Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <---------At4g35610                         ----------->RAV1(2)                    ------>ZmHOX2a(2)                  <-----------ARR10                  --------->ARR14(2)                                               --------->GLK1(1)                  <---------ARR14(2)                                               --------->CCA1(2)                 <------ZmHOX2a(1)                                                --------->ARR14(2)               <---------TOE2(3)                                               <---------ANAC46           ================HOX2a_HOX2a                   --------->ICU4      --------->MYB52(1)    --------->AHL20(1)   --------->At4g35610           ----------->GT1      ----------->HVH21     <--    <---------AHL20(1)  ------>NtERF2                <---------ZAT14  <------ZmHOX2a(1)     ---------    --------->AHL20(2) <---------ALFIN1              --------->ZAT14  =============================== -----HVH21--------->At4g35610                 ------->TEIL         <---------TOE2(3)      ---------- -----TGA1 ----------->RAV1(2)              <---------YAB1      <---------At4g35610<---------GLK1(1) ->YAB1    ------>ZmHOX2a(1)  ------->TEIL--------->CCA1(2)    <---------TOE2(3)  <---------ARR14(2)   agaaaatataatcctctgaggatcgacacctgaatctaatcgcgatatgaatcagagaagtgattaagctaaggagaaatgacggatatgagaaaaagcg  13410700                                                                                              -------                                                                                              -------                                                                                              <------                                                                                         --------->WOX13(1)                                                                                        ------>ZmHOX2a(2)                                                                                      --------->ARR11(3)   <---------ATHB12                                                                   <---------ARR11(3) ----ZmHOX2a(2)              --------->ARR14(2)                                       <---------AGP1 >DAG2                       <---------ARR14(2)                <---------AHL20(2)     ------->TEIL ====HOX2a_HOX2a       <---------SPL7  <-------TEIL ------->TEIL              --------->At4g35610 >DOF2               <---------ATHB12 --------->CCA1(2) ----------->GT1       <---------At4g35610  <-   atccaatgagttttagattccaaatcgttcggattcagagatacaacaacgatgaatctcgttatataaacttggtaatcagctcatggatctatcagct  13410800                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                               ------                                                                           --------->ANAC58    ------                                                                           --------->ANAC46    ------                                                                        --------->TOE1(2)      ------                                                                  <---------KAN4(2)            <-----                                                               --------->LBD16                 ------                                                              --------->LBD16                 -------                                                              <---------HSFB2a(2)             -------                           --------->TOE2(3)                  --------->HSFB2a(2)             -------                  <---------GLK1(2)                           --------->ANAC46            --------->DEAR3(2) -->ZAT2      <---------ANAC58                               <---------HSFB2a(2)       <------ZmHOX2a(1) -->At4g35610 <---------ANAC58                               <---------LBD16       <---------TOE1(1) ---At4g35610 <---------ANAC46             ---------->ARF1   --------->HSFB2a(2)   <---------ANAC46 - --------ANAC46<---------WOX13(1)    <-----------GT1        <---------LBD16--------->ANAC58----------   tgcgaagaaattagttgcttgattctcaatctcaaattttaacttgtttcccatcgcgattttcccggaataaacacacgagattacgaggaagcgaccg  13410900                                                                                      <-------GAMYB                                                                                     --------->MYB55(2)                                                                                     <---------MYB46(3)                                                                                   <---------MYB52(1)                                                                                  ------>NtERF2                                                                                  --------->LBD16                                                                                 <---------DEAR3(1)                                                                                <---------LBD16                                                                                --------->ATERF1(1)                                                                                <------NtERF2                                                                               ------>NtERF2                                                                               <---------ATERF1(1)                                                                              --------->ARR14(2)                                                                              <---------ARR14(2)                                                                             <---------ABI4(2)                                                                             --------->At4g35610                                                                             <---------At4g35610                                                                             --------->ATERF1(1)                                                                             <------NtERF2                                                                             <---------ZAT2                                                                             --------->RAP2.3(1)                                                                            <---------RRTF1(1)                                                                            <---------ERF1                                                                            <---------DEAR4(2)                                                                            <---------RAP2.3(1)                                                                            <---------ATERF1(1)                                                                            <---------ORA47(2)                                                                            <---------DEAR3(2)                                                                            <---------RAP2.6(1)                                                      <---------At4g35610   ------>NtERF2                                                      <------NtERF2         <---------MYB46(3)                                                      <-------GAMYB         --------->ABI4(2)                                                     <---------MYB46(3)    <---------RAP2.3(3)                                                    <---------ANAC46       <---------RAP2.3(2)                                                 <---------TGA1a           <---------RAP2.6(2)                                                 =============MYC_MYB      <---------DEAR3(1)                                                 <---------DEAR3(1)        --------->DEAR3(1)                                                 =============MYC_MYB     ------>NtERF2                                                 --------->TGA1a          <---------At4g35610       ----------->GT1                           <---------O2             <------NtERF2 -->MYB83                                        --------->ANAC46        <---------ATERF1(1) -->MYB46(1)                                     --------->O2            <---------ERF1 ---->MYB55(1)                                  ------>NtERF2            <---------RRTF1(1) ----->HVH21                                --------->ANAC58             <---------RAP2.3(1)        < --->DREB2C(2)                              --------->ANAC58            <---------RAP2.3(3)         - --->MYB46(3)                               --------->bZIP60(1)         <---------RRTF1(2)       <--- --->DEAR3(1)        ---------->DOF2        --------->ANAC46            <---------ANAC46         <--- ----MYB55(2)        ======================================bZIP_DOF     <---------RRTF1(3)       <--- ->GAMYB         <----------ID1          <---------SPL7                 <---------DEAR3(1)     ------ -->MYB46(3)    ------------------------>ANAC81<---------ALFIN1         <---------RAP2.6(2)   ------- -->SPL7      --------->DAG2       ---------->DOF2 <---------LBD16      <---------RAP2.3(2)   ------- -->DEAR3(2) ==============================================bZIP_DOF <---------ANAC58 <---------DEAR3(2) -------->LBD16--------->DAG2      ========================bZIP_DOF <---------ANAC58<---------DEAR3(1) ->HVH21     ---------->DOF2  >>>>>>>>>TBF1--------->SPL7     ------->TEIL--------->ATERF1(1) -------   accgcgaaatcgtagaaaagggagaaagagaagaagaaaaagccttacgccacggcggatgatgagccttccttgcggcggctccggcggttgaaggtga  13411000         --------->ALFIN1       <---------ANAC46      <---------ANAC46      <---------ANAC58      <---------DEAR3(1)      <---------ANAC58   <--------P  <---------ANAC58  <-------GAMYB  <---------ANAC58                                                                      <------------CBF --------->ABI4(2)                                                                    <---------AHL20(2) <---------MYB46(3)                                                                   <---------ARR11(3) --------->MYB52(2)                                                                   --------->AHL20(2) --------->MYB55(2)                                                                   --------->ARR11(3) ---------AtMYB61                                                     <---------HSFB2a(2) -------->ALFIN1                                                      <---------------AGL15 ------DEAR3(1)                                               --------->ANAC58        --------->AHL20(1) ------DREB2C(2)              <---------YAB1                  --------->ANAC58        <---------AHL20(1) ------ANAC46              <---------ARR11(3)              <---------REM1(2)--------->YAB1 --->MYB52(1)              --------->ARR11(3)            --------->ETT(2)   *TSS    ------->TEIL ---->HVH21             --------->DAG2                   <---------ETT(2)  --------->At4g35610 ---->TGA1             ---------->DOF2               --------->DAG2   --------->HSFB2a(2)           - -->ALFIN1        ----------->GT1     <--------P   ---------->DOF2    --------------->AGL15         <   cggtggttgcggtggaaaacgcgaaaaaagctcttattgggtaagtgagagaaaaaaggtcgacacgattttctataagcagaatgaatatattgcaaaa  13411100                                          <---------ANAC58                                          <---------ANAC58                                     <-------GAMYB                                    <---------MYB46(3)                                    <-----------RAV1(1)                   <---------AHL20(2)                            <---------YAB1<---------ANAC46                --------->AHL20(2)                          --------->AHL20(2)                   --------->AHL20(2)                          <---------AHL20(2)         <---------DAG2    --------->AHL20(2)                         <---------AHL20(2)          <----------DOF2  <---------AHL20(2)                         <---------AHL20(1)       <-----------GT1     --------->AHL20(2)                         --------->AHL20(2)   <-----------TBP  <---------AHL20(2)                       ------>MYB46(1)   <------NtERF2        --------->AHL20(2)          <----------               ---------->DOF2      --------->MYB52(2)    <---------AHL20(2)          <---------YAB1 -------->AHL20(2)     ------>MYB83 --------->MYB55(2)   --------->AHL20(2)         <---------AHL20(2) ---------AHL20(2)   <---------MYB59--------->MYB111(2)  <---------AHL20(2)--------->AHL20(2)   ttttaaatatgctaagaaaaagaccaaattatttttgtttgttggcgtttttatactttttaaatttaaaaaataaataattttgtttatttttactcga  13411200                                                <------NtERF2                                              <---------DEAR3(1)                                           --------->ANAC46                                           --------->ANAC58                                           --------->TGA1a                                           <---------O2                                           --------->O2                                           --------->bZIP60(2)                                           <---------TGA1a                                         <---------ALFIN1                                     <-----------HVH21          <-------MYC2               --------->AHL20(2)   =================bZIP_DOF   <-------MYC3               <---------AHL20(2)   <----------DOF2             ------->MYC3             --------->ANAC46 -GT1    ----------->GT1   <-----------GT1 --------->ANAC58     ------->MYC2  --------->At4g35610   tgttgatacagttgtaataaaactccttgttacattcactttcacacgtcgtcgtctagtggagcatgtgtccatttatgcgctgtcttaaacaccatcg  13411300                                                        <---------AtMYB61                                                      <----------DOF2                                                     <---------ANAC46                                                     <---------ANAC58                          <-----------HVH21       <---------MYB52(1)                       <---------ANAC58          <-------GAMYB                       <---------ANAC58         <---------MYB46(3)                       <---------ANAC46         <-----------RAV1(1)                 --------->ANAC46           <---------YAB1                 ----------->HVH21       --------->GLK1(2)             ------>ZmHOX2a(1)          <---------ARR14(2)         <------MYB83                    <-    <---------ICU4    <------NtERF2     <---------GLK1(2)          <------MYB46(1)         <---------AHL20(2)    --------->YAB1   ------>NtERF2  <---------LBD16  <---------ANAC58   <---------LBD16   --------->AHL20(2)   <---------ATHB12 <---------DEAR3(1)  --------->ARR14(2)        --------->MYB59     ----------->GT1   tttcaataatcgttcctatacgacggcgtgtcatgttattcggattctgactgttgctttggtctgatttggtctctgggtttgaattcggtttaaattg  13411400                                                   ------>MYB83     <---------AHL20(2)            <---------YAB1                         ------>MYB46(1) <---------YAB1           --------->AHL20(1)                     ----------->RAV1(1)           --------->AHL20(2)                    ------->GAMYB  <---------YAB1         <---------AHL20(1)                     --------->MYB46(3) <---------WOX13(1)         --------->AHL20(1)                --------->TOE2(3)  <----------DOF2                  <-----  ----------->GT1                        <-------TEIL   --------->AHL20(2)        <----------ID1----- ---------DOF2                       --------->MYB52(2) --------->YAB1  --------->YAB1   --------->ZAT6   tctttggaaaaaatattatagcaaaaaccagtataagcttagttacattaaccaacaattaaaactttgattaatggtaagagagggacaaactctactg  13411500                                      ----------->GT1                       --------->ANAC58                                     <---------TOE2(3)                      --------->ANAC58                                     --------->MYB59                    --------->ANAC46                                     <---------TOE1(3)                 <---------ZAT18    ----------->RAV1(1)     <----------DOF2                  <---------At4g35610    --------->MYB52(1)   <-----------GT1                     --------->At4g35610            --------- ----ZAT6 <---------WOX13(1)<---------DAG2            <---------ANAC46 --------->ZAT18     --------->ICU4 ------>GT1             <-----------GT1        <---------At5g28300<----------DOF2   ---------->DOF2   gtaaaacaacagattgatcatgttttttaactttttttttaggtaaaattacagttactggtgagctactttgtacacaagaaaaaaaaaggaatgataa  13411600  Previous    Next  AGI:  At4g26570.1    Description:  ATCBL3 (CALCINEURIN B-LIKE 3). Identical to Calcineurin B-like protein 3 (CBL3) [Arabidopsis Thaliana] (GB:Q8LEM7;GB:O81447); similar to CBL2 (calcineurin B-like protein 2), calcium ion binding [Arabidopsis thaliana] (TAIR:AT5G55990.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72862.1); contains InterPro domain Calcineurin B protein (InterPro:IPR015757); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Recoverin; (InterPro:IPR001125); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 13408428    to: 13411076    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g26580.1    Description:  protein binding / zinc ion binding. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G55970.1); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G55970.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN74282.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 13411450    to: 13413035    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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