Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------ANAC46                                                                               <---------ANAC46                                                                               <---------ANAC58                                                                               <---------ANAC58                                                                              <------NtERF2                                                                              ------>NtERF2                 --------->TOE1(3)   >>>>>>>>>E2Fc                           --------->LBD16             <---------MYB55(2)      >>>>>>>>>E2Fd                         <---------LBD16   <-------             <---------MYB111(2)    ------>NtERF2                      <---------ZAT2<---------ANAC58             --------->MYB46(3)     --------->LBD16                   --------->ANAC58    <---------TOE1(3)        --------->ANAC58           --------->ANAC58                   --------->ANAC58    <---------TOE2(3)        --------->ANAC46           --------->ANAC58                --------->WRKY18(1)<----------DOF2        --------->ANAC58           --------->ANAC46             <-------TEIL<---------DEAR3(1) <----- <---------At4g35610            --------->ARR14(2)           <---------At4g35610 <-------GAMYB <----- -------At4g35610--------->TOE2(3)--------->MYB46(3)         --------->At4g35610<---------MYB46(3)  - --->At4g35610------->GAMYB     <---------ARR14(2)      <----------DOF2--------->ZAT2<---------ANAC58   tgcagataataagcaacaaccttagccaaaaccagacccgccaaaacgagacattcgcctttgagcttcgtcaagctcgcggcgtttgcgttaaggttgg  1056800                     <---------KAN4(1)                    <---------KAN4(2)                  --------->At4g35610         --------->DEAR3(1)                         --------->ZAT2        --------->ATERF1(1)                         <---------ZAT2                                ---        <------NtERF2--------->KAN4(1)     ------->GAMYB                                         ---- -P  <------ZmHOX2a(1) --------->GLK1(2)----------->RAV1(1)    --------->ANAC58         <---------YAB1 -MYB46(1)    --------->TOE1(2)--------->DAG2       --------->At4g35610              --------->GLK1(2) -MYB83--------->At4g35610    ---------->DOF2       <---------At4g35610  <------ZmHOX2a(1)       <--- ---------->HVH21 <------ZmHOX2a(1)     --------->MYB52(1)     --------->ANAC58     <---------GLK1(2)   aagtgaaggagccgagcctaggaacaatctgagaaagcgagacaacagagacacagctgcagagccagccaagtaggacggttttagattccgattgaag  1056900                                                                                          <---------ANAC46                                                                                         <---------HSFB2a(2)                                                                                         <---------LBD16                                                                                      --------->ARR11(3)                                                                              --------->At4g35610              <---------ANAC46                                              <---------GLK1(2)     <-- ----------->GT1                                             <---------At4g35610      <---------ARR11(3) ------>CCA1(2)                                <---------ANAC46          <---------HSFB2a(2)     <--- ----->ARR14(2)                      <-------GAMYB  ----------->HVH21    --------->HSFB2a(2)    <---- ------ARR14(2)      <----------DOF2<-----------RAV1(1)      --------->At4g35610  ---------->DOF2----   atagggtttaatagtttcgagggcttttagtgaattgactgttgtattggctcggagacggagagcggagggtttacagaagctcaaaggtctcggagat  1057000                                                          <------ZmHOX2a(1)                                                     <---------DEAR3(1)                                                     --------->ALFIN1                                                     <---------ANAC46                                                    <---------LBD16                                                    --------->At4g35610                                                    <---------At4g35610                                                    <---------ABI4(1)                                                    <------NtERF2               --------->ALFIN1                                                    --------->ATERF1(1)        <------NtERF2                                                   <---------ATERF1(1)       <---------DEAR3(1)                                                   <---------ERF1            <---------ANAC46                                                   <---------RRTF1(1)       <---------ABI4(1)                                                   <---------RAP2.6(1)      --------->ATERF1(1)                                                   <---------RAP2.3(1)     ------>NtERF2                                                   <---------ORA47(2)      <---------ATERF1(1)                                                   ------>NtERF2           <---------RAP2.6(1)                                                  <---------RRTF1(2)       <---------RRTF1(1)                                                  <---------DEAR3(1)       <---------ERF1                                                  --------->DEAR3(1)       <---------RAP2.3(1)                                                  <---------ATERF1(2)      <---------ORA47(2)                                                  <---------RAP2.3(2)      <---------DEAR4(2)                                                  <---------RAP2.6(2)     <---------RAP2.3(3)                                                  --------->ATERF1(2)     <---------RAP2.3(2)                                                  <---------RRTF1(3)      <---------RAP2.6(2)                                                  <---------RAP2.3(3)     <---------RRTF1(3)                                                  <---------ANAC46        <---------DREB2C(2)                                                  --------->ALFIN1        <---------RRTF1(2)                                                 --------->RAP2.3(1)      <---------DEAR3(1)                                                 --------->ATERF1(1)      <---------ATERF1(2)                                                 <---------ABI4(1)        --------->DEAR3(1)                                                <---------RAP2.3(1)      <---------ABI4(1)                                    <---------DEAR3(1) <------NtERF2    <---------ATERF1(1)                                  --------->LBD16<------NtERF2--------->YAB1<------NtERF2                                  ------>NtERF2<---------RAP2.3(2)     <---------O2                                 <---------DEAR3(1)<---------DEAR4(2)  --------->ANAC58                             <---------GLK1(1) <---------DEAR3(1)      --------->ANAC46                             <---------At4g35610<---------RRTF1(1)     --------->ANAC58        ------->TEIL         --------->At4g35610<---------ATERF1(1)    <---------DEAR3(1) -----GAMYB                  --------->ZAT2    <---------RAP2.6(2)     --------->TGA1a         ------ ------MYB46(3)             ----------->ARR10  <---------RRTF1(3)      --------->O2      <------ZmHOX2a(1) -----AtMYB61           --------->CCA1(2)    --------->MYB52(1)        <---------TGA1a  ----------->GT1 ------->GT1     ---------->DOF2<---------LBD16<---------RRTF1(2) ----------->ARR10   <------ZmHOX2a(1)   ggttgaaatggatgtttgagaaagagagatgagctccggcgatgagatagcggcggcggaggaatgagaagacacggcggcggtgttaggaggagaaatg  1057100                                                                                 --------->TOE1(3)                                                                                 <---------MYB59                                                                                 --------->TOE2(3)                                                                               ------->TEIL                                                                       *TSS   ------>MYB83                                                                     ----------->RAV1(2)                                                                     --------->At4g35610                                                              <---------YAB1  ------>MYB46(1)                                                              --------->ICU4<---------MYB59                   <---------AHL20(2)                       --------->YAB1 --------->DEAR3(2)                  --------->AHL20(2)                     ----------->GT1  ------->TEIL ----->HVH21      <---------AHL20(2)               <---------YAB1    <---------At4g35610        -----   acatttctctccaaaacaaatttaatcgaaccaaaacgaatcaacttctaattctaattcggtgataattcttctgaaccgaacctaaacccgaacattt  1057200                            <----------DOF2                         ------>NtERF2                     <-----------ARR10                    ------>ZmHOX2a(2)                      --------->ARR11(3)                   --------->CCA1(2)                       <---------ARR11(3)                   <------ZmHOX2a(2)                   ----------->RAV1(2)                  <---------ARR14(2)                  ------>MYB83                  <---------ARR11(3)                  -------->P    --------->ANAC58                  --------->AGP1                      ------>MYB46(1)        <--------P  ------------                  --------->ARR14(2)                 <---------ALFIN1      ----------->GT1                  <---------AGP1                 ------>NtERF2      <---------ANAC55(2)  ------->GAMYB  <------------CBF--------->ARR11(3)          --------->LBD16       --------->ANAC58  <-----------GT1 ----->DOF2     ----------->ARR10            --------->ANAC46------>ZmHOX2a(2)<-------TEIL   aagcgattgctaagaagtaagatctgaggcctttatgagtttaatacccgaggcccaacctgatcttatcaagtaagaggttgatatttaaccccaaata  1057300                    --------->AHL20(1)                    <---------AHL20(1)                    <---------AHL20(2)                    --------->AHL20(2)                   --------->AHL20(2)    <----------DOF2<---------AHL20(2) <-----------GT1<---------AHL20(2)        --------->ANAC46                                  <-------- --->AGL15     --------->AHL20(2)  <---------YAB1                                           ---------   gttttactttacaactattaaataaattttaaaactcattatacacactatattgaatatttcaagagatttatagtttttggtagaaaaacatttaaac  1057400        <---------AHL20(2)                    --------->MYB52(2)                           ----------       <---------MYB52(1)                  <----------DOF2                            --------->MYB59 -AHL20(2)              --------->AHL20(2) --------->TOE2(3) --------->ARR11(3)       <---------TOE2(3) >AHL20(2)    <---------YAB1            <-----------GT1----------->GT1     ------->TEIL   <-------TEIL   taaatttcagttaattttgtttgcaatttaaaacgtttcgattaactttagttgaaattgtaacatattgatatatgtattttagatttaggttcgtaac  1057500                            --------->AHL20(2)                            -------->HAHB4               <---------ALFIN1               --------->DEAR3(1)               --------->AtMYB61                                                 <-------GAMYB              --------->MYB46(3)                                                --------->MYB52(2)           <-------TEIL     --------->YAB1                                      <---------MYB46(3)  <---------MYB46(3)       <---------YAB1                               --------->DAG2 --------->ALFIN1        --------->YAB1          --------->YAB1        ---------->DOF2 <---------ANAC46     --------->YAB1        --------->ICU4          --------->At5g28300 ->GT1 <---------AtMYB61<---------YAB1      <---------YAB1         ----------->GT1            -------   atggtgggagaggtccaccacctagtataattatagagcaaatgtcatgaataagaagttgtttcaaaactgtaaaagtagtttgttgacacaaatgaaa  1057600                                             <---------AHL20(2)                                            --------->AHL20(2)       ----------->GT1                      <---------AHL20(2)     <---------ATHB12           <---------ANAC46 --->DOF2              ------->TEIL        --------->YAB1                               --------->AHL20(2)   gtttacaatcagttaataacatatgtattttgttttgtgagagaattttaatttagtttgaaataactcagagaataaatctaattagataaaaatatgt  1057700  Previous    Next  AGI:  At5g03910.1    Description:  ATATH12 (Arabidopsis ABC transporter homolog 12); ATPase, coupled to transmembrane movement of substances. Identical to ABC2 homolog 12 (ATH12) [Arabidopsis Thaliana] (GB:Q9LZB8;GB:Q56WM5;GB:Q9FFM7); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT3G28345.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15897.1); contains InterPro domain ABC transporter, transmembrane region, type 1; (InterPro:IPR011527); contains InterPro domain ABC transporter, transmembrane region; (InterPro:IPR001140); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain AAA+ ATPase, core; Range:  from: 1054077    to: 1057171    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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