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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ICU4
--------->
YAB1
<---------
ZAT14
<---------
AHL20(2)
--------->
ZAT14
---------
ZAT14
<---------
HSFB2a(2)
--------->
AtMYB61
-------
ZAT18
--------->
TOE1(3)
<---------
ARR11(3)
<-------
TEIL
------>
ZAT14
--------->
TOE2(3)
--------->
ARR11(3)
--------->
ARR14(2)
---------->
AtSPL8
--------->
HSFB2a(2)
<---------
GLK1(2)
<----------
DOF2
-----------
AtSPL8
<----------
DOF2
<-----------
GT1
<---------
ARR14(2)
tgtacacatattaatgaccttaaaccattctttatagaagagaccttgattttacttactcttgctccaagattcaccaaaactacactttctcaatact
13332500
>>>>>>>>>
ARR1
>>>>>>>>>
ARR2
------>
NtERF2
--------->
LBD16
--------->
HSFC1(2)
<---------
HSFB2a(1)
--------->
HSFB2a(1)
<---------
ARR11(3)
--------->
bZIP60(2)
--------->
ARR11(3)
<------
MYB83
--------->
ANAC58
---------->
DOF2
<---------
GLK1(2)
<---------
WOX13(1)
<---------
ICU4
--------->
HSFB2a(2)
<------
MYB46(1)
--------->
ATHB12
--------->
TOE1(2)
--------------->
AGL15
<---------
YAB1
--------->
WRKY18(1)
--------->
ANAC46
<---------------
AGL15
<---------
TOE2(3)
--------->
WOX13(1)
--------->
ANAC58
===========================================================================================
<-----------
GT1
<----------
DOF2
--------->
MYB59
<---------
At4g35610
------->
TEIL
--------->
AHL20(2)
<---------
HSFC1(2)
<---------
MYB52(1)
<---------
YAB1
----------->
RAV1(1)
agtcattttatactcattaaagaactttcccgactaagattgtctgtttggtcaatctatttagatgattggattccacgacatatgtaccagcgagtga
13332600
<-------
<-------
<-------
------>
NtERF2
<---------
YAB1
--------->
At4g35610
<---------
MYB46(3)
<---------
ARR14(2)
--------->
ANAC58
----------->
RAV1(2)
--------->
ARR14(2)
--------->
ANAC58
--------------->
AGL15
<---------
MYB52(1)
--------->
YAB1
<---------
At4g35610
<---------------
AGL15
<---------
LBD16
<---------
ICU4
--------->
At4g35610
<----------
DOF2
<---------
AtMYB61
--------->
LBD16
--------->
ZAT18
--------->
ZAT2
---
<-----------------
AGL3
<---------
AHL20(2)
<---------
ZAT18
<---------
ZAT2
<--
=================
MADS_MADS
<-----------
GT1
<---------
TOE2(3)
<---------
ATHB12
<--------
P
<---------
At4g35610
tgctctttttttggtacctggtggttctatttacttccggttatgttaagaattttgtgaactaatcatgttttttttgggttagctcgcctctgccgtg
13332700
<---------
TOE1(3)
----------->
HVH21
--------->
MYB59
--
ANAC58
<---------
TOE2(3)
--
ANAC58
--------->
AHL20(2)
-
--
ANAC46
<---------
AHL20(2)
<--
------>
HSFB2a(2)
<---------
TOE2(3)
---
-------
HSFB2a(2)
<---------
ZAT6
<-------
TEIL
<---------
AHL20(2)
<--
ctcgaagtctgactggtttggctagagttactgaaacagagtttatttgctattgtttaaaatgtttaggctcatctaagattaatttaggttgaactaa
13332800
<---------
YAB1
------>
ZmHOX2a(2)
--------->
ICU4
<------
ZmHOX2a(2)
<---------
ICU4
--------->
ARR14(2)
-------->
HAHB4
<---------
ARR14(2)
--------->
YAB1
<---------
ARR11(3)
<---------
TOE2(3)
<---------
ATHB51
--------->
ARR11(3)
------>
ZmHOX2a(1)
--------->
ICU4
--------->
ARR14(3)
--------->
LBD16
--------->
YAB1
<---------
ARR14(3)
<---------
LBD16
<---------
AHL20(2)
----------->
GT1
--------->
AGP1
----------->
RAV1(2)
--------->
AHL20(2)
<--------
P
<---------
GLK1(1)
-------->
ARR11(3)
<---------
AHL20(2)
<------
MYB83
--------->
GLK1(1)
-------
ARR11(3)
<---------
AHL20(1)
<------
MYB46(1)
<------
NtERF2
<----
------>
ARR11(3)
--------->
AHL20(1)
<---------
AtMYB61
<xxxxxxxxxxxxxxxx
smallRNA(le3)
-------
AHL20(1)
--------->
AHL20(2)
--------->
MYB111(1)
<xxxxxxxxxxxxxxxxxxx
tatatcctggagagtttatggatgaactaatttaataatgag
tatcaaatatgagttggtagataaacagtagaaaactaaggcctcagagatcttggtg
13332900
--------->
bZIP60(1)
<---------
bZIP60(1)
--------->
TGA2(1)
<xxxxxxxxxxxxxxxx
smallRNA(fl3)
<xxxxxxxxxxxxxxxx
smallRNA(fl3)
<xxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
--------->
At4g35610
<---------
YAB1
--------->
YAB1
<---------
AHL20(2)
<---------
ICU4
<---------
AHL20(2)
<---------
ATHB12
<xxxxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
<--
------>
MYB46(1)
*
TSS
<---------
ARR11(3)
<---------
AHL20(1)
---
------>
MYB83
<----------
ID1
<---------
ARR11(3)
---------
--------->
WOX13(1)
---------->
DOF2
--------->
ARR11(3)
--------->
DAG2
-----
MYB46(3)
------->
GAMYB
--------->
ARR11(3)
--------->
AHL20(1)
<------
NtERF2
---------->
DOF2
x
smallRNA(se3)
---------->
DOF2
----------->
GT1
<-----------
GT1
------------>
CBF
<---
gtaaaccaatcatcaactga
aagaacaaagttcttcatcaagagtagcaaatatttttattacatcactggcctcattcaaaaacaattcaaaagtggaa
13333000
--------->
ARR14(2)
--------->
GLK1(1)
--------->
SPL7
--------->
GLK1(1)
--------->
LBD16
<---------
GLK1(1)
-------------
AGL15
--------->
YAB1
--------->
LBD16
--------->
GLK1(1)
--
------------>
AGL15
----------->
GT1
--------->
At4g35610
<---------
HSFB2a(2)
--------->
GLK1(2)
>
ALFIN1
<---------
GLK1(1)
--------->
At5g28300
--------->
HSFB2a(2)
<---------
ARR14(2)
--------------
AGL3
--------->
YAB1
<---------
At4g35610
<----------
DOF2
---------->
DOF2
<--
cttattttgggaaatctatatcgatgatggtaaaatcagaagtagctggtttgtgatcacatctttcccgagggaattcaaagggaatccgaacgatttt
13333100
-
<---------
YAB1
<-
<---------
At5g28300
---------->
DOF2
--
<-----------
GT1
<---------
AHL20(2)
----
<----------
DOF2
--------->
AHL20(2)
<----
<-----------
TGA1
<---------
AHL20(2)
<---------
ARR11(3)
-----
-------->
ID1
--------->
AHL20(2)
--------->
ARR11(3)
--------->
DAG2
---------
GT1
--------->
AHL20(2)
---------->
DOF2
---------->
DOF2
tttcgtcatcttttaccatcaaaaaaatttatcaaagaaaatgtcataaaagacctcaaaaaacgttttctaaatcggcgaaaaacaaaaaaggtgttat
13333200
<---------
YAB1
<---------
YAB1
---------->
ID1
--------->
ICU4
<-----------
GT1
--------->
YAB1
---------->
DOF2
<xxxxxxxxxxxxxxxx
smallRNA(fl3)
--------->
ICU4
--------->
GLK1(1)
<xxxxxxxxxxxxxxxxxxx
smallRNA(se3)
<---------
YAB1
--------->
LBD16
--------->
ARR14(2)
-------->
YAB1
<---------
HSFB2a(2)
--------->
ATHB12
--------
YAB1
--------->
YAB1
--------->
LBD16
--------->
GLK1(1)
------->
ICU4
<---------
AHL20(2)
<------
ZmHOX2a(1)
<---------
ATHB12
----->
YAB1
--------->
AHL20(2)
<---------
LBD16
<---------
GLK1(1)
-----
YAB1
--------->
At4g35610
<---------
HSFB2a(2)
<---------
ARR14(2)
------>
ZmHOX2a(1)
---->
ICU4
<---------
At4g35610
--------->
HSFB2a(2)
--------->
GLK1(2)
<-----------
TGA1
<-
gatgatgatgatgagtcagaagtagctgattatataatcacatgtttcccggaggaattcaaagggaatccgaatgattttttcgtcatcctcaccatca
13333300
--------->
AHL20(2)
--------->
TOE1(2)
---------->
DOF2
--------->
AHL20(2)
--------->
TOE2(2)
--------->
ANAC46
------->
GAMYB
--------->
ANAC46
--------
ARR11(3)
--------->
MYB46(3)
--------->
ARR14(2)
<--------
atatcaatactgctccacaaaagttccaatattcaaccaaaaaataaacacaaaacattcaaatctacgactaagaagaaaactacagataaggctttgc
13333400
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AGI:
At4g26365.1
Description:
snoRNA. snoRNA
Range:
from: 13332843
to: 13332920
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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