaccgggtcactgggtaaggtttcgttttcttctcctccaattctcatttcatctt  1961400
                                          <---------ICU4
                                         --------->ICU4
                                       <---------GLK1(1)
                                       --------->GLK1(1)                                      <-----
                              <-----------HVH21                                  <----------DOF2
                          --------->HSFB2a(1)                               ----------->RAV1(2)
                          --------->HSFC1(2)        <XXXXXXXXXXXXXXXXXXXXMIR851-3P            <-----
                          <---------HSFB2a(1)  <---------ANAC58       --------->HSFC1(2)      ------
               <---------TOE2(3)  --------->At4g35610                 --------->HSFB2a(1)  ---------
           *TSS<---------TOE1(3)  <---------At4g35610<----------DOF2  <---------HSFB2a(1)  <--------
--------->GLK1(1)         <---------HSFC1(2)   <---------ANAC58       <---------HSFC1(2)  <-------TEIL
<---------GLK1(1)      <------ZmHOX2a(1) <---------ATHB12  <---------MYB46(3) ------>ZmHOX2a(1)
 
cagatttcttcatcgattagggtttaggaaccttgtcatcggaaatcatttcttgtctttgtttgttattcgaagcttctcctgcttatttgatacatat  1961500
                       --------->MYB46(3)
                  --------->ANAC46
                <---------AtLEC2
               <---------REM1(2)
        --------->ARR14(2)                                                           ------>ZmHOX2a(2)
        <---------ARR14(2)                          --------->ARR14(2)             --------->ARR14(2)
----ARR14(2)--------------->AGL15                   <---------ARR14(2)             <---------ARR14(2)
----GLK1(2)<-----------------AGL1              <-----------HVH21              --------->MYB52(1)   <
--->ARR14(2)<---------------AGL15     <------ZmHOX2a(1)            --------->At4g35610  <------ZmHOX2a(2)
>ANAC55(2) <-----------------AGL3   <---------TOE1(3)             --------->DEAR3(1)<------ZmHOX2a(2)
-ANAC55(2) --------->ZAT6           <---------TOE2(3)     <----------DOF2    ----------->HVH21   <--
 
tctctcttccagttactctacatggaaccattcgttgttaaggagaacatcgtcgcatccgcttcttcgccgatgaagaagcgacggatcgatcacactg  1961600
         --------->ARR14(2)
         <---------ARR14(2)
        ----------------------->TaNAC69(2)
       <---------MYB46(3)                                                         <---------DOF5.7(2)
   ----------->HVH21                                                           <------MYB83
 --------->At4g35610                                  --------->CCA1(2)        <------MYB46(1)
 <---------At4g35610                                 --------->ARR14(2)       --------->MYB46(2)
 ----------->RAV1(2)                                 <---------ARR14(2)  <------NtERF2             <
 --------->ZAT2                                      --------->ARR11(1) --------->LBD16          ---
 <---------ZAT2               --------->ZAT6     <---------DOF5.7(2)   <---------ANAC46         ----
-----------RAV1(2)  <---------TOE2(3)         <---------MYB46(3)      <---------LBD16         ------
---------HVH21     <-----------GT1        <---------DEAR3(1)     ------->TEIL --------->MYB59 ======
 
agtcagctgatggttctgcgattaacgcttctaactctagtagcatcggtggtaacgatacggtgatgaacatggcggagtttggtaacgacaactccaa  1961700
                                                                    <---------CCA1(1)
   <------ZmHOX2a(1)                                                <---------RVE1(1)
<-----------RAV1(2)                                                <---------ARR11(3)
--------->YAB1                        ------->TEIL                 --------->ARR11(3)
---------ATHB12                      <---------CCA1(2)           <---------TOE2(3)
------>WOX13(1)                  <---------ANAC58           --------->ATHB12               ---------
----->MYB46(3)      <---------ANAC55(2)                   --------------->AGL15<<<<<<<<<TBF1
----->RAV1(1) <---------TOE2(3)  <---------ANAC46   <-----------RAV1(1)     <<<<<<<<<TBF1  <--------
============RAV----------->GT1   <---------ANAC58   <---------MYB46(3)  <-----------GT1 <---------MYB52(1)
 
caatcaggagtctcaacaaggttacatatactacttccttgtatctcaattctagttgttgcctcattgagattttttcttcttcttcgttgttagctag  1961800
                                                                  ----------->GT1
                                                                 --------->DAG2
                     -------->ATHB1                             ---------->DOF2
                     --------->ATHB12                         ------->GAMYB                 --------
                     --------->YAB1                    --------->ANAC58                     --------
                     <---------ICU4                    --------->ANAC58                  --------->ATHB12
  <---------YAB1    <---------ATHB12               --------->HSFB2a(2)            ---------->DOF2
>At4g35610     <---------ATHB12                    <---------HSFB2a(2)          <------ZmHOX2a(1)  -
-STY1(2) --------->ZAT6                     <----------DOF2--------->MYB52(1)  <----------ID1   <---
 
aaattttcatttacactaatcaaatcattgttctgtttcagtttgcactttcttcaagaagccaacgaaaagtaaaaacataaggaaaagaaccattgac  1961900
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AGI:  At5g06410.1   
Description:  DNAJ heat shock N-terminal domain-containing protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO39912.1); contains InterPro domain Heat shock cognate protein B, C-terminal oligomerisation; (InterPro:IPR009073); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623); contains InterPro domain Co-chaperone Hsc20; (InterPro:IPR004640)
Range:  from: 1959537    to: 1961159    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At5g06420.1   
Description:  zinc finger (CCCH-type/C3HC4-type RING finger) family protein. similar to nucleic acid binding [Arabidopsis thaliana] (TAIR:AT1G01350.1); similar to Os02g0301000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001046620.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64331.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841)
Range:  from: 1961412    to: 1963039    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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