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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                         ---------->DOF2
                                                    <---------------AGL15
                                                   =================================================
                                                   ------>ZmHOX2a(2)
                                                  <------ZmHOX2a(2)
                                                 --------->ARR14(2)
                                                 <---------ARR11(3)
                                                 --------->ARR11(3)
                                                 <---------ARR14(2)                            <----
                                                 --------->AGP1                          ---------->DOF2
                                                 <---------AGP1                       --------------
                        ---------->DOF2         <---------CCA1(2)                     <-------------
-->RAV1(1)   --------->ANAC58                <---------At4g35610                   --------->ZAT6
-ID1         --------->ANAC58       <----------DOF2----------------->AGL3   ---------->DOF2   ------
 
aaaaaaaaacatgaagaagcaaacctataaagtttcgacctttgtttcatcagatctaaataaagagaatggtattcccaaaagtttcactaaaaagagg  13346200
                  --------->ATHB12
                  <---------ICU4                                                   ------->GAMYB
      <---------ICU4                                                               --------->TOE2(3)
 <---------ARR11(3)    --------->At4g35610          <----------DOF2                --------->YAB1
 --------->ARR11(3)--------->TOE2(3)             --------->ANAC58                 --------->MYB46(3)
==MADS_MADS      <---------YAB1                  --------->ANAC58                -------->P
--ZmHOX2a(1)  ------>MYB83                   --------->ANAC58                   --------->WOX13(1)
->AGL15       ------>MYB46(1)                --------->ANAC58                 <------ZmHOX2a(2)    -
--AGL15      ----------->RAV1(1)             --------->ANAC46        <---------KAN4(2)          ----
----->GT1  --------->MYB46(3)         ----------->RAV1(1) --------->AtLEC2   --------->AGP1     ====
 
ataatatcatcttcaccaacatcattagctcaagtttcagacaacaaaacgcaagctttctatgcaaatgcgaataaacagatcaaccaaaatttgcctc  13346300
                                                                 <---------AHL20(2)
             --------->YAB1     --------->AtLEC2                 --------->YAB1
--------->DOF2  <---------GLK1(1)  ---------->DOF2               --------->AHL20(2)
----------->AGL15             --------------->AGL15  <---------YAB1
==============================================MADS_MADS    ----------->GT1
 
tataaagagataacaatagaaatcagggctaatccatgaaaagaaaactctcaattctcatggagtaattaaaacaaaacaaatacaaaaacaaaccttg  13346400
                                                       ------>ZmHOX2a(2)
                                                      <---------GLK1(1)
                                                      --------->GLK1(1)
                                                      <------ZmHOX2a(2)
                                                     <---------ARR11(3)
                    <---------HSFB2a(2)              <---------AGP1
                  ==============================HOX2a_HOX2a
                  =================================HOX2a_HOX2a
                  --------->CCA1(2)                  --------->ARR11(3)
                  <------ZmHOX2a(2)                  --------->ARR14(2)
                 <---------ARR11(3)            <----------DOF2
                 --------->ARR11(3)         =================HOX2a_HOX2a
                 --------->ARR14(2)      ====================HOX2a_HOX2a
                 --------->AGP1          ------>ZmHOX2a(1)  --------->ANAC46
                 <---------ARR14(2)      =====================HOX2a_HOX2a               ---------->ID1
                --------->GLK1(1) <---------ARR11(3) <---------ARR14(2)           <---------AHL20(2)
                <---------GLK1(1) --------->ARR11(3)<---------CCA1(2)            <---------AHL20(2)
         <----------DOF2    --------->ANAC58------>ZmHOX2a(1)                <---------DAG2      <--
         <---------DAG2     --------->ANAC58==================HOX2a_HOX2a    <----------DOF2     ---
 
taaatgttcttacttttggagatccagagggaagaaatgtcttcctccttcttttagatctccacgaagataaatgagagcttttttatttgtcttcttc  13346500
                                                                                                   -
                                                                                                   -
             ------------------------>ANAC81                                                       -
        <---------MYB46(3)                                                                        <-
       <---------ANAC46                                                                      -------
       --------->ALFIN1                                                                      -------
 --------->ARR14(2)                   ---------->DOF2              --------->DAG2       <---------At4g35610
 <---------ARR14(2)               <------ZmHOX2a(1)               --------->DAG2        --------->At4g35610
-------At4g35610          <------ZmHOX2a(1)                      ---------->DOF2      --------->ZAT18
------>At4g35610    ---------->DOF2  <------ZmHOX2a(1)    ------------------------>ANAC81 --------->DEAR3(1)
 
tgcagaaatggtgggagacgaagaaaagaggaatgaaggaggaaaggaagacgaagatgaagacgaagaaaagggaatgtaatgtatagttcgcagaccc  13346600
                                       --------->LBD16
     *TSS      --------->ANAC46      <------NtERF2
  ---------->DOF2             ---------->DOF2  --------->YAB1
-------->TOE2(3)           <-----------TBP  <---------CCA1(2)
-------->TOE1(3)--------->LBD16      --------->ATERF1(1)
-------->YAB1  ------->GAMYB <---------AHL20(2)--------->TOE2(3) ------>MYB83
--------ATHB12 --------->RAP2.6(2)   <---------LBD16          *TSS
-->ANAC58     --------->MYB46(3)    --------->ZAT2<-----------GT1------>MYB46(1)
-->ANAC58    <---------At5g28300   <---------ARR14(2)    --------->AHL20(2)                   <-----
 
aatcttaaagcccattaaccgcaaactgatatataaaggagccgggtctatcttaaccatttaaaaccaacttctaatttggaatcaaattgaaccgaat  13346700
                                                                                         --------->DOF5.7(2)
                                                                                        <----------DOF2
                                                                                        <-----------HVH21
                                                                                     --------->LBD16
                                                                                    ------->GAMYB
                                                                                    --------->DEAR3(1)
                                                                                   --------->MYB46(3)
                                                                                   --------->DEAR3(2)
                                                                                   <------------AtMYB77
                                                                                  --------->MYB52(1)
                             <---------ANAC58    ----------->GT1              --------->ANAC46
                          --------->DAG2   <---------HSFB2a(2)                --------->ANAC58    --
                        ---------->DOF2--------->LBD16                        --------->ANAC58   ---
                    <------ZmHOX2a(1) <---------ANAC58<---------ARR14(2)--------->ARR14(2)      <---
                   ----------->GT1    <---------ANAC58--------->ARR14(2)<---------ARR14(2) <--------
------ARR10  ---------->DOF2 <---------ANAC58 ---------->DOF2   <----------CDC5   -------->P    <---
 
cgaaccggttgaagttgaaagaaggagaaaaggcgttgtctccgtgcgagaaaggcaaatcggagacgatgagcgaaaccgaagcaaccggcgttaccga  13346800
     ------>NtERF2                                            <---------MYB46(3)
   <---------At4g35610                                        ----------->GT1
   --------->At4g35610                                       <---------AtMYB61               -------
------->ARR11(1)                                             --------->ALFIN1                <------
------>ATHB12                                           ------>ZmHOX2a(2)                  <------ZmHOX2a(1)
------ATHB12                                           ===============================HOX2a_HOX2a
-DOF5.7(2)                              --------->ALFIN1==============================HOX2a_HOX2a
------YAB1                       <---------At4g35610   <------ZmHOX2a(2)       <------ZmHOX2a(1)
 
tgattcggctccagcgattgagactgaaactgtttctgatgcgatggagcatacagcgatcggagtggttgaatcggtggaaggagccatagaaggagca  13346900
           --------->ATHB12
        <---------ANAC58
        <---------ANAC58<---------DEAR3(1)
        <------MYB46(1)--------->SPL7
        <------MYB83 ----------->HVH21
        ----------->GT1<---------ORA47(1)
       --------->MYB111(2)
       <---------DEAR3(1)
       --------->MYB55(2)
       <---------MYB46(3) --------->At5g28300
      --------->ALFIN1--------->MYB52(1)             <---------ANAC58
    <---------ANAC58 <---------SPL7                  <---------ANAC58
    <---------ANAC58 ------->GAMYB        --------->ARR14(2)
--------->CCA1(2)   <---------MYB52(2)    <---------ARR14(2)            --------->LBD16     --------
-->At4g35610        --------->MYB46(3)   <------ZmHOX2a(1)             <---------ANAC46     <-------
---At4g35610       <---------At4g35610 <---------TOE1(2)   <---------At4g35610    <-----------GT1
 
gagaaatgggtgggtgatttgcaacggacggtgaaggaatcgaaggataccgcaatgcgttctgctcgttccctccgtgaaaattctacctctcagttcc  13347000
                                                --------->ARR14(2)
                                             <---------ANAC58
                                             <---------ANAC58
          ----------->GT1         ------>MYB83  <---------ARR14(2)                             -----
        <--------P                ------>MYB46(1)                                             ------
 --------->ZAT14                --------->MYB46(3)                               --------->GLK1(1)
 <---------ZAT14      <----------DOF2   <---------ICU4                           <---------GLK1(1)
->ARR14(2)--------->MYB46(2)    <---------MYB46(2)                             <------ZmHOX2a(1) <--
--ARR14(2)--------->MYB52(2)   --------->ANAC46 --------->GLK1(2)           <---------LBD16   <-----
 
gctctatacaggttagttaatctctcttttgttcaccaaacaatttttgcgaatcgagattgtttaccaaaaaacattttcaggatttcaaaccatggat  13347100
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AGI:  At4g26400.1   
Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G56340.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22124.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841)
Range:  from: 13344817    to: 13346606    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At4g26410.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22126.1); contains InterPro domain Uncharacterised conserved protein UCP022280 (InterPro:IPR016803)
Range:  from: 13346663    to: 13349025    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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