Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               -------->HAHB4            --------->AHL20(2)           <---------YAB1    --------->YAB1          --------->AHL20(1)<---------ATHB12          --------->AHL20(2)<---------YAB1                                            --------->GLK1(1) <--------ATHB1            <---------TOE2(3)            ---------->DOF2      --------->YAB1        <- --------->YAB1           --------->YAB1         --------->AHL20(2)     <---------HSFB2a(2)      ---- ---------ATHB51      --------->ZAT6         <---------AHL20(2)         --------->HSFB2a(2)  -------- ---------ATHB12     --------->ZAT18         --------->AHL20(2)   --------->DAG2   ------->GAMYB <--- ->ZmHOX2a(2)<---------AHL20(2)             --------->AHL20(2)   ---------->DOF2--------->MYB52(1)<--   caataatacaaatattatataagaacactaatgatacaatttgattttaaattaaaaccaaagatgaaaaagttctgaaacataaccgaaatctataaat  13368200                                                                     --------->TGA2(2)                                                                    <-----------TGA1                                                                   <---------ANAC58                                                                   --------->ANAC58                                                                   --------->ANAC58                                                                   <---------ANAC58                                                                   <---------ANAC55(2)                                                                   --------->bZIP60(1)                                                                   <---------bZIP60(1)                                                                   --------->ANAC55(2)                                                                   --------->TGA2(1)                                                                <---------MYB52(1)  --------->ARR11(3)                                           <-----------HVH21         ------>MYB46(1)  <---------ARR11(3)                                          --------->O2               --------->ANAC58 ----------GT1                                                <---------TGA1a     --------->AtMYB61 ----->AHL20(2)                                               <---------O2  <---------ICU4 ->AHL20(2)                   <-------TEIL                    --------->TGA1a ------>ZmHOX2a(1) ------AHL20(2)         <---------MYB59              ------>ZmHOX2a(1)  --------->ICU4   --------->ANAC58 ---------GT1        <------ZmHOX2a(1)         --------->HSFB2a(1) <---------TGA2(1)     ------>MYB83   taaacatctctagcttatagacaggaccaaaattcatgtaagagtacaaatgttcctagttccgacgttacgtcataatcctcaccataccaagctatat  13368300                  <---------YAB1                             --------->AHL20(2)                --------->YAB1                      <---------ANAC46 --------->DAG2               <---------YAB1                       --------->ANAC55(2)   --------->AHL20(1)                               <---------ANAC55(2)      XXXXXXXXXXXXXXXXXXXX>MIR3933   <---------AHL20(1)      <-------TEIL            <---------TOE2(3)---------->DOF2 <-----------GT1   <---------ARR11(3)      ------->TEIL   <-----------GT1 --------->YAB1    ----------->GT1      <---   atcaatatatcatacatatcataaatatgtacatgagtctatattcacacattgacgtaaacataaaatgaaaagcagaagtaaattaacaaatcggatt  13368400                                             --------->HSFC1(2)                                             <---------HSFC1(2)                                             --------->HSFB2a(1)                                      ----------->HVH21                                      ----------->TGA1                                    <---------ANAC58                               <---------ANAC58                           --------------->AGL15           -------->P                <------ZmHOX2a(1)   <---------AtLEC2      --------->MYB52(1)          <------ZmHOX2a(1)<----------DOF2   <---------HSFB2a(1)                              -------      ---------->DOF2<----------DOF2<---------ANAC58     ----------->HVH21       --------->ANAC46     <---------AHL20(2)    <---------------AGL15        <---------MYB52(2)       --------->ANAC58   -    <---------AHL20(2)     <---------DAG2   <---------TOE2(2)  <---------TOE2(2) --------->ANAC58   -    --------->AHL20(2)  <-----------GT1     <---------TOE1(2)------->GAMYB     <---------ALFIN1     - --------GT1  <---------TOE2(3)<---------ANAC58       --------->ZAT6  <---------YAB1         --------   aacaaattaaaaggatgaggatgcttttacttttcttggcatgacgaaggttccttccactaaccgaggtttgtgattcaaacacaccatctacagaaag  13368500                                                                <---------ARR14(2)                                                                --------->ARR14(2)                                                              --------->ANAC46                                                             --------------->AGL15                                                             <---------------AGL15                                                            <-----------------AG                                                            ----------------->AGL1                                --------->ALFIN1            <-----------------AGL1                             <---------MYB46(3)             <-----------------AGL2 ------>NtERF2               --------->MYB55(2)             ----------------->AGL2 -->DAG2                    <---------ANAC46               --------->MYB52(1) ---------->HVH21    <---------TOE2(3)             ---------->DOF2                            ------>MYB83 -------->DEAR3(1)  ---------->DOF2           ----------->RAV1(1)                             ------>MYB46(1) -------->MYB46(3) --------->AHL20(2)        <----------ID1-------->P                        -------- -->DOF2           <---------AHL20(2) ------------------------>ANAC81            <------ZmHOX2a(1) <-   cgacgacccattagaaacaaattaaagatggagggtggagaaggaagacaacaaaaagacatacccgatatggaacttgaagaggagagagataccaaca  13368600                           <---------At4g35610                           --------->ZAT2                 <-----------GT1                    <---------ICU4                     ----------->GT1       ---------->DOF2     --------->At4g35610       <---------ANAC58    --------->YAB1  --------->AHL20(2)              --------->HSFC1(2)                ---------->DOF2 <---------bZIP60(1)--------->YAB1                  <---------HSFC1(2)              <------ZmHOX2a(1) --->RAV1(1)     --------->YAB1               ---------->DOF2      ---------->DOF2 <----------ID1 --------ZAT18--------->YAB1         <------------CBF<---------ANAC58         <---------ANAC55(2)   gtgccatcagaaagaagaataataatatcagctccatgaaattgttgttaaagaagcttgtaacattttcaaagaagaatacataaggaaaagagttatg  13368700                                                         <---------AHL20(2)                                                        --------->AHL20(2)                                                        <---------AHL20(2)                                                     <---------ICU4                                                    <---------ATHB12                                                    --------->AHL20(2)                                                    <---------ATHB51                                                    <---------AHL20(2)                  --------->AHL20(2)                                             --------->ANAC58                           --------->YAB1                             <---------MYB52(1)     --------->ICU4                     <---------ATHB12                  <---------AHL20(2)         --------->ANAC46                      ------------>CBF                  <---------AHL20(1)         --------->ANAC58                      <---------ATHB12                  --------->AHL20(2)         <----------ID1                  <-----------GT1      ---    <---------AHL20(2)      ------->GAMYB  ---------->DOF2              --------->AHL20(2) <---------AHL20(1)   gcgaaattaatgtcttacaaaaaatttcaacggtagtcgtttcaaaaacgccaaataattaaataactaaaatataaaataaccattcaataatatatgt  13368800        --------->ICU4                                                 --------------->AtSPL8   <---------ANAC55(2)                                             --------->ARR11(3)   <---------ANAC46                                                --------->ARR14(2)   <---------ANAC58                     --------->DAG2             <-----------ARR10   ----------->GT1                    ---------->DOF2              <---------ARR11(3)           -----   --------->ANAC55(2)          --------->ICU4                    --------->RVE1(1)      <----------DOF2   <---------ANAC58        ----------->GT1                        --------->CCA1(1)     <---------ANAC58 ------>MYB52(2)       --------->ARR11(3)    <------NtERF2      --------->YAB1          <---------ANAC58   ttgtttcgtaattaagaaccccaaacatctagtaattttcaaaaggccccttaaattttgagaccataatatcttcgtactctaaaactggctttgtata  13368900                                    <---------STY1(2)                                    --------->STY1(2)                                   <---------AHL20(2)                                  ------>ZmHOX2a(1)                                    --------->YAB1     ---------->DOF2         <----------DOF2                                          <---------YAB1   --------->AHL20(2)     <---------ARR11(3)                                       <---------YAB1   <---------AHL20(2)     --------->ARR11(3)                               ---------->DOF2<---------- ----->DOF2           ---------->DOF2                        <---------AHL20(2)  <------ZmHOX2a(1)   aagaattaaaagacttatctaagacaaaggtctttcctagctactagagtagtaagaccatagataattgtttgatataaagaggattattataacgatt  13369000                                           --------->YAB1                                          ----------->GT1                                          <---------YAB1                                        --------->YAB1                                        <---------ICU4                                       <---------ATHB12                               --------->ARR14(2)                                       --------->ICU4                                 <---------ARR14(2)                                       <---------ATHB51         <XXXXXXXXXXXXXXXXXXXXMIR1886.3                                   --------->ZAT14              XXXXXXXXXXXXXXXXXXXX>MIR1886.2                                   <---------ZAT18        --------->GLK1(2)--------->AHL20(2)                                   --------->ZAT18       <---------GLK1(2) <---------AHL20(2)                                   <---------ZAT14 ---------->DOF2       <----------DOF2                            <---------ETT(2)      <---------AHL20(2)  --------->ARR11(3) -GT1                       --------->ETT(2)      --------->AHL20(2)  <---------ARR11(3)   tatgtataaattgacaaatttagcctaaggtcgatagtgcaataatgaaaatttaaagagattctaaaatgaaatctttaaattttcgaattctcaagtt  13369100  Previous    Next  AGI:  At4g26450.1    Description:  WIP1 (WPP-DOMAIN INTERACTING PROTEIN 1); protein heterodimerization/ protein homodimerization. similar to WIP2 (WPP-DOMAIN INTERACTING PROTEIN 2), protein heterodimerization/ protein homodimerization [Arabidopsis thaliana] (TAIR:AT5G56210.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80099.1) Range:  from: 13362564    to: 13368686    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g26466.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56170.1); similar to GPI-anchored protein [Vigna radiata] (GB:BAA34247.1) Range:  from: 13367653    to: 13368637    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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