Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------YAB1                                                    --------->YAB1                      <---------AHL20(2)         --------->YAB1                                ------                      --------->ATHB12           <---------ICU4                               <------                      --------->ATHB51           -------->HAHB4                            <---------ARR14(2)                      --------->AHL20(2)        --------->ICU4                             --------->ARR14(2)         <-----------GT1        ------->TEIL    <---------ATHB51                  <---------AHL20(2)  --------->TOE2(3)  <---------AHL20(2)      <---------AHL20(2)                  --------->AHL20(1) ------AHL20(2) --------->AHL20(2)           --------->AHL20(2)    --------->YAB1<---------AHL20(2) ----->AHL20(2) <---------AHL20(2)  <-----------GT1<---------YAB1 <-------TEIL   --------->AHL20(2)   taaatctaaattttctatttaaaattatttgatgaatttttctatttttaattatgataaatgcaagattcatagtatctaaatttaatacagtatatga  16521500                                                         --------->AHL20(2)                                                         <---------AHL20(2)                                                        --------->AHL20(2)                        --------->AHL20(1)        ----------->GT1                        <---------ARR11(3)    <---------ICU4                        --------->ARR11(3)    --------->ATHB12                        <---------AHL20(1)    -------->HAHB4             <-------TEIL                   <---------AHL20(2)         --------->YAB1        --------->AHL20(2)          --------->AHL20(2)                 <---------YAB1       ------>MYB83      <---------YAB1   <---------AHL20(2)  <---------ICU4--------->AHL20(1)              <---------ICU4   <----------DOF2 --------->AHL20(2)     --------->ICU4<---------AHL20(2)    <---------AHL20(2) --->ATHB12 <-----------GT1      <-----------GT1<---------YAB1    ------>MYB46(1)<---------YAB1    -- ---YAB1--------->TOE2(3)  <---------AHL20(2)--------->ICU4  <-----------GT1  --------->AHL20(2) ----   ttaggcttttcattaaacaatataaatattttttttatcttgacataatgatgagtaaataatttaccaactaaatacatataatttttgatcaatacca  16521600                                                                                               <-----                                                                                            <--------                                                                                            <--------                                                                                         <---------YAB1                                        <---------AHL20(2)                      <---------AHL20(2)                                       <---------AHL20(2)                       <---------AHL20(1)                                       --------->AHL20(2)           --------->AHL20(2) <----------DOF2                              <---------YAB1                        <---------AHL20(2)<---------ANAC58      ----------->GT1     <---------ANAC58                          --------->AHL20(1)<---------ANAC58 ---------->DOF2          <---------ANAC58                         --------->AHL20(2) <---------ANAC46 ------->YAB1             --------->ANAC55(2)               <---------TOE2(3)   --------->ARR11(3) ----->AtLEC2    <----------DOF2<----------DOF2       <---------AHL20(2)        --------->AHL20(1) <-   ttcaaaagaagaaaaaacactttctcttacttatctttgaattaattttgaaatatttcattaagaaaaattaattgtttaaaatattgctttgattaat  16521700                                                                                             --------                                                                                     <---------HSFC1(2)                                                                                     --------->HSFC1(2)                                                                                     <---------HSFB2a(1)                                                                                    <-----------ARR10                                                                                    --------->GLK1(2)                                                                                    --------->ARR11(3)       --------->HSFB2a(2)                                                          --------->ARR14(2)    --------->ANAC58         <----------ID1                  --------->AHL20(2)     <---------ARR14(2)    --------->ANAC58         ----------->GT1             <------ZmHOX2a(1)          <---------ARR11(3) ----TOE2(3)          <---------TOE1(3)                 ----------->GT1        ---------->DOF2 -YAB1 <---------HSFB2a(2)  ----------->GT1       --------->DAG2          ---------->DOF2    <------- -WOX13(1)            <---------TOE2(3)          ---------->DOF2 ----------->GT1   <---------GLK1(2) --------ETT(2)     ---------->DOF2     <-----------GT1--------->MYB59 --------->YAB1--------->HSFB2a(1)   gtagacactctagaaaactttttaaaggttagggaaaaaatgttaccaaaaaaaagttaggaaaaaaatgtaaaaataaagaaaagaatcttcttcccct  16521800                                                                                         ------>ZmHOX2a(1)                                                                                        --------->ANAC46                                                      <---------DAG2           <---------ARR11(3)                                                      <----------DOF2          --------->ARR11(3)                                              --------->YAB1                 <---------AHL20(2)   --------->GLK1(2) <---------ANAC58       --------->ANAC58             <---------HSFB2a(2) ------->AGL15       <---------ANAC58       --------->ANAC58             --------->HSFB2a(2) <------- --------AGL15   ------->TEIL               --------->ANAC46 <---------YAB1 --------->AHL20(2)      -   aatagaatccaaacaaatgtatcgcttaccatcaagttgcacaaacactcaaaacgctttttgatgatttttcttctataaaatctttctcctcaaccat  16521900                                                         --------->AHL20(2)                                                       <----------DOF2                                                --------->GLK1(1)                                <-----------GT1 <---------GLK1(1)              --------->GLK1(1)                            <----------DOF2    <---------ARR14(2)           <---------YAB1                            <---------DAG2     --------->ARR11(3)         <---------At4g35610        <---------ALFIN1   <---------DAG2--------->HSFB2a(2)           <<<<<<<<<TBF1 --ATHB12   <------------------------ANAC81    <---------ARR11(3)   <<<<<<<<<TBF1           <-------TEIL --------->DOF2    ------>ZmHOX2a(1)     <---------HSFB2a(2)   <------------------------ANAC81   ttcaaagccccctcttctctccttctctcccttttctctctctctcgaagatatcgcctttaattccttcttcttcttctgatttcttcaaagattcatt  16522000                --------->HSFB2a(2)                <---------HSFB2a(2)            <---------GLK1(2)           <---------At4g35610    -------->P           --------->At4g35610  <---------MYB111(1)           <---------ZAT2      --------->At4g35610       ------>ZmHOX2a(2)       --------->STY1(2)                                --------->ARR11(3)      <---------GLK1(1)        <---------STY1(2)                                --------->ARR14(2) <-      <------ZmHOX2a(2)        <---------At4g35610                              <---------ARR14(2) --     --------->ARR11(3)       --------->ANAC58                              --------->At4g35610   <--     <---------ARR11(3)       --------->ANAC58     ----------->GT1          <---------At4g35610   ---    <---------GLK1(1)    --------->ZAT18   ---------->DOF2                --------->YAB1<---------MYB46(3)   tcttagagatctcagcttctgtaagagtaggctagctaccaaaaaaaaagaaatagaaaaaaacattgatgcttaatcagcagttcttggtgtttgagac  16522100                       --------->ARR11(3)         <---------ATHB51         <---------ATHB12 <----------DOF2                           --------->PCF2  ---------->ARF1      <---------ARR11(3)                          <------ZmHOX2a(1) ------MYC3            --------->AGP1         <---------AHL20(2)--------->ATERF1(1)          <------- ----->MYC3          ----------->ARR10      <<<<<<<<<MYB98      <------NtERF2               <-------GAMYB -------O2--------->YAB1 ------>ZmHOX2a(2)<---------YAB1 <---------ATHB12                  <--------- ------>O2<--------ATHB1<------ZmHOX2a(2)<---------TOE2(3)<-----------RAV1(2)      <---------ATHB12   acatgtctccaataatactcagtgagatctttctctctgggtttatgttaaattccacaatcaggcgcaggacccatcttgttcaatctttctctgttgt  16522200                                                                 --------->ATHB51                                                                 <---------ICU4                                                                 <--------HAHB4                                                                --------->ICU4                                                              --------->YAB1                                                            --------->ANAC46          <---------ANAC58   ------>ZmHOX2a(2)              --------->ANAC58  <----------DOF2           <---------GLK1(1)               --------->ANAC58 --------->TOE2(3)     --------->YAB1                --------->ARR11(3)        --------->TOE2(3) --MYB52(1)<----------DOF2 --------->ARR11(3)        <-----------GT1--------->YAB1 --RAV1(1)<---------ANAC58 <---------ARR11(3)       <---------CCA1(2) <----------ID1    <----------DOF2   cttcctttactggctttactatgtctcatgatctctgaacttatctccagttttatatctatacgcataattacaacaaaaccctagtttcttttcaaat  16522300                                                                                                 <---                                                                                                <XXXX                                                                                                <----                   --------->At4g35610        <---------ANAC58                                 <-----                   ----------->RAV1(2)        <---------ANAC46                              <--------                   <---------At4g35610     <---------ANAC46                                 ---------                   ===============================RAV                                       ---------               <-----------HVH21        <---------MYB52(1)                                --------->AHL20(1)               <-----------TGA1        <-------GAMYB                                      <---------AHL20(2)             ---------->ID1      ------>ZmHOX2a(1)                                     --------->AHL20(2)            <-----------GT1 ------>ZmHOX2a(1) <---------ANAC58             ---------->DOF2<---------AHL20(1)      ---------->ID1    <---------PCF2<-----------RAV1(1)       <---------AHL20(2)   --------->AHL20(2)   ttctcttcttcgtttttcgtcatctgggtcctgtcctgttctgttgtgtcttgttctgttctgtttttaattcccctaaaaacccattttaaaatatttt  16522400  Previous    Next  AGI:  At4g34588.1    Description:  CPuORF2 (Conserved peptide upstream open reading frame 2). similar to CPuORF5 (Conserved peptide upstream open reading frame 5) [Arabidopsis thaliana] (TAIR:AT1G75388.1) Range:  from: 16521866    to: 16523235    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g34590.1    Description:  GBF6 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 11); DNA binding / protein heterodimerization/ transcription factor. similar to ATBZIP44 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 44), DNA binding / protein heterodimerization/ transcription factor [Arabidopsis thaliana] (TAIR:AT1G75390.1); similar to unknown [Populus trichocarpa] (GB:ABK94250.1); contains InterPro domain bZIP transcription factor, bZIP-1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) Range:  from: 16521866    to: 16523235    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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