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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
MYB52(1)
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
--------->
ZAT6
<---------
ALFIN1
------>
MYB46(1)
--
-------->
P
------
------>
MYB83
--------->
At4g35610
--------->
ATHB51
----------->
RAV1(1)
---------->
DOF2
<---------
ICU4
--------->
ATHB12
--------->
AtMYB61
--------->
At4g35610
--------->
YAB1
--------->
ANAC58
<------
--------->
MYB46(3)
<---------
At4g35610
<---------
ICU4
--------->
ANAC58
<-------
tcaaacttcagaaaccaacactcaacgaattcttaagcagaaagacaatctcatacttgtgaatcatcatctccaaaacaagctctgtttgcataattga
17312100
--------->
ANAC58
--------->
AtLEC2
--------->
ANAC46
<-------
TEIL
-------->
DOF2
----------->
GT1
--------->
DAG2
--->
ATHB12
--------->
GLK1(2)
--------->
ALFIN1
---------->
DOF2
---
AHL20(2)
------->
GAMYB
--------->
ANAC58
--------->
AHL20(2)
-------
--
WOX13(1)
----------->
RAV1(1)
---------->
DOF2
<---------
AHL20(2)
--------->
YAB1
ttaaagaattcaattcaagtacaacagaatcagttacatgcaaaggtgtttgtttgcatatgagaaattaaacgagagaaaaagttagaataaaaacaga
17312200
----------->
RAV1(1)
<-----------
HVH21
------>
NtERF2
----------->
HVH21
<---------
ETT(1)
--------->
TGA1a
--------->
O2
<---------
TGA1a
--------->
ANAC46
--------->
bZIP60(2)
--------->
ANAC55(2)
--------->
ANAC58
--
<---------
ALFIN1
<-
--------->
ALFIN1
------>
NtERF2
--------->
ANAC46
---
--------->
DAG2
<---------
YAB1
--------->
ANAC58
----
--------->
ZAT14
<---------
AHL20(2)
==================
HOX2a_HOX2a
<---------
YAB1
<---------
bZIP60(2)
--------->
AHL20(2)
------>
ZmHOX2a(1)
----
<---------
GLK1(2)
<---------
ANAC46
<------
ZmHOX2a(1)
<---------
REM1(2)
<---
<---------
ZAT2
<---------
ZAT14
<---------
ZAT2
<---------
RAP2.6(3)
<-----
---->
GT1
--------->
ZAT2
---------->
DOF2
--------->
ZAT2
<---------
ETT(1)
<------
ZmHOX2a(2)
-
gaaaacagac
cagcttctaattgagtaaagtgatgtggaagtccagctaggattttaatagatgccgacacgtcctctccgacagatcagacaaaactcc
17312300
>>>>>>>>>
TBF1
--------->
LBD16
<------
NtERF2
------->
ARR14(2)
<------
--------
ARR14(2)
<-----------
HVH21
------>
ATERF1(1)
<---------
At4g35610
--------->
ETT(1)
-->
NtERF2
<---------
TOE2(3)
<-----------
RAV1(1)
----->
LBD16
<---------
TOE1(3)
<----------
DOF2
<------
NtERF2
------
ATERF1(1)
<<<<<<<<<
MYB98
<-----------
RAV1(1)
<---------
ANAC46
----
LBD16
>>>>>>>>>
TBF1
<---------
MYB52(1)
<----------
DOF2
------->
TEIL
---------
----->
NtERF2
----------->
GT1
<----------
DOF2
<-----------
GT1
--------->
ATHB12
<---------
YAB1
ggctccgaagaagaagaagattaaaactccgattgtttacttttgttagggttttatctcttttgctgcttcattgaatctgtcggagagtttttgattg
17312400
<---------
ANAC46
--------->
ALFIN1
<-----------
RAV1(1)
------>
ZmHOX2a(2)
=============================
HOX2a_HOX2a
==============================
HOX2a_HOX2a
<------
ZmHOX2a(2)
=================================
HOX2a_HOX2a
--------->
ARR14(2)
<---------
ARR14(2)
<-----------
GT1
<---------
HSFB2a(1)
--------->
ARR14(2)
<---------
ANAC58
<---------
ARR14(2)
<---------
ANAC58
<------
ZmHOX2a(1)
================================
HOX2a_HOX2a
========================
HOX2a_HOX2a
<---------------------
WRI1
--------->
HSFB2a(1)
----------->
GT1
---------->
DOF2
<-----------
GT1
<------
ZmHOX2a(1)
*
TSS
---
WOX13(1)
---------->
DOF2
<----------
TaMYB80
---------->
DOF2
<------
ZmHOX2a(1)
<------
ZmHOX2a(1)
>
ATHB12
<----------
ID1
=======================
HOX2a_HOX2a
<---------
MYB52(1)
---------->
DOF2
aagatagcaaaaaaaacaaaggaaaagaggattgggattttccgatctggtgtggcaaagtccgataggaggagaagaatgcgaagaaagag
gaaagttt
17312500
------------>
CBF
==========================
RAV
----------->
RAV1(1)
----------->
HVH21
--------->
SPL7
--------->
ALFIN1
------->
PIF5
<-------
PIF5
------->
PIF4
--------->
TOE1(2)
------->
MYC3
<-----------
GT1
------->
MYC4
<-----------
HVH21
<-------
MYC3
------->
MYC2
<-------
PIF4
<-------
MYC4
------->
MYC2
------->
MYC4
<-------
MYC2
<-------
MYC2
<-------
MYC4
------->
MYC3
<---------
TGA1a
--------->
O2
--------->
TGA1a
<---------
TGA1a
<---------
ANAC55(2)
<---------
ANAC55(2)
<---------
O2
--------->
ANAC55(2)
<------------
OsbHLH66
<---------
O2
-
<-----------
HVH21
--------->
TGA1a
<
----------->
HVH21
===============================
------>
ZmHOX2a(2)
<---------
REM1(2)
----
<---------
At4g35610
<---------
ZAT2
------
<---------
TOE2(3)
--------->
ANAC55(2)
<---------
At4g35610
------
<---------
AHL20(2)
--------->
At4g35610
--------->
At4g35610
-----------
--------->
AHL20(2)
<---------
ARR11(3)
--------->
ZAT2
--------->
DAG2
<--
<---------
AHL20(2)
--------->
ARR11(3)
<-----------
RAV1(2)
<---------
TOE2(3)
<----------
DOF2
<---------
TOE1(3)
--------->
O2
----------------------->
TaNAC69(2)
------
==============================================
bZIP_DOF
<-------
TEIL
<-------
MYC3
<---------
TOE1(3)
tttttttctttgggattttaattttagggtttgatgatctgacacgtgcgacaatgagaggtccagctgtacacgtgttactggataaggttttgacacg
17312600
<---------
YAB1
--------->
ATHB51
<--------
HAHB4
<---------
ICU4
<---------
YAB1
<-----------
GT1
--------->
AHL20(1)
<---------
AHL20(1)
<---------
ARR11(3)
<--------
HAHB4
<------
MYB83
====================================
HOX2a_HOX2a
<------
MYB46(1)
--------->
DAG2
--------->
YAB1
-------->
At4g35610
---------->
DOF2
<---------
YAB1
---------
At4g35610
--------->
YAB1
<---------
AHL20(2)
======
MYC_MYB
<---------
ATHB12
--------->
AHL20(2)
----->
At5g28300
<<<<<<<<<
ARR2
<---------
AHL20(2)
<------
ZmHOX2a(2)
-------
--->
ANAC46
----------->
HVH21
<-----------
GT1
--------->
GLK1(1)
--------->
ATHB12
------->
TEIL
--->
ANAC58
<---------
ANAC58
--------->
YAB1
--------->
ARR14(2)
<---------
ICU4
<-------
TEIL
>
HVH21
<---------
AtMYB61
<---------
ICU4
<------
ZmHOX2a(1)
--------->
YAB1
<---------------
AtSPL8
------
P
<---------
MYB46(3)
--------->
AHL20(2)
--------->
ARR11(3)
<---------
YAB1
<---------
AHL20(2)
--->
ANAC58
<---------
ANAC58
<---------
AHL20(2)
<---------
ARR14(2)
--------->
ICU4
--------->
AHL20(2)
gtagctacagttggtgtgactcatctactcatttattacaatcaaaaaggatattcaatttattatcattattagcgatctaattaagtacatgaatatt
17312700
----------->
GT1
<---------
TOE2(3)
<---------
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(1)
<---------
AHL20(2)
--------->
ARR11(3)
--------->
AHL20(2)
<---------
ARR11(3)
<---------
YAB1
--------->
AHL20(2)
--------->
YAB1
<-----------
GT1
--------->
AHL20(2)
<-----------
HVH21
<-----------
GT1
<---------
AHL20(2)
<---------
AHL20(2)
------->
GAMYB
<---------
ATHB12
--------->
AHL20(2)
---------
---->
GT1
--------->
AHL20(2)
--------->
YAB1
<---------
YAB1
<----------
DOF2
<---------
AHL20(2)
<
aaaaacatttaaaatatattttgatgtaaattgataactgtcaaattgtcaatgataaaaccctttttacatttatatgatttttttttgtagataaaga
17312800
--------->
TOE2(3)
--------->
YAB1
----------->
GT1
--------->
ANAC58
<---------
YAB1
--------->
ANAC58
<---------
AHL20(2)
--------->
MYB52(1)
<---------
ARR11(3)
--------->
ANAC46
<---------
AHL20(1)
--------->
ANAC58
<---------
AHL20(2)
<---------------
AGL15
--------->
ARR11(3)
--------------->
AGL15
--------->
TOE2(3)
<---------
ZAT18
<---------
ANAC46
--------->
ANAC58
---------->
DOF2
<-----------
GT1
--------->
ZAT18
<---------
YAB1
<----------
DOF2
-------->
P
->
DOF2
<-------
GAMYB
--------->
AHL20(2)
<----------
DOF2
<---------
MYB52(2)
----------
DOF2
<-----------
GT1
--------->
AHL20(1)
----------------------->
TaNAC69(2)
gtcttttttcttaattttgtttcccgttgtagtgcataatatattatgttaattgtttgtaatctttttctttaacaagaaactaaccaagtcaaagcta
17312900
--------->
AHL20(2)
<---------
AtLEC2
<---------
AHL20(2)
<---------
ANAC58
----------->
GT1
<---------
ANAC58
<---------
TOE2(3)
-
<---------
TOE1(2)
<-----------
GT1
--------->
AHL20(2)
<---------
TOE1(3)
<---------
MYB46(3)
ttttctaggtttgcatgtttgtgtcattttactgaaaaaaaaaaaaaaaatagtagtaagttttttaacgtagaatattaaaatttgctacagttgttga
17313000
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AGI:
At4g36730.1
Description:
GBF1 (G-box binding factor 1); transcription factor. Identical to G-box-binding factor 1 (GBF1) [Arabidopsis Thaliana] (GB:P42774;GB:Q940I9;GB:Q944J1;GB:Q96263); similar to bZIP transcription factor family protein [Arabidopsis thaliana] (TAIR:AT2G35530.1); similar to G-box binding factor 1A [Brassica napus] (GB:CAA58774.1); contains InterPro domain G-box binding, MFMR; (InterPro:IPR012900); contains InterPro domain bZIP transcription factor, bZIP-1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827)
Range:
from: 17309616
to: 17312492
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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