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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                   --------->MYB52(1)
                --------->ANAC58
                --------->ANAC46
                --------->ANAC58
              --------->ZAT6
              <---------ALFIN1
             ------>MYB46(1)                                                                      --
             -------->P                                                                       ------
             ------>MYB83                                        --------->At4g35610      --------->ATHB51
            ----------->RAV1(1)     ---------->DOF2            <---------ICU4             --------->ATHB12
           --------->AtMYB61    --------->At4g35610         --------->YAB1  --------->ANAC58 <------
          --------->MYB46(3)    <---------At4g35610         <---------ICU4  --------->ANAC58<-------
 
tcaaacttcagaaaccaacactcaacgaattcttaagcagaaagacaatctcatacttgtgaatcatcatctccaaaacaagctctgtttgcataattga  17312100
                                  --------->ANAC58
                                  --------->AtLEC2
                                  --------->ANAC46
                               <-------TEIL
-------->DOF2              ----------->GT1                                   --------->DAG2
--->ATHB12              --------->GLK1(2) --------->ALFIN1                  ---------->DOF2
---AHL20(2)          ------->GAMYB--------->ANAC58              --------->AHL20(2)           -------
--WOX13(1)        ----------->RAV1(1)---------->DOF2            <---------AHL20(2)     --------->YAB1
 
ttaaagaattcaattcaagtacaacagaatcagttacatgcaaaggtgtttgtttgcatatgagaaattaaacgagagaaaaagttagaataaaaacaga  17312200
                                                                            ----------->RAV1(1)
                                                                            <-----------HVH21
                                                                            ------>NtERF2
                                                                           ----------->HVH21
                                                                           <---------ETT(1)
                                                                  --------->TGA1a
                                                                  --------->O2
                                                                  <---------TGA1a
                                                                  --------->ANAC46
                                                                  --------->bZIP60(2)
                                                                  --------->ANAC55(2)
                                                                  --------->ANAC58                --
                                                                <---------ALFIN1                  <-
                               --------->ALFIN1               ------>NtERF2--------->ANAC46      ---
                       --------->DAG2              <---------YAB1 --------->ANAC58              ----
                      --------->ZAT14             <---------AHL20(2)   ==================HOX2a_HOX2a
             <---------YAB1  <---------bZIP60(2)  --------->AHL20(2)   ------>ZmHOX2a(1)        ----
         <---------GLK1(2)   <---------ANAC46 <------ZmHOX2a(1)<---------REM1(2)                <---
        <---------ZAT2<---------ZAT14    <---------ZAT2       <---------RAP2.6(3)             <-----
---->GT1--------->ZAT2---------->DOF2    --------->ZAT2      <---------ETT(1)     <------ZmHOX2a(2)-
 
gaaaacagaccagcttctaattgagtaaagtgatgtggaagtccagctaggattttaatagatgccgacacgtcctctccgacagatcagacaaaactcc  17312300
      >>>>>>>>>TBF1
  --------->LBD16
<------NtERF2
------->ARR14(2)                                                                             <------
--------ARR14(2)                                                             <-----------HVH21
------>ATERF1(1)                                            <---------At4g35610--------->ETT(1)
-->NtERF2                                   <---------TOE2(3)               <-----------RAV1(1)
----->LBD16                                 <---------TOE1(3)    <----------DOF2 <------NtERF2
------ATERF1(1)                          <<<<<<<<<MYB98    <-----------RAV1(1) <---------ANAC46
----LBD16>>>>>>>>>TBF1     <---------MYB52(1)           <----------DOF2  ------->TEIL      ---------
----->NtERF2  ----------->GT1       <----------DOF2<-----------GT1 --------->ATHB12       <---------YAB1
 
ggctccgaagaagaagaagattaaaactccgattgtttacttttgttagggttttatctcttttgctgcttcattgaatctgtcggagagtttttgattg  17312400
                                              <---------ANAC46
                                              --------->ALFIN1
                                           <-----------RAV1(1)
                                          ------>ZmHOX2a(2)
                                          =============================HOX2a_HOX2a
                                         ==============================HOX2a_HOX2a
                                         <------ZmHOX2a(2)
                                         =================================HOX2a_HOX2a
                                        --------->ARR14(2)
                                        <---------ARR14(2)
                                    <-----------GT1
                                 <---------HSFB2a(1)
                          --------->ARR14(2)  <---------ANAC58
                          <---------ARR14(2)  <---------ANAC58
                         <------ZmHOX2a(1)================================HOX2a_HOX2a
                         ========================HOX2a_HOX2a
  <---------------------WRI1     --------->HSFB2a(1)
 ----------->GT1   ---------->DOF2 <-----------GT1              <------ZmHOX2a(1)          *TSS
---WOX13(1)  ---------->DOF2     <----------TaMYB80 ---------->DOF2<------ZmHOX2a(1)    <------ZmHOX2a(1)
>ATHB12  <----------ID1  =======================HOX2a_HOX2a <---------MYB52(1)    ---------->DOF2
 
aagatagcaaaaaaaacaaaggaaaagaggattgggattttccgatctggtgtggcaaagtccgataggaggagaagaatgcgaagaaagaggaaagttt  17312500
                                              ------------>CBF
                                             ==========================RAV
                                             ----------->RAV1(1)
                                            ----------->HVH21
                                           --------->SPL7
                                          --------->ALFIN1
                                         ------->PIF5
                                         <-------PIF5
                                         ------->PIF4
                                         --------->TOE1(2)
                                         ------->MYC3                     <-----------GT1
                                         ------->MYC4                   <-----------HVH21
                                         <-------MYC3                 ------->MYC2
                                         <-------PIF4                 <-------MYC4
                                         ------->MYC2                 ------->MYC4
                                         <-------MYC2                 <-------MYC2
                                         <-------MYC4                 ------->MYC3
                                        <---------TGA1a              --------->O2
                                        --------->TGA1a              <---------TGA1a
                                        <---------ANAC55(2)          <---------ANAC55(2)
                                        <---------O2                 --------->ANAC55(2)
                                      <------------OsbHLH66          <---------O2                  -
                                    <-----------HVH21                --------->TGA1a               <
                                   ----------->HVH21                 ===============================
                                  ------>ZmHOX2a(2)               <---------REM1(2)             ----
                                 <---------At4g35610         <---------ZAT2                   ------
                      <---------TOE2(3) --------->ANAC55(2)  <---------At4g35610              ------
              <---------AHL20(2) --------->At4g35610         --------->At4g35610         -----------
             --------->AHL20(2) <---------ARR11(3)           --------->ZAT2        --------->DAG2<--
             <---------AHL20(2) --------->ARR11(3)         <-----------RAV1(2)     <---------TOE2(3)
    <----------DOF2   <---------TOE1(3) --------->O2    ----------------------->TaNAC69(2)    ------
    ==============================================bZIP_DOF<-------TEIL<-------MYC3 <---------TOE1(3)
 
tttttttctttgggattttaattttagggtttgatgatctgacacgtgcgacaatgagaggtccagctgtacacgtgttactggataaggttttgacacg  17312600
                                                                   <---------YAB1
                                                                 --------->ATHB51
                                                              <--------HAHB4
                                                              <---------ICU4
                                                             <---------YAB1
                                                            <-----------GT1
                                                       --------->AHL20(1)
                                                       <---------AHL20(1)
                                              <---------ARR11(3) <--------HAHB4
        <------MYB83                         ====================================HOX2a_HOX2a
        <------MYB46(1)                   --------->DAG2   --------->YAB1
-------->At4g35610                       ---------->DOF2  <---------YAB1
---------At4g35610                    --------->YAB1   <---------AHL20(2)
======MYC_MYB                        <---------ATHB12  --------->AHL20(2)
----->At5g28300                      <<<<<<<<<ARR2 <---------AHL20(2)     <------ZmHOX2a(2)  -------
--->ANAC46  ----------->HVH21   <-----------GT1--------->GLK1(1) --------->ATHB12          ------->TEIL
--->ANAC58<---------ANAC58      --------->YAB1--------->ARR14(2) <---------ICU4      <-------TEIL
>HVH21 <---------AtMYB61     <---------ICU4  <------ZmHOX2a(1)--------->YAB1     <---------------AtSPL8
------P<---------MYB46(3)   --------->AHL20(2)--------->ARR11(3)<---------YAB1  <---------AHL20(2)
--->ANAC58<---------ANAC58  <---------AHL20(2)<---------ARR14(2)--------->ICU4  --------->AHL20(2)
 
gtagctacagttggtgtgactcatctactcatttattacaatcaaaaaggatattcaatttattatcattattagcgatctaattaagtacatgaatatt  17312700
                    ----------->GT1
                   <---------TOE2(3)
            <---------AHL20(2)
           --------->AHL20(1)
           <---------AHL20(1)
           <---------AHL20(2)
           --------->ARR11(3)
           --------->AHL20(2)
           <---------ARR11(3)                                            <---------YAB1
      --------->AHL20(2)                         --------->YAB1<-----------GT1
     --------->AHL20(2)            <-----------HVH21  <-----------GT1<---------AHL20(2)
     <---------AHL20(2)           ------->GAMYB <---------ATHB12     --------->AHL20(2)    ---------
---->GT1  --------->AHL20(2)--------->YAB1  <---------YAB1 <----------DOF2    <---------AHL20(2)   <
 
aaaaacatttaaaatatattttgatgtaaattgataactgtcaaattgtcaatgataaaaccctttttacatttatatgatttttttttgtagataaaga  17312800
                                           --------->TOE2(3)
                                           --------->YAB1
                                          ----------->GT1                            --------->ANAC58
                                          <---------YAB1                             --------->ANAC58
                                       <---------AHL20(2)                       --------->MYB52(1)
                                    <---------ARR11(3)                   --------->ANAC46
                                    <---------AHL20(1)                   --------->ANAC58
                                    <---------AHL20(2)            <---------------AGL15
                                    --------->ARR11(3)            --------------->AGL15
     --------->TOE2(3)       <---------ZAT18       <---------ANAC46      --------->ANAC58---------->DOF2
   <-----------GT1           --------->ZAT18 <---------YAB1       <----------DOF2-------->P
->DOF2               <-------GAMYB  --------->AHL20(2)      <----------DOF2   <---------MYB52(2)
----------DOF2  <-----------GT1     --------->AHL20(1)      ----------------------->TaNAC69(2)
 
gtcttttttcttaattttgtttcccgttgtagtgcataatatattatgttaattgtttgtaatctttttctttaacaagaaactaaccaagtcaaagcta  17312900
                                                                           --------->AHL20(2)
         <---------AtLEC2                                                  <---------AHL20(2)
         <---------ANAC58                                               ----------->GT1
         <---------ANAC58                                      <---------TOE2(3)                   -
  <---------TOE1(2)      <-----------GT1  --------->AHL20(2)   <---------TOE1(3)          <---------MYB46(3)
 
ttttctaggtttgcatgtttgtgtcattttactgaaaaaaaaaaaaaaaatagtagtaagttttttaacgtagaatattaaaatttgctacagttgttga  17313000
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AGI:  At4g36730.1   
Description:  GBF1 (G-box binding factor 1); transcription factor. Identical to G-box-binding factor 1 (GBF1) [Arabidopsis Thaliana] (GB:P42774;GB:Q940I9;GB:Q944J1;GB:Q96263); similar to bZIP transcription factor family protein [Arabidopsis thaliana] (TAIR:AT2G35530.1); similar to G-box binding factor 1A [Brassica napus] (GB:CAA58774.1); contains InterPro domain G-box binding, MFMR; (InterPro:IPR012900); contains InterPro domain bZIP transcription factor, bZIP-1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827)
Range:  from: 17309616    to: 17312492    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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