Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   --DOF2 -------AGL15 <---------ANAC58               <-----------GT1        --------->YAB1     <------ZmHOX2a(1) ------>AGL15 <---------ANAC58      <---------ANAC46        ---------->DOF2    <---------YAB1   <---- -DAG2       <---------LBD16   <-----------RAV1(1)    ---------->DOF2       --------->ICU4      <----   gtggtcttcaacattttcgggtcgatgtctcaaatgttgtttgttttttactaaacaaaagaaaaagaaatcatagaacttattagtaaggactataact  16679900                --------->HSFB2a(2)                <---------HSFB2a(2)                                                                --              <---------REM1(1)                                                                   <--            <-------GAMYB                                                                         ---          <---------TOE2(3)                                                                       <--      <---------GLK1(2)                                                                           ---      <---------ARR11(3)                            --------->YAB1     <----------DOF2            <--      --------->ARR11(3)           --------->AHL20(2)  <---------GLK1(2)                          <-- ------DOF2<---------MYB46(3)      <---------AHL20(2)  --------->ARR11(3)                  ---------- -----DAG2<---------YAB1--------->MYB59 ----------->GT1<---------ARR11(3)        ------->TEIL     <--   ttttaaaagattttggttgtagaaattaggctgatatttattttgtaaaaactataagattttgaatttttgactttgacatgaatattagtagggtatt  16680000           --------->ANAC58           --------->ANAC58                                                        ----------->GT1 ------->TOE2(3)                                                           ---------->DOF2 -------ANAC46                                                          <---------TOE2(3) -------->GT1                                                          ---------->DOF2 -------ANAC55(1)                                                     <---------AHL20(2) ------>ANAC55(2)                                                 <---------------AGL15 -------ANAC58                                                    --------------->AGL15 -------ANAC55(2)--------->YAB1                                  ----------------->AGL3 ->GT1   <---------AtLEC2  ---------->DOF2        ------>ZmHOX2a(1)   --------->AHL20(2)         <--- -------ANAC58--------->CCA1(2)    ----------->RAV1(1)           ====================================   acgtaaaatttgcaagaaatgagaattcaaaaagagccaacaaaaccaagtcctgaaaatggacatgactaattaaagaaagaaaatgaaaaaacaaata  16680100                 <---------ICU4                 -------->ATHB1                 --------->ATHB51                 --------->ATHB12                                            --------------->AtSPL8                <---------AHL20(2)                                           <---------------AtSPL8                <---------YAB1                                              <---------ANAC46                <---------ATHB51                                        <---------ANAC58       <---------YAB1                                                   <---------ANAC58    <---------------AGL15                                               <---------ANAC46    ------>ZmHOX2a(1)                                                   --------->ANAC55(2)    --------------->AGL15 <----------DOF2                               <---------ANAC55(1)    ======================================MADS_MADS                     <---------ANAC55(2)   --------->TOE2(3)      --------------->AGL15                        --------->MYB52(2) --------GT1    --------->ICU4               ---------->ID1           <-----------GT1 ===================MADS_MADS      <---------WRKY12            <-----------GT1       <-------TEIL   aacttccttactatagaaattattgtttctttttaagtcaatggtttgtttttttttggtttttttttcatgttacttgtttgtacatccatattagtct  16680200                                                                                --------->ANAC58                                                                                --------->ANAC58             <---------YAB1                                                     --------->ANAC46           --------->YAB1                                               --------->YAB1          <---------YAB1                    <---------AHL20(2)         <---------ATHB12          --------->ICU4                  ----------->TBP       --------->At4g35610        --------->YAB1                  --------->YAB1          <---------At4g35610        <---------ICU4                  --------->AHL20(2)      --------->GLK1(1)       --------->ICU4                ------>MYB83--------->YAB1 <---------GLK1(1)       <---------YAB1                ------>MYB46(1) ---------->DOF2 --------->WOX13(1)       -------     --------->YAB1                <---------MYB59 <---------YAB1  ------------>CBF          <-------    <---------YAB1           --------->ZAT6--------->YAB1     <------ZmHOX2a(1) --------->ANAC55(2)  --------->YAB1           <-----------GT1<---------YAB1    --------->ALFIN1 <-------TEIL    --------   tctattatcatcatgataatacaaagttttgactctaccaaattataaaaatcataaaagacgaggagctccaatcacgttcaagtaatagtatagatat  16680300          <---------ICU4         <---------AHL20(2)         --------->ICU4     <---------AHL20(2)            <----------DOF2         <---------ATHB51   --------->AHL20(2)      ---------->DOF2         --------->AHL20(2) *TSS                 --------->TOE2(3)    ----------->GT1        --------->AHL20(2)    <----------DOF2   ----------->GT1         --------->YAB1      ------>MYB83 ---------->DOF2           <---------AHL20(2)  ------>MYB46(1)                <---------GLK1(1) -->CCA1(2)    ---------->DOF2               <---------MYB59             ---------->DOF2            < --ARR11(3)  --------->AHL20(2)            <---------ARR11(3)       ---------->DOF2                <- ->ARR11(3)  <---------AHL20(2)            --------->ARR11(3)  <---------------AGL15             ----   atggaaaggaaataattaaaagaccctaattaaaatttagttcaagacctactttaaagccttttacaaaaaaagaaaagaattctctaagtcgaaatcg  16680400                               <------NtERF2                              ------>NtERF2                             <---------ALFIN1                 --------->YAB1                            --------->MYB46(3)              <----------DOF2           <-------TEIL    ------>NtERF2               --------->ZAT18               <---------DAG2       <---------TOE1(2)  ------>NtERF2             <---------ANAC58                 <----------DOF2   <---------------AtSPL3 --------->LBD16           <---------ANAC58              <-----------GT1 --------->YAB1           --------->ANAC46        --------->ZAT14        ------->GAMYB             <- ---------YAB1          <---------LBD16           <---------ZAT14       --------->MYB46(3)   <------- --------DOF5.7(2)    <-----------GT1        <---------At4g35610<---------YAB1    ---------->ID1 ---- ----->DOF5.7(2)  <----------DOF2        ------>NtERF2 <---------ZAT18  <---------MYB52(2)   --------   ttatcgtagtacgttcatgtcttttctccggccaccgaaacgatgccatctgtttagtgcgcctttataattcaacgaccctttgtacttttccgattcc  16680500                                                                  <----------DOF2                                                         <---------TOE1(3)                                                         <---------TOE2(3)                                                     <----------DOF2 ---------DOF2                --------->ZAT14       ------>ZmHOX2a(2)                  <---------LBD16 --ARR14(2)                   <---------ZAT14       =============================HOX2a_HOX2a<-------- -->ZmHOX2a(1) <---------CCA1(2)                  --------->ARR11(3)      ------>ZmHOX2a(1) --------- ->ARR14(2)    <---------At4g35610                <---------ARR11(3)  <-----------GT1--------->GLK1(2)   tctttctctataacttcatctctcccattctcttcactcttctcaaaaattcgatctttagggtttttcttttatcctcttatcgctaatctggagctct  16680600          <---------TOE2(3)                 --------->ARR14(2)        ---------->DOF2     ------>ZmHOX2a(1)           ----------->GT1 -At4g35610                --------->TOE2(3)<---------GLK1(2) >At4g35610             <-----------GT1     <---------ARR14(2)           <-----------GT1   atagagactataaaggtatgtttttttttcctcaattacaggctcggatgctcaaattttgtaaaaaatgactattttctattgctgaattgctcgaatt  16680700                              --------->At4g35610                                        <------MYB83                              <---------At4g35610                                        <------MYB46(1)                         <---------LBD16                                             --------->ATHB12                     --------->ATHB12                                            <------ZmHOX2a(1)                   <---------WOX13(1)    <-----------GT1<---------ARR14(2)   ---------->DOF2  -------                 --------->ATHB12     --------->CCA1(2) --------->ARR14(2)--------->HSFB2a(2) <------                <---------YAB1<---------ZAT2        <---------At4g35610   <---------HSFB2a(2)<-------         <---------TOE2(3)    --------->ZAT2        --------->At4g35610------->TEIL ------>ZmHOX2a(2)         <---------TOE1(3)<---------HSFB2a(2)  <----------DOF2        <---------CCA1(2) <---------MYB46(3)   gttgtgaatttagggtttttgattgattcgggagctcgagatttgacttcttttagctgattcggcaagtttgtatctagaaaggatcgattggtgaggt  16680800  Previous    Next  AGI:  At4g35040.1    Description:  bZIP transcription factor family protein. similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G16770.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73631.1); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700) Range:  from: 16680328    to: 16682098    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version