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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                              ------
                                                                                             <------ZmHOX2a(2)
                     <---------GLK1(1)                                            --------->REM1(2)
                     --------->GLK1(1)                                            --------->ZAT14
                    <---------ARR11(3)                                           <---------MYB52(1)
                    --------->ARR11(3)                                          --------->LBD16
                    <---------ARR14(2)                                         <---------ANAC46
       <---------ANAC58                                                       <---------------------
       <---------ANAC58                 --------->LBD16                    <---------ZAT2    <------
       <---------ANAC46          <---------GLK1(1)                         --------->ZAT2    -------
     --------->GLK1(2)           --------->GLK1(1)     --------->ANAC46   --------->ANAC58  <-------
-----GLK1(2)        --------->ARR14(2)<---------LBD16  <---------ETT(1)   --------->ANAC58  --------
 
gtcttgagtttcttgagcctgaagatttccacagggatatcaccggagagagaattatccgacaaatcgagtaactcaagctccgtgaagtctccgatct  13397700
                                                                                     <---------HSFB2a(1)
                                                                                     <---------HSFC1(2)
                                                                                     --------->HSFB2a(1)
                                                                           --------->DEAR3(1)
                                                                           <---------ATERF1(2)
                                                                          --------->At4g35610
                                                                          <---------LBD16
                                                                        <---------WRKY38(1)
                                                                      <-----------HVH21 --------->AtLEC2
>ZmHOX2a(2)                                                   --------->LBD16        --------->HSFC1(2)
--TaNAC69(2)        <-------TEIL--------->DAG2               <---------ANAC46       --------->GLK1(2)
---GLK1(1)         --------->GLK1(2)                        <---------LBD16--------->ATERF1(2)
-->GLK1(1)      ----------->ARR10  --------->ALFIN1         <------NtERF2--------->MYB52(1)
--ARR14(2)  --------->LBD16    ---------->DOF2            <---------ARR14(2)    <------NtERF2     <-
->ARR14(2)<---------LBD16    --------->ARR11(3)           --------->ARR14(2)----------->RAV1(1)<----
 
ccttggggattactccggtgagattcagtgaagataaagtgagggaagtaagagacttgaggctccggagactagtcaccggcagagaaccttgcaagtc  13397800
                                                                                    <-----------RAV1(2)
                                                                                 ----------->HVH21
                                                                                <-------PIF5
                                                                                ------->PIF5
                                                                               <---------ANAC58
                                                                               <---------TGA1a
                                                                               =====================
                                                                               =====================
                                                                               <---------bZIP60(2)
                                                                               --------->O2
                                                                               --------->TGA1a
                                                                               <---------ANAC58
                                                                               <---------ANAC46
                                                                               <---------O2
                                                                              <------NtERF2
                                                                              <---------------------
                                                                             ------>NtERF2
                                                                            --------->DEAR3(1)
                                                                            <---------DEAR3(1)
                                                                           --------->ATERF1(1)
                                                                           --------->RAP2.3(1)
                                                                           <------NtERF2
                                                                          <---------RAP2.3(1)
                                                                          <---------ERF1
                                                                          <---------ATERF1(1)
                                                                         <---------DEAR4(1)
                                                                         <---------ANAC46
                     --------->HSFC1(2)           <---------ATERF1(1)    --------->ETT(1)
                    --------->ARR14(2)            --------->ORA47(1)     <---------DEAR3(1)
             <---------GLK1(1)                   --------->DEAR3(1)      <---------RAP2.3(3)
            --------->ARR14(2)                   --------->DEAR4(1)      <---------At1g77200
            ------->TEIL                      --------->ANAC46           <---------DREB2C(2)
            <---------ARR14(2)              <-----------GT1            <-----------HVH21          <-
           <---------CCA1(2)       --------->At5g28300      <---------AtLEC2----------->HVH21 ------
       --------->At4g35610         <-------GAMYB--------->ORA47(2)    ==========================RAV-
  <----------DOF2 --------->LBD16 ----------->GT1<---------ETT(1)     <-----------RAV1(1)    -------
--------CCA1(2)  --------->ANAC46<---------TOE2(3)------>NtERF2       ----------->HVH21   <------ZmHOX2a(1)
---TEIL<---------At4g35610     ------------>AtMYB77  <---------MYB59  --------->ALFIN1 <------ZmHOX2a(1)
 
catacctttgagctgtatctccgaaacttcacctctacggttacattttacgccgacccaattgcagggagatgtgtcggcgacgtgccaggaggaaaaa  13397900
     <------NtERF2
    --------->LBD16
   --------->DEAR3(1)
  --------->ATERF1(1)
  <------NtERF2
  <---------LBD16
 <---------ATERF1(1)
 ------>NtERF2                                        --------->ETT(2)
<---------DEAR3(1)                                 <------MYB46(1)
--------->DEAR3(1)                                 <------MYB83
====bZIP_DOF   --------->At4g35610                 <---------MYB46(3)
=======================MYC_MYB                    <---------AtMYB61
--TaNAC69(2)   <---------At4g35610        <---------WRKY18(1)
----------HVH21<-------GAMYB           <---------ANAC58
--->DAG2--------->ARR11(3)             <---------ANAC58                      >>>>>>>>>TBF1
-------->ATERF1(1)                   --------->ARR11(3)                      <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
--->DOF2<---------ARR11(3)  ----------->HVH21    <--------P      <-----------RAV1(2)
 
gcgtcgccggagatgttcagttgagacttccatgacaagagagcttgaccttgttggtcgagagagaaacaggggatgaagaagaaacagagtagggatg  13398000
                             --------->At4g35610
                             <------NtERF2
                             <---------At4g35610
                      <------MYB83                                                             -----
                      <------MYB46(1)                                             --------->DAG2*TSS
                 <---------RVE1(1)                                    <-------GAMYB            -----
                 <---------CCA1(1)                                   <---------ANAC58         ------
                --------->ARR11(3)                                   <---------ANAC58       --------
                <---------ARR11(3)                             <---------ZAT14----------->GT1-------
        --------->GLK1(2) <------NtERF2              >>>>>>>>>TBF1  --------->ZAT18  <----------ID1
    <------ZmHOX2a(1)--------->MYB111(1)         <------ZmHOX2a(1)  <-------TEIL ---------->DOF2<---
 
agaagaaggagagtctatagatatttggtggcatcggagaagacgaagatgaggaagaagaatgagagaagtgcgttgggattgtaaagcgaagaaccaa  13398100
                                       --------->AHL20(2)
                                   --------->AHL20(2)
                                   ----------->TBP
->MYB46(1)                         <---------AHL20(2)                    <---------HSFB2a(1)
->MYB83<---------AtMYB61         ----------->TBP                         --------->HSFB2a(1)
--->WOX13(1)                    <---------AHL20(1)                       <------MYB46(1)
->MYB46(3)                      --------->AHL20(1)          <---------REM1(1)            ---------->DOF2
-->AtMYB61                     --------->AHL20(2)<---------ZAT14         <------MYB83 ----------->RAV1(1)
------ATHB12               <------ZmHOX2a(1)     --------->ZAT14  ---------->DOF2  ------>ZmHOX2a(2)
 
tccatcggttttggttttattttgtttataggaaatatataaataaacacagagcagagagagaagtagcaaaggaaggtttttgatcccaacaaagttt  13398200
                                                                                 <---------AHL20(2)
                                <----------DOF2                              --------->ICU4
                     <---------AHL20(2)                                      ------>ZmHOX2a(1)
                   <---------YAB1  <---------YAB1                           <---------MYB59      ---
                  <---------AHL20(2)                             --------------->AGL15           <--
         <----------DOF2  <---------ICU4                         <---------------AGL15           ---
     -------->P <---------YAB1 <---------ANAC58                  --------->TOE1(3)               <--
  <---------MYB52(2) --------->AHL20(2)   ----------->GT1       ----------------->AGL2   ---------->DOF2
--------->ZAT6<---------ZAT6   <---------ANAC58   ----------->GT1--------->TOE2(3) ----------->GT1
 
ctatcactaaccctttagtattattttaatctttgcttttgatttttgtaaaattgaaaaaacaattaccctaaatagtcctaattaagttacaaagtag  13398300
                                                                                      <---------MYB59
                                                                                      --------->TOE2(3)
                                                                                      <-------------
                                                                                   <-----------GT1
                                                                                  --------->KAN4(2)
                                                         <---------AHL20(1)      --------->KAN4(1)
                                                         --------->AHL20(1)      <---------KAN4(1)
                                                         --------->AHL20(2)      <----------TaMYB80
           --------->At4g35610 <---------TOE1(3)         <---------AHL20(2)     <---------KAN4(2)
------>ZAT18                   <---------TOE2(3)        <---------AHL20(2)      ---------->TaMYB80
-------ZAT18                  <---------DOF5.7(2) ------>ZmHOX2a(1)         --------->ANAC46
------>ZAT14                  --------->MYB52(1)  ----------->GT1           --------->ANAC58      <-
-------ZAT14     <------ZmHOX2a(2)        --------->YAB1--------->AHL20(2)  --------->ANAC58   >>>>>
 
ttcactcttgaaatagctggatcaagttttagataacgttttgaaacataatcctgtaattaaatttggatttgacttcaaggaatataccttacataga  13398400
               <---------AHL20(2)           --------->AtMYB61
               --------->ATHB12          --------->AtMYB61
           <---------AHL20(2)           <---------MYB55(2)
           --------->AHL20(2)           --------->MYB46(3)
      <---------AHL20(2)              --------->ORA47(1)
  <----------DOF2                     ------>NtERF2
 --------->TOE2(3)         --------->AHL20(1)                               --------->AHL20(1)
--AGL15<---------AHL20(2)<-----------------------TaNAC69(2)         --------->YAB1 ----------->RAV1(1)
----------GT1 <---------AHL20(2)      <---------ATERF1(1)      --------->AHL20(2) <----------ID1
>>>>GATA-1<---------AHL20(2)         --------->DEAR3(1)---------->DOF2 --------->AHL20(2)--------->YAB1
 
taaaccttttttatttatttattggaaaaacatattatggccgaccaccaaaatttttgaaagtaagaaaataatcaaatattatgcaacaaaaatagta  13398500
                                                                                --------->YAB1
                                                                             <----------DOF2
                                                                           ------>MYB83
                                                                           ------>MYB46(1)
                                           <-----------HVH21             <---------MYB111(2)
      --------->AHL20(2)           <---------ICU4                        <---------MYB111(1)
      <---------AHL20(2)           --------->YAB1                        <---------ALFIN1      <----
     <---------AHL20(2)      --------->GLK1(2)                          <------NtERF2         ------
 <---------YAB1     <---------GLK1(1)   <---------bZIP60(2)            ------>NtERF2         -------
 
tgctataatttatatgaaaatcgaaatctgagaatcaagaatgacatgtcaaaacaatagccctcttacaatggcaccaactttcatggttttgagaccg  13398600
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AGI:  At4g26540.1   
Description:  protein kinase family protein. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G24240.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G56040.1); similar to leucine-rich repeat protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G56040.2); similar to putative receptor protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAD10022.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45188.1); similar to hypothetical protein OsI_028697 [Oryza sativa (indica cultivar-group)] (GB:EAZ07465.1); contains InterPro domain Serine/threon
Range:  from: 13394528    to: 13398097    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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