Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <---------ARR11(3)                                            --------->ARR11(3)                                          <---------YAB1                                        --------->YAB1                                <---------YAB1 <----------DOF2                              <-----------GT1 ------>ZmHOX2a(2)                     --------->ANAC58   -------->HAHB4                     --------->AtLEC2   <---------ICU4                                         ------                     ------>MYB46(1)   <---------ATHB12                             --------->YAB1                     --------->ANAC58  --------->ICU4                --------->YAB1----------->GT1                     ------>MYB83     <---------TOE2(3)             <---------ATHB12--------->TOE2(3)       <-----------GT1 --------->YAB1--------->YAB1        <-----------GT1         <---------ZAT6  -- -------ANAC46  <-----------GT1<---------TOE2(3)         <----------DOF2  ---------->DOF2  <---------At5g28300   tagtgtatttaagcatttttaccaagcacaatttacgattaatgatgatctttagtcttctttaccatcaataatccaaagcctaatgttaattacagtg  13323700                              <------MYB46(1)                              <---------MYB46(3)                              <---------DEAR3(2)                              <------MYB83                            <--------P                          =======================RAV                          <-----------RAV1(1)                        <------MYB46(1)                        <---------ANAC46                        <------MYB83                  <---------DEAR3(2)       <------MYB83     <---------ANAC58              <------MYB46(1)       <------MYB46(1)  <---------ANAC58              ----------->GT1      --------->MYB59  <---------AtMYB61              <------MYB83      <---------AtMYB61--------->MYB46(2)             <---------MYB46(3)    <---------MYB52(1) --------->MYB111(2)   --------->GLK1(2)     --------->ARR14(2) ----->HVH21 <---------ANAC46<---------AtMYB61       <---------DEAR3(1)--------->LBD16        <------ ------->MYB52(1)  <---------TOE2(3) ----------->RAV1(2)           <---------ARR14(2)   <-----------HVH21   acaacggtttggtttccgtttaagtttggtgttggttccccctgaagaatttgggtcggtttatttctggttccgaatcaaattggttctcgtcaaatca  13323800                    --------->GLK1(2)                   <---------GLK1(2)                  <------ZmHOX2a(1)              --------->TOE2(2)                                     --------->ATHB12              --------->TOE1(2)         ------>ZmHOX2a(1)     <------------CBF  <-----------GT1------        --------->YAB1                XXXXXXXXXXXXXXXXXXXXX>MIR4221<---------YAB1--------->SPL7------       <---------YAB1          <---------ANAC58        --------->YAB1        <---------------AtSPL3 ---ATHB12  --------->GLK1(2)  <---------ANAC58     ------>ZmHOX2a(1)<------------CBF          <-----   acatgttttatgataatctaggattctagggtttcttggctcctctgttaaatcctctcatgaaaattgaagattggagtttgtacgacttggccaaaat  13323900                                                               <------ZmHOX2a(1)                                     ----------->RAV1(2)     <---------TOE2(3)                            --------->At4g35610       --------->ANAC58                --------->LBD16  --------->ATHB12        <---------GLK1(2)           --------->ANAC58               <---------HSFB2a(2) <---------YAB1          --------->At4g35610        ---------->DOF2           --------->DOF5.7(2) --------->ICU4          <---------At4g35610        <------ZmHOX2a(1)         --------->At5g28300 --->GLK1(2)             <---------ZAT2           --------->LBD16            ----------->GT1 --->ARR11(3)        <-----------HVH21           <---------LBD16         ----------->HVH21    <------ ----ARR11(3)  <---------WRKY12    --------->YAB1--------->HSFB2a(2) --------->ZAT2 <---------LBD16   cttatgattaaaacagttcaacgagtcagcttctgaatcatctggtctcatccaggaagcactaaggaacgagctacgacggtaactcccgaacaaatca  13324000                                                              <---------GLK1(2)           ------>ZmHOX2a(1)                                                            <---------TOE2(3)          ---------->ID1                       <---------YAB1                    <----------DOF2     --------->YAB1                       ----------->TBP          --------------->AtSPL8      <---------ATHB12 ---ATHB12    <---------YAB1      <----------DOF2   ------->TEIL        ------------>CBF  <----------DOF2   acttgtataagtttttgtgataactataaatgtaagcttttgttttgttttatgaacttctttaggttctctaatccaatcgtagacttgtcctttggcc  13324100                                                                                              -------                                                                                              -------                                                                                              <------                                                                                             <-------                                                              --------->ATHB12               <-------                                                         <---------ANAC46                    --------                                                        <---------LBD16                      <-------                                                  <---------WRKY45                       --------->KAN4(2)                                                  <---------WRKY38(1)               <---------ANAC46                                       ------->TEIL   <----------DOF2              ---------->ID1 --- --------->ZAT2             <---------MYB46(3)   <<<<<<<<<<WRKY11            <---------ARR14(2)------ --------->At4g35610     <------------CBF        <<<<<<<<<<WRKY6             --------->ICU4 <--------   actagctgaaagtttgggaatcgagagcattggttcacatggaccgtattagtcaactttcggatgatttgctcttgcaaatattgtcgtttattccggg  13324200  --------->ARR11(3)                                                                   <---------ALFIN1  <---------ARR11(3)                                                        --------->YAB1 -->LBD16                                                               <---------TOE1(1) -->HSFB2a(2)                                                       <---------ANAC58  --------->ZAT14 ---HSFB2a(2)                                                       <---------ANAC58  <---------ZAT14 --HSFB2a(2)                                                  <---------ARR14(2)     --------->AtMYB61 --LBD16                                                      --------->ARR14(2)   -------->P    ---- ->HSFB2a(2)                                               --------->HSFB2a(2)  <---------At4g35610 --ANAC46                         --------->ALFIN1        <---------LBD16  <---------YAB1       ----- ------->DOF2                ---------->DOF2<----------DOF2<---------HSFB2a(2)  --------->At4g35610<- --->LBD16          <----------DOF2 <------NtERF2     --------->MYB52(2)<---------TOE2(1)       <---- -LBD16       <---------ALFIN1 --------->DAG2       <---------MYB52(1) --------->SPL7<---------ALFIN1   aaaagatgttgtggccacaagtcttttgtccaaaaggtggcagtctctttggatgttagtttcggaacttgagtacgatgatagctaccacactggtgat  13324300   <---------ARR11(3)                                                    ------->TEIL               -   --------->ARR11(3)                                                   <---------CCA1(2)    -------- ----->YAB1                  <----------DOF2    <---------At4g35610 ----------->RAV1(2)     --------- ---->ICU4                <---------ARR11(3)    ----------->RAV1(2) <---------At4g35610     --------- --------YAB1             --------->ARR11(3)   ------->TEIL         --------->At4g35610    <---------LBD16 -----YAB1     <---------MYB52(1)            <---------ZAT18       ------->TEIL    ----------->HVH21<   tataagagcttctctcagtttgtttacaggtctttgctatcaaacaatgcacctgttataaaacatttgcatctgaatcttggccctgactgtcccgcta  13324400                                              <---------At4g35610                                              --------->At4g35610                                              --------->ZAT2                                              <---------ZAT2                                             ------>NtERF2                                            <-----------RAV1(2)                                           --------->ATERF1(1)                                          ------>NtERF2                                         --------->ANAC46                                        --------->At4g35610                                       <---------ATERF1(1)                                      <---------DEAR3(1)                                     --------->ATERF1(1)                         <---------ANAC58                 <------MYB46(1)     ----------->RAV1(2)     <---------------AtSPL3                 <------MYB83       <-----------HVH21        --------------->AtSPL3 -------->ARR11(3)                  <---------ATERF1(1)      --------------->AtSPL8  <----------DOF2 ->LBD16        <---------AtMYB61   ------>NtERF2        <---------YAB1          <---------ANAC46 >ANAC58       <---------WOX13(1)   <---------SPL7     <---------AHL20(2)        <---------ANAC58  -- >ANAC58     --------->ATHB12      --------->DEAR3(1)  --------->AHL20(2)       <-------TEIL     ---- ---------ARR11(3)              --------->ANAC46      --------->AHL20(2)    <---------ATHB12    <----   tagatattggactatggattggttttgctcttactcgccgtctgcgccagctgaaaattaatattcgtacttcttccaacgatgcgtctttcagtttgcc  13324500                                                                                           ----------                                                                                     <---------CCA1(2)         <-----------GT1                                                           ==================   <---------ANAC46         --------->ARR11(3)                                     --------->O2     - ------->REM1(2)            <---------ARR11(3)               --------->KAN4(2)     --------->TGA1a  < -->NtERF2           --------->TOE2(3)          <---------ANAC58                   ================== -----ANAC46       <-------TEIL                 <---------ANAC58          <---------MYB52(1)   ------   gagtagcctatatacctctgatacattagagaccttgagactcatcaatttcgttctattggatgttccttcttcagtttgtctcccgtctctcaaagtt  13324600  Previous    Next  AGI:  At4g26340.1    Description:  F-box family protein. Identical to F-box/FBD/LRR-repeat protein At4g26340 [Arabidopsis Thaliana] (GB:Q8H1R7;GB:Q9STQ1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT4G26350.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 13324139    to: 13325599    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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