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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-
--
--------->
MYB52(1)
--
<------
NtERF2
----------->
RAV1(1)
------
<---------
ZAT18
--------->
ETT(1)
--------->
AHL20(2)
<-------
--------->
ZAT18
<-----------
HVH21
<---------
ZAT18
<-----------
GT1
--------
<-------
TEIL
<-----------
RAV1(1)
--------->
ZAT18
<----------
DOF2
<---------
TOE2(3)
------------------
WRI1
<---------
ANAC46
<---------
ZAT14
<---------
ZAT18
<---------
TOE1(3)
-->
ATHB12
<---------
TOE2(3)
--------->
ZAT14
------->
GAMYB
---------->
DOF2
tagatgcgcacaaggttgagattgtgtcggagagttgtgagagtgagttcactaaataa
aacaacagcgagctttattacttctcatgtaaaggtttgtt
18438700
<-----------
HVH21
----------->
HVH21
--------
At4g35610
------->
At4g35610
---->
ZmHOX2a(1)
<----------
DOF2
---->
ID1
<---------
At4g35610
<-----------
GT1
---------->
DOF2
--
MYB46(3)
<-----------
GT1
<----------
DOF2
--------->
TOE2(3)
<----------
DOF2
->
MYB52(2)
<----------
DOF2
<-----------
GT1
<-------
TEIL
<-------
TEIL
--------->
ATHB12
cctctgactgtcatatgcttttttcttttgttttaacttttacatgttaatgtgtgatacatcaaagacgttcaaaatttctttattgaagatgctctgt
18438800
<---------
AHL20(2)
--------->
AHL20(2)
--------->
ALFIN1
<---------
ALFIN1
-
<---------------
AtSPL8
<-----------
GT1
X
<------
MYB83
<---------
AHL20(2)
---
<------
MYB46(1)
<---------
AHL20(1)
<-----------------
AGL3
<--------
--------->
MYB111(2)
<---------
AHL20(2)
--------->
ANAC55(2)
<--------
--------->
ARR11(3)
--------->
AHL20(1)
=========================================
<---------
REM1(1)
----------->
GT1
--------->
ANAC46
<---------
AHL20(2)
<---------
<---------
TOE2(3)
<----------
DOF2
--------->
AHL20(2)
<-----------
GT1
<-----------
GT1
-----
ttttgatgtaagagctaggtggtactttgtaatctgtaatttatttccacccgatttattttacttaatttgagaccaaaataacatgtttgaatgtgta
18438900
--------->
LBD16
<---------
LBD16
----------->
HVH21
-------->
WRKY18(1)
<---------
ANAC46
XXXXXXXXXXXXXXXXXXX>
MIR169G*
<----------
DOF2
<------
ZmHOX2a(2)
----
-------->
GT1
--------->
MYB52(1)
<---------
ARR11(3)
<---
-------
AtSPL3
----------->
HVH21
---------->
DOF2
--------->
ARR11(3)
----------->
GT1
-------
AtSPL8
<---------
SPL7
--------------->
AGL15
--------->
TOE2(3)
-------
===============================================================
MADS_MADS
--------->
AHL20(2)
<----
---------
SPL14
<---------
ANAC58
=====================================================
---->
SPL7
<---------
ANAC58
<---------------
AGL15
<---------
ANAC55(2)
<--------
cggtcaaactgaccttggcttacggggttctctttcactgttttttttttctctaaaggggtcgagtagatcacctaaatgaaatagaggggttatttat
18439000
---------->
DOF2
--------->
DAG2
--------->
AHL20(1)
----------->
GT1
<---------
AHL20(1)
<---------
ANAC55(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
----->
AHL20(2)
<----------
ID1
<---------
AHL20(2)
------
AHL20(2)
----------->
GT1
--------->
AHL20(2)
-
-->
YAB1
<---------------
AtSPL8
<---------
AHL20(2)
-
-----------
AGL15
<-------
TEIL
--------->
AHL20(2)
----------------->
AGL1
--
===========
MADS_MADS
<---------
ANAC58
<---------
AHL20(2)
<---
---
TBP
---------->
DOF2
<---------
ANAC58
----------->
TBP
----------->
GT1
<---------
ANAC46
aaattaagtaaaataaaaggtacaaatgctgacctagtcgtgtttaattaaatatataaagtccaaaatcgaaaaacactctccatcgactctcgtgttt
18439100
--------->
LBD16
=====================
bZIP_DOF
---------->
DOF2
<---------
HSFB2a(2)
--------->
ZAT14
--------->
HSFB2a(2)
--------->
LBD16
<---------
ANAC58
----------->
RAV1(1)
<---------
ANAC46
--------->
DEAR3(1)
<---------
ANAC58
<---------
RAP2.6(3)
--------->
ANAC46
--------->
LBD16
------>
NtERF2
<---------
ALFIN1
--------->
At4g35610
--------->
AHL20(2)
--------->
RAP2.6(2)
--------->
DEAR3(1)
<---------
ANAC58
-------->
TOE2(3)
<---------
At4g35610
--------->
AtMYB61
<---------
TGA1a
-------->
TOE1(3)
<---------
At4g35610
<---------
MYB55(2)
<---------
O2
<---------
GLK1(2)
------->
ZAT6
--------->
At4g35610
--------->
MYB46(3)
<---------
ANAC58
--------
GT1
----------->
RAV1(2)
--------->
DEAR3(2)
--------->
At4g35610
aaccctaatttcaaaaacgtcgtctgccgct
atgagttctgaagtcgaaccaccgcagaaaaagaagcagccgtggcttccagattatatcgttgagaac
18439200
--------->
LBD16
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
<---------
HSFB2a(2)
--------->
HSFB2a(2)
-------->
P
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
AGP1
<---------
ARR14(2)
--------->
ARR14(2)
<---------
ARR11(3)
--------->
At4g35610
--------->
ARR14(3)
---------->
DOF2
<---------
ARR14(3)
---------->
DOF2
--------->
ARR11(3)
<---------
ARR14(2)
<---------
ZAT18
<-----------
GT1
<----------
DOF2
<---------
CCA1(2)
---------->
DOF2
<---------
At4g35610
--------->
MYB52(1)
------>
ZmHOX2a(1)
--------->
ARR14(2)
--------->
ZAT18
tgtttagcacacatatcgagatcttactacccgaaactctccctagtctcaagtcctttcgctctctcgtcgtatccaaagagctcaacaaagcgcgata
18439300
--------->
At4g35610
<---------
At4g35610
--------->
O2
--------->
At4g35610
------->
GAMYB
===========================================
MYC_MYB
============================
MYC_MYB
--------->
ANAC58
--------->
MYB52(1)
--------->
bZIP60(2)
<---------
ALFIN1
------->
GAMYB
<---------
TGA1a
--------->
TOE1(1)
<--
===============================
MYC_MYB
------>
MYB83
---
<---------
MYB55(2)
--------->
TGA1a
-------->
P
--------->
ANAC58
<----
--------->
MYB46(3)
--------->
ANAC46
------>
ZmHOX2a(1)
--------->
ANAC46
------
<---------
MYB111(2)
<---------
O2
<---------
At4g35610
------>
MYB46(1)
----------->
GT1
<-----
<---------
MYB52(2)
<---------
ALFIN1
------>
ZmHOX2a(1)
----------->
RAV1(2)
------
tcgcctcaacaaccgaagaatacttcttccacgtctgcttacagcttcctaagagtcctcttccaacctggtacacgctctggataaaacctgatcagat
18439400
----------->
GT1
<------
MYB83
<------
MYB46(1)
<---------
AtMYB61
--------->
MYB46(2)
--------->
MYB111(1)
--------->
MYB111(2)
------>
ZmHOX2a(1)
>>>>>>>>>
TBF1
--------->
MYB55(2)
<---------
YAB1
>>>>>>>>>
TBF1
<--------
P
<---------
YAB1
-------
HSFB2a(2)
<---------
MYB52(1)
<---------
ICU4
------>
HSFB2a(2)
<---------
MYB55(1)
<--------
HAHB4
--
ZmHOX2a(2)
<-------
GAMYB
--------->
YAB1
<--
--->
ARR14(2)
<---------
HSFB2a(2)
<---------
ATHB12
--------->
TOE2(3)
----
ARR14(2)
--------->
HSFB2a(2)
<---------
YAB1
<---------
--->
AGP1
--------->
DOF5.7(2)
<---------
MYB46(3)
------>
ZmHOX2a(1)
<---------
ZAT6
<---
cgagaagaagaagaagattaatacgtttactggaaatactcggttggtacaaataccatcttcctatcattatccttttgaccaagtgttcatctttaat
18439500
--------->
ANAC58
<------
MYB83
<------
MYB46(1)
--------->
MYB111(1)
--------->
SPL7
--------->
MYB111(2)
<---------
SPL7
<---------
MYB46(3)
<---------
ANAC58
<---------
AtMYB61
<----
--------->
ANAC58
--------->
MYB46(2)
<-------
--------->
ANAC58
--------->
MYB59
--------->
ATHB12
<-----------
RAV1(1)
--------->
ANAC46
<-----------
HVH21
<---------
MYB52(1)
--------
DOF2
<-------
TEIL
<---------
ANAC58
<--------
P
<-------
GAMYB
-
DOF2
<---------
ANAC58
--------->
SPL7
<---------
MYB55(1)
<------
NtERF2
<----
------
ICU4
<---------
ANAC58
--------------->
AtSPL8
--------->
ANAC58
<---------
DEAR3(1)
<-
ctttatggtgctatgcgttcatccaaggcaatggtccgtcccccttcatatgggttggtaagcatgttttga
atagaactcgtcgtcgttgtttgattga
18439600
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AGI:
At4g39745.1
Description:
hydroxyproline-rich glycoprotein family protein. similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT2G22180.1)
Range:
from: 18437800
to: 18438659
Orientation: Forward
Links:
TAIR
MIPS
AGI:
At4g39750.1
Description:
F-box family protein-related. Identical to Uncharacterized protein At4g39750 [Arabidopsis Thaliana] (GB:Q3E9N2;GB:Q9LDK6); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT4G39753.1)
Range:
from: 18439132
to: 18439572
Orientation: Forward
Links:
TAIR
MIPS
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when using AthaMap.
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