Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          >>>>>>>>>TBF1                                                                               >>>>>>>>>TBF1                                                                            >>>>>>>>>TBF1      --------->GLK1(2)                         --------->YAB1       ---------->DOF2 >>>>>>>>>TBF1     <---------GLK1(2)            ---------->DOF2               --------->MYB52(1)>>>>>>>>>TBF1   gtttcaagaatctatacaaaatggttttggtcatcaaaaagattacagaaacataaaaacaaaacaaaactgaaagaagaagaagaagaagaagaatgag  973300                                                                ----------->GT1                                                             <---------At4g35610                                                             --------->At4g35610                                          <---------ZAT6     <---------ZAT2                                    <---------ANAC55(2)      --------->ZAT2                                    --------->ANAC55(2)     ------->TEIL                               --------->ATHB12             --------->GLK1(2)            <---------ANAC58                               <---------ICU4         ----------->TGA1                   <---------ANAC58                              <---------YAB1          ----------->HVH21                  <---------ANAC46   <---------HSFB2a(2)        --------->ICU4    --------->At4g35610          <---------ANAC46   --------->HSFB2a(2)      <---------At4g35610 <---------At4g35610          <---------YAB1        <-   tctatctagaaaacagaaacagagcaagagagatgattacataagtgttaagctgtctgacgaagctggagaaattgttgtgtttgaaattccttggaag  973400                                    --------->ZAT2                                   ------->TEIL                                                  ----                                --------->ANAC46                                               ------                             --------->TOE1(2)<---------MYB52(1)      --------->WRKY18(1)     <------                       ------>ZmHOX2a(2)      <-----------HVH21      <-----------HVH21      ------>MYB46(1)                      <------ZmHOX2a(2)      --------->LBD16       --------->LBD16          ------>MYB83                     --------->ARR14(2)    <---------LBD16       <---------LBD16          --------->AtMYB61                     <---------ARR11(3) <---------At4g35610   ----------->HVH21           ------->GAMYB                     <---------ARR14(2) --------->ZAT2        --------->WRKY38(1)       -------->P                     --------->ARR11(3) --------->At4g35610 --------->At4g35610        --------->WOX13(1) --------YAB1       <------ZmHOX2a(1)   <---------ZAT2      --------->CCA1(2)         --------->MYB46(3)   tatgattctggcaaactctagaggatcccaaactacgaagctagctccggtcagtccccaagagatgaccgggtcaagagtcgggtcatcaaccaaatca  973500                                                                                        <---------ETT(2)                                                                                        --------->ETT(2)                                       <---------ARR11(3)                       <-----------HVH21                           <---------GLK1(1)                  ----------->HVH21--------->bZIP60(2)                          <---------GLK1(2)       <---------ANAC58             --------->TGA1a ------>DOF2              --------->ARR14(2)      <---------ANAC58       --------->GLK1(1) --->YAB1     --------->DAG2           --------->ARR11(3)  --------->ALFIN1    --------->O2<---------ANAC46 ---ATHB12  ---------->DOF2--------->GLK1(1)      <---------ANAC46  --------->LBD16   --------->REM1(2)   aaagtcttggataaaaaaggtggaattggattcccttgtaagatgtctagtggcatgggaagtggtgacccagagaaacccatgtcagtgtcgacgtaga  973600                            <---------------AtSPL3                            <---------------AtSPL8                         --------->MYB52(1)                     <---------HSFB2a(2)              XXXXXXXXXXXXXXXXXXXXX>MIR447C                <------ZmHOX2a(2)              <------MYB46(1)                                     <-               <-----------ARR10               <------MYB83     <----------DOF2                    --               --------->ARR14(2)<-----------------AGL3      <---------ARR11(3)                   <--               <---------ARR14(2)================================================MADS_MADS       <---    --------->LBD16  --------->HSFB2a(2)      <---------AtMYB61<-----------------AGL3            ----  <---------LBD16------>ZmHOX2a(2)           <--------P     <---------GLK1(2)         ----------->GT1   gagacccgggtatatcggatcgtctcgaaacgggtactgaaattggagttggtttagaaacagcatctttttttgggctcatttgatatagtagaaaatt  973700                                            <---------ICU4                                           --------->ICU4                                    <---------ANAC58                                    <---------ANAC46                                    --------->ALFIN1                                    <---------ANAC58                                  --------->ALFIN1                                  <---------ANAC58         <---------ZAT6           <---------ANAC58 --------ANAC46                   <---------ANAC46 ------->ANAC55(2)              <---------ANAC46                                            <-------- -------LBD16                   <---------ANAC58                                   ----------->GT1 --------GT1                    <---------ANAC58                           ----------->GT1---------->DOF2 ----->MYB52(1)            <------------CBF<---------YAB1           <------ZmHOX2a(1)  <-----------TBP   tacgggttttagtgagagagagagtgagaaattggggtgtgtgtgataattagggggtttaagagaagaaggatgagaggtttaatggtttataaaggtt  973800                                                                                            ---------                                                                                         <---------ALFIN1                                                                                       <---------ATERF1(1)                                                                                       ------>NtERF2                                                                                       --------->LBD16                                                                                      --------->ANAC46                                                                                      --------->ANAC58                                                                                      --------->ANAC58                                                                           --------->MYB55(2)                                                                           <---------MYB46(3)--------                                                                          --------->ALFIN1------>NtERF2                      <---------ZAT14                                   <---------ANAC58 --------->DEAR3(1)                      --------->ZAT14                                   <---------ANAC58----------->HVH21                  --------->MYB52(1)           <---------LBD16  --------->ALFIN1     <---------LBD16             <---------ETT(1)                  --------->LBD16 <-------GAMYB<------MYB46(1) <--------             --------->DREB2C(2)           --------->GLK1(2)   <------NtERF2<------MYB83--------->MYB46(3)             ------->GAMYB                 --------->ARR11(3) <---------ORA47(2) --------->At4g35610             <----------ID1                <---------ARR14(2) <---------MYB46(3) <---------At4g35610            <------------AtMYB77           --------->ARR14(2)<---------DEAR3(1) --------->MYB52(2)            --------->DEAR3(2)            --------->RVE1(1)  <---------DREB2C(2)<---------DEAR3(2)            --------->MYB46(3)   <------------CBF            --------->ALFIN1<-----------HVH21 -TOE2(3) --------->MYB52(1) <---------At4g35610            <---------ABI4(1)<---------PCF2<------NtERF2   tagggaaggaagtaaccgacaaactgtagtcagataattgaaaaaaatctggggaatagagaggcggtggaaatgggtgggtcagttcccgccaccgtgg  973900                                                                                 ----------->RAV1(1)                                                                                --------->DREB2C(2)                                                                                ------->GAMYB                                                                                --------->At1g77200                                                                                --------->DEAR4(1)                                                                      <------------CBF                                                                     -------->HAHB4                                                                     <--------ATHB1                                                                     <---------ICU4                                                                     --------->ATHB51                                                                    <---------ATHB12                                                                    --------->ICU4               <---------ICU4                                       <---------AHL20(2)    <----------DOF2                                                 --------->AHL20(2) <-----------GT1         <---------ATHB12               <----------DOF2         ----------->HVH21 >DEAR3(1)    --------->ICU4                            --------->TOE2(3)      --------->DEAR3(2) ->LBD16  <-----------TGA1   <-------TEIL      >>>>>>>>>CBP60g      <---------ATHB51          ------- -ANAC46---------->ID1 <------------CBF        >>>>>>>>>SARD1<---------ZAT6    --------->MYB46(3)   atttatctttttcgtcatcatgttccattgattcatcagtttagaagaaatttggaaactttagtgacaaataattgtacaaccgacattgaaattgaaa  974000                                                                                --------->TGA2(2)                                                                               <-----------TGA1                                                                               <-----------HVH21                                                                              --------->ANAC58                                                                              --------->ANAC58                                                                              --------->ANAC46                                                                              --------->ANAC55(1)                                                                              =======================                                                                              <---------O2                                                                              --------->bZIP60(2)                                                                              --------->O2                                                                              --------->TGA1a                                                                              --------->bZIP60(1)                                                                              <---------TGA1a                                                                             <-----------STF1                                                                         <---------TCP15(1)                                                                         --------->PCF2                                                                        <-----------HVH21                                                                        --------->TCP20                                                                        --------->TCP15(1)                                                                        <---------PCF2                                                                       <---------DEAR3(2)                                                                       <------MYB83                                                                       <------MYB46(1)                                                                       <---------TCP15(2)                                                                      <---------MYB46(3)                                                                      --------->MYB55(2)                                                                   <---------MYB46(3)                                                            ----------->TGA1<---------ALFIN1                                                      --------->DAG2 <---------ANAC46           --------->At4g35610                       ===================================bZIP_DOF     <---------ANAC58                           <------ZmHOX2a(1) <---------AtMYB61              ====     <---------ANAC58--------->At4g35610   <---------REM1(1)----------->HVH21<---------TOE1(2)   ----  <-----------GT1    <---------At4g35610 <------MYB46(1) --------->ALFIN1<---------TCP20  <---------ARR11(3) --->DOF2  <---------At4g35610           <------MYB83---------->DOF2 --------->ALFIN1     --------->ARR11(3)   gttgtttccttgcagcttcacttagctctctctctctgtgatttggtgaaggagagaaagtggtgacgatggtgggtcccacgtcatcttgagatttttg  974100                                   <-----------------AGL1                               <---------At4g35610                               <---------ZAT2                                          <---------DAG2                               --------->ZAT2                                          <----------DOF2                             <---------WRKY12                                         ---------------                           <-----------HVH21                                          <--------------                          --------->bZIP60(2)                                      <-----------GT1                          --------->TGA1a                                     <---------ANAC46                          --------->O2                                        <---------ANAC58     ----------->GT1      <---------ZAT2           --------->PCF5         <----------DOF2          <-    <------ZmHOX2a(1)     ==================bZIP_DOF          <---------ATHB12<---------ANAC58    --- =======bZIP_DOF<---------ZAT18--------->At4g35610 --------->PCF2         <---------DAG2          <-- ===================================bZIP_DOF       <---------ZAT18    <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ------>DOF2 <---------At5g28300 <----------DOF2   <---------PCF2   <---------GLK1(2)----------------   aaaggaggagtgatttagcgcgtttgccaggtcagctttctaatttggaactgggccctcacaaatcactgattcgcttttcgtgtttcctttttcagaa  974200  Previous    Next  AGI:  At5g03720.1    Description:  AT-HSFA3 (Arabidopsis thaliana heat shock transcription factor A3); DNA binding / transcription factor. Identical to Heat stress transcription factor A-3 (HSFA3) [Arabidopsis Thaliana] (GB:Q8GYY1;GB:Q9LZR6); similar to ATHSFA1D (Arabidopsis thaliana heat shock transcription factor A1D), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G32330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15967.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232) Range:  from: 971785    to: 973682    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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