Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     ------>ZmHOX2a(1)                                                 <------------MYB.PH3(2)                                       <---------GLK1(1)         ----------->RAV1(2) ---->ZmHOX2a(2)                       --------->GLK1(1)  ===================RAV          --------->YAB1 ------>GLK1(1)             <---------ANAC58   --------->ZAT6    <---------At4g35610      <---------ICU4 -------GLK1(1)         ------>ZmHOX2a(1)   ------>ZmHOX2a(1)  <---------PCF2             <--------HAHB4 ----->ARR11(3)        --------->TOE2(3)--------->ARR14(2)<-----------RAV1(1)         <---------AHL20(2) --->TEIL------>ZmHOX2a(1)  <---------ANAC58==================================HOX2a_HOX2a<---------YAB1 ------ARR11(3)   <---------ARR11(3)--------->ANAC58    <----------DOF2------>ZmHOX2a(2)<-----------GT1 ------AGP1       --------->ARR11(3)--------->ANAC58 <-----------------AGL3    --------->ANAC46   atctctccgtcctcttccaacatctccttagcgttctcaagaaatcctctcactaactctttgtggctcctgatccaaaacacagcattttatcattaca  13378000                                                  <---------ANAC58                                                  <---------ANAC58                     <---------YAB1             <-----------GT1                     <---------AHL20(2)     <---------ARR11(3)                  <---------AHL20(1)        --------->ARR11(3)                  --------->AHL20(2)        <---------AHL20(1)                  --------->AHL20(1)        <---------AHL20(2)                  <---------ARR11(3)        --------->AHL20(2)    <---------STY1(1)  ---------->DOF2        --------->YAB1--------->YAB1 ---------->DOF2<---------MYB52(1) <------ZmHOX2a(1)  --------->CCA1(2)       <---------ATHB12  --------->YAB1     --------->AHL20(1)    --------->STY1(1) --------->AtMYB61   tcagtccaaatcataaactatatattatagtaagaaaatgaaagaatatatttcgttactcgatggccctagaggacaattcacgaccaaagaaacgaga  13378100                                                                             <---------WRKY12                                                                          --------->bZIP60(2)                                                                          --------->ANAC58                                                                          --------->ANAC46                                                                          --------->ANAC58                                                                         ------->TEIL                                                                       <---------ZAT14                                                                       <---------ZAT18                                                                       --------->ZAT18                                                                     <---------ZAT18        <------ZmHOX2a(1)                                           <---------ANAC58       ----------->GT1                                              <---------ANAC46  <---------ANAC58           --------->YAB1                  ----------------------->TaNAC69(2)  <---------ANAC58         <-----------HVH21                <---------At4g35610     ------->PIF5  <---------ANAC46        ----------->GT1           <---------YAB1  <---------ANAC58<-------PIF5 <---   ccctgcgtgaggaaaattgaagacaatgcggtcataacgttgcagactcaaactattatcgaagctcattgtgtgcacgtcaacctcgtgctgaatatca  13378200     <---------CCA1(2)    <---------ARR11(1)    --------->ARR14(2)    <---------ARR14(2)                    <---------AHL20(2)    ------->TEIL<---------YAB1           <---------ARR11(3)    <-----------ARR10           --------->DEAR3(1)                              --------->ATHB12   <---------ARR14(1)          --------->ANAC46                            --------->AHL20(1)   <---------CCA1(2)         <---------ALFIN1                              --------->AHL20(2)  --------->LBD16            --------->ANAC46                              <---------YAB1 --------->ANAC55(2)        --------->MYB46(3)<---------AHL20(2)           <---------AHL20(2) --------->ANAC46    <---------TOE2(3)   <---------AHL20(1)               --------->AHL20(2)      --- ------ALFIN1  <---------ARR11(3)       <---------CCA1(2)         ----------->GT1              ------   cacccgtatctcttcaatatgtttatgttatccaccgcatccatatattttatgctcagttcatctacatgtaaaattttattgatttaagtcaatacat  13378300                              <---------YAB1                                                       <-                            --------->YAB1                                                  <--------                           <---------YAB1   <---------AHL20(2)                             <-------TEIL          <---------ZAT6   <---------AHL20(2)                       --------->GLK1(2)<---------MYB52(1) ------>MYB52(2)        ------->TEIL       --------->AHL20(2)      <---------GLK1(2) <---------ARR14(2) --->TOE2(3)  ------>ZmHOX2a(2)      <-------TEIL     <-----------GT1              <---------TOE1(2)   tagttacgactagtgatcgatagatgtatattataaatgttcatataaaatgggttttacataccttcagaatcgagagaggtcgcagttatgttcatgg  13378400                                                                            <---------ZAT14                                                                          <---------YAB1                                                                    --------->ZAT18                                                                    <---------ZAT18                                       <-----------GT1           <---------ANAC58                                     --------->HSFB2a(1)         <---------ANAC58                                     <---------HSFC1(2)        <---------ANAC46     ---------->DOF2                 --------->HSFC1(2)    --------->ARR11(3)      <---------ANAC58 -----NtERF2                         <---------HSFB2a(1)  <------ZmHOX2a(1) --------->ZAT14         - -AtLEC2--------->At4g35610     --------->YAB1--------->HSFB2a(2)<---------ANAC46  <---------ANAC58 <   ccgagccaaaagctgaagctagacatagtgagaatgagaagtttccttctccaactagaaggattttgtgtgtgctactatagtgtcttatccatttttc  13378500                                                                                               <-----                                                                                           ----------              <---------ARR14(2)                                                   <----------DOF2              --------->ARR14(2)              <---------AHL20(2)                  <---------ANAC58             <---------CCA1(2)                --------->AHL20(2)                  <---------ANAC58           <---------ANAC55(2)                <-----------TBP                  <--------P  <---------ANAC46           --------->ANAC55(2)              --------->AHL20(2)              <---------TOE2(3)  ------ -------->GLK1(1)                    <-----------GT1    --------->YAB1    ---------->DOF2  <---------ANAC58 ---------GLK1(1)       <----------DOF2     <-----------TBP          ----------->RAV1(1)   <---------ANAC58   tgaaatctccattacatatctgaagactttgtattctataaaccatatatatatacactcatatagagtcacaacacaaaggttgcttcagtgtcgttta  13378600                                                               <---------ANAC58                                                               <---------ANAC58         -------------                                      <---------ANAC58      <---------WOX13(1)         <---------ANAC46                                      <---------ANAC46     <------------CBF            <---------ANAC58          ----------->GT1             <---------ANAC58    ------>MYB46(1)          <----------DOF2        <------------CBF          <---------ANAC58        ------>MYB83       --------->ARR14(2) ----AHL20(2)                     <---------ANAC46      <---------MYB59<----------DOF2 <---------ANAC58 ->GT1<-------TEIL                <---------ANAC58      --------->TOE2(3)    <---------ARR14(2)------ --->AHL20(2) <---------AHL20(2)<---------ZAT14       ------->TEIL<-----------GT1 <---------DAG2    <   attttgggttcattgttaaattcggctcttcgagttctgtgcgtgtttatatttcgaacctaattgcttaaccctttcatatacccttttcttgtactaa  13378700                                    ------>ZmHOX2a(2)                                   <------ZmHOX2a(2)                                  --------->ARR11(3)                                  <---------ARR11(3)                                  --------->ARR14(2)                                  <---------ARR14(2)                     --------->AHL20(2)                                 <------ZmHOX2a(1)                     <----------DOF2                               --------->MYB59                  --------->ATHB51                              --------->YAB1                    -------->ATHB1                             --------->ICU4                     <---------ICU4                           --------->ATHB51                    <---------ATHB51<---------ANAC46                           <--------HAHB4                      --------->ICU4 --------->MYB59                           <---------ICU4       --------->ARR14(2)    --------->TOE2(3) -->AtSPL8                <---------YAB1        <---------ARR14(2) <-----------GT1 --->YAB1                 --------->ICU4   <---------ARR11(3)  --------->AHL20(2)              ------ -----------GT1         --------->YAB1    --------->RVE1(1)    <---------AHL20(2)              <-----   taaaaccgtttcacattcaattctactcataattaggatcttaaatatcgtatttgaaacttcaaattattacctttaattcggtatagaaaactagttt  13378800                                                                 <-------MYC3                                             -------->ATHB1      <-------MYC2                                             --------->ATHB12    ------->MYC3                                             --------->ATHB51    ------->MYC2                                             <---------ICU4     --------->ANAC55(2)                --------->ARR11(3)          <---------ATHB51    <---------ANAC55(2)                <---------ARR11(3)          <---------AHL20(2)  --------->ANAC46                --------->AHL20(1)          --------->ICU4      <---------TGA1a   --------->CCA1(2)               --------->RVE1(1)            --------->AHL20(2)  --------->O2     --------->ARR11(3)               --------->CCA1(1)          ------>MYB46(1)       <---------O2     <---------ARR11(3)           --------->AHL20(2)             ------>MYB83          --------->TGA1a  --------->AHL20(1)    --------->At5g28300              <-----------GT1      --------->AHL20(2)     <---------AHL20(1) <   ----------->GT1              ----------->GT1           <---------AHL20(2) --------->YAB1         - --->ZAT14 <---------AHL20(2)  <---------TOE1(3)       --------->YAB1      <-----------GT1      ----- ----ZAT18 --------->AHL20(1)  <---------TOE2(3)     --------->ICU4  ----------->GT1         <-------   actcactgtaaaataaaatatcttggtcattctatggttaaaccaaattattgccaatattaaaacacgtgaggttttatcaagatattagtatattact  13378900  Previous    Next  AGI:  At4g26480.1    Description:  KH domain-containing protein. similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G56140.1); similar to hypothetical protein OsI_008574 [Oryza sativa (indica cultivar-group)] (GB:EAY87341.1); contains InterPro domain K Homology; (InterPro:IPR004087); contains InterPro domain Nicotianamine synthase; (InterPro:IPR004298) Range:  from: 13372893    to: 13378398    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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