Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                <------ZmHOX2a(1)                                   <                                               ----------->GT1                              ------>ZmHOX2a(1)                                          <---------REM1(1)                               <---------ANAC58                                        --------->At4g35610               <---------ZAT18 -----------          ----------->GT1               <---------At4g35610         -------->P            <---------ANAC58  --------->YAB1  --------->YAB1     <-------TEIL             --------->DAG2       --------->AHL20(2) ------->WOX13(1)<---------ATHB12   <-----------HVH21        ---------->DOF2--------->At4g35610  <---   tccatcaaaattttgttaaatcatactcatccaaaaacgttcagatgtaaggagaaaacttcaaaaagctaacctgttcgctcaattacatttcctgccc  13315700                                                                                  <--------ATHB1                                                                             <-------TEIL                                                               <---------ZAT18    --------->YAB1                                                               --------->ZAT18   <---------ATHB51                  --------->ANAC58                           <-----------HVH21   <---------ATHB12           <---------MYB52(2)                       <----------DOF2       ----------->GT1           --------->MYB46(3)                      <---------ICU4        <---------------AtSPL8 -------->At4g35610                               <---------YAB1         --------->DAG2 ---------At4g35610  <---------GLK1(1)         <------ZmHOX2a(2)       ---------->DOF2 >RAV1(2)<-----------GT1--------->YAB1        <---------ARR11(3) <---------At4g35610 ------MYB52(1)   --------->ANAC58            --------->ARR11(3) --------->At4g35610      --------->KAN4(2)   ttagctgaaattaacaaaccaagaaatcagagtgcgaacatggacacagatcatctttactcgtgtgagctcaaaaaggttcaataatagtttattcgct  13315800                                                                     <---------ANAC58                                                                     <---------ANAC46                                                                     <---------ANAC58                                                                     <---------DEAR3(1)                                                                    <------NtERF2                                                                    ------>NtERF2                                                                   ------>NtERF2                                                        --------->TOE1(3)                                                        --------->TOE2(3)     --------->ZAT14                                        ----------->RAV1(2)       <---------DEAR3(1)                                    <---------DAG2    <---------TOE1(3)       <---------At4g35610                            ----------->GT1          <---------DOF5.7(2)      --------->At4g35610                --------->TOE2(3)   <----------DOF2--------->DOF5.7(2)<-------GAMYB              <---                <----------DOF2  <-----------GT1 <---------ANAC46--------->LBD16       --------->LBD16          --------->ANAC58<---------ZAT14   <---------GLK1(2)    <---------LBD16      --------->ANAC46          --------->ANAC58--------->ZAT14--------->TOE2(3)      --------->DEAR3(1)   <---------LBD16   agtcaaatgagtaagaaactttaatctctgcagttaaactttacctgaatcgcgttaaccttaacaccgcggcgttgcagagcagaccacggagaatgaa  13315900                                  <---------TOE1(1)                                  <---------TOE2(1)                               <---------SPL7                              <---------ANAC58                              <---------ANAC46                              <---------ANAC58                             <------NtERF2                            ------>NtERF2                            <---------ORA47(2)                            <------------------SPL14                            <---------ATERF1(1)                            <---------RAP2.6(1)                            <---------RAP2.3(1)                            <---------ERF1                           <---------RAP2.3(2)                           <---------RAP2.3(3)                           --------->ATERF1(2)                           --------->DEAR3(1)                           <---------DEAR3(1)                        --------->DEAR3(1)                        --------->ATERF1(2)                        <---------ATERF1(2)                       --------->DEAR3(2)                --------->At4g35610             <------NtERF2--------->ATERF1(1)             --------->At4g35610 --------->SPL7          <---------LBD16 <---------ABI4(1)       <---------ARR14(2)<---------ATERF1(1)                                                     ----    <---------ANAC58  --------->MYB52(1)                                                        <----    <---------ANAC58 <---------ALFIN1   <---------MYB46(3)    ---------->DOF2                 -------   <------NtERF2<---------At4g35610    <--------P         --------->At4g35610          <---------MYB52(1) <---------DEAR3(1) --------->MYB46(3)<-------GAMYB  ------->GAMYB   ---------->DOF2 <---------MYB46(3) ------At4g35610<------NtERF2--------->ATERF1(1)    --------->MYB46(3)           ------>ZmHOX2a(1) <-   gcggaggcgtttctcggcagcatccaccggcggcgtacggggttgatgacaacaacgacctgctcaaagaataaagagacctcctagtcgttactgcccc  13316000                                                                       <---------At4g35610                                                                       --------->At4g35610                                                              ------>NtERF2                                            --------->GLK1(2) <---------At4g35610   <---------O2                            <---------GLK1(2)--------->ATERF1(1) ----->LBD16                             <---------TOE2(3) --------->ZAT14 -------RAV1(2)               <------ZmHOX2a(2)            <---------ZAT18 ---->RAV1(1)      ==================HOX2a_HOX2a       <-----------RAV1(1)                  --------- -----ZmHOX2a(1)   <------ZmHOX2a(1)     ----------->ARR10 <---------At4g35610  <-----------GT1   aggagaagtggcattagagaaggagaagagagatcgagagattgagattctcttgaaatggtgcagccctctcatctccgtttaacccttgcaatcggaa  13316100                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                          <------ZmHOX2a(1)                                                                                 <---------bZIP60(1)                                                                                 <---------bZIP60(2)                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                                 --------->bZIP60(1)                                                                                 --------->O2                                                                                 <---------TGA1a                                                                                 --------->TGA2(1)                                                                                 ====================                                                                                 <---------O2------>NtERF2                                                                  <---------ANAC46      --------->ANAC58                                                                 <------NtERF2----------->HVH21                                                                ------>NtERF2 ----------->TGA1<------NtERF2                                      ----------->GT1          <---------ANAC46<---------TGA2(2)                                    <------------CBF           --------->DEAR3(1)--------->TGA1a                          ------>ZmHOX2a(2)                 --------->ANAC46<---------At4g35610  <---           --------->ANAC58<---------HSFB2a(2)            <---------ALFIN1  --------->At4g35610 <----  <---------GLK1(2)      *TSS  ---------->DOF2  ----------->RAV1(1) <---------MYB52(1)  --------->ANAC58 >YAB1     --------->ANAC58--------->HSFB2a(2) <----------ID1  <---------DEAR3(1)<---------TGA2(1)   aactgattctcgctcgctactccattgatcgagaaaagaattgaaaaaaacaacaaaacaacacggcgtcgtttgctatgctgacgtcgcaaggacgccg  13316200                          <---------MYB52(1)                        <---------ANAC46                       <------NtERF2                       --------->RAP2.3(1)                       --------->DEAR4(2)                       --------->ATERF1(1)                      ------>NtERF2                      --------->ABI4(2)                      <---------ATERF1(1)                      <---------RAP2.3(1)                     <---------DEAR3(1)                     --------->DEAR3(1)                                                           <--                    --------->ATERF1(1)            --------->MYB52(1)                            ----                    --------->RAP2.3(1)         <---------At4g35610                              <---                   <---------RRTF1(1)        --------->LBD16                                     ----                   <---------RAP2.3(1)     <---------LBD16                                      <---- >ANAC58          <---------RAP2.3(3)      ------>ZmHOX2a(2)                                    ----- >ANAC58          <---------RAP2.3(2)    --------->ARR14(2)                                    ------ -DEAR3(1)   <---------ICU4              <---------ARR14(2)                         --------->ANAC58 ===MYC_MYB  <---------MYB46(3)        <---------YAB1                --------->At4g35610       <----- ------MYB52(1)  <---------At5g28300 <---------At4g35610   --------->MYB52(2)       --------->ANAC58 ---GAMYB --------->MYB52(1)      <---------At4g35610     <-------TEIL   ---------->DOF2    <--------   ttaagacagaactaatggttacggcgccgttttcgatgctgatgatccggagctaatgggttcgtttcacgagcggaaagacggacaaggccttctaatt  13316300      <---------------AGL15                                        <-----------HVH21 -------YAB1                                                      ------->GAMYB ----->AHL20(1)                                                  <------------AtMYB77 ------AHL20(2)                                                 --------->At4g35610 ----->AHL20(2)                                             --------->ANAC46 -----ICU4                                                  --------->ANAC58 ---->YAB1                                                  --------->ANAC58 --->ICU4   --------->DAG2                                ---------->DOF2 ----YAB1  ---------->DOF2        <-----------GT1     <---------At4g35610              --------->AHL20(2) -YAB1--------------->AGL15  ----------->GT1          --------->At4g35610         --------->AHL20(2)   ataatgggccttaaaaagtagcccattaaacttgttatactttcttcaaatacttgagatgaaagcaactgtcatgaacaaaaaaaaaattcaatacatt  13316400                                        <---------DAG2                                        <---------------AGL15                                  <-----------GT1                                  --------->ZAT6                                --------->YAB1                              <---------AHL20(2)                              --------->AHL20(2)                             --------->YAB1                            <---------YAB1                           <---------AHL20(2)                    ---------->DOF2                           --------->AHL20(2)              <---------ICU4                  --------->PCF5                           --------->AHL20(1)              --------->ATHB12         <---------ANAC58                          --------->AHL20(2)              <---------YAB1            <---------ANAC46                        <---------GLK1(2)           --------->ARR11(3)              <---------ANAC58                 <---------AHL20(2)     <----------DOF2   --------->ICU4        <---------ANAC58          --------->GLK1(2)<---------AHL20(1)       <---------ARR11(3)          <---------ANAC58<----   cttgaagttcaaattctatttatacagattatattaatactacttttcttagaagatgtcatgattgtaaagcttacaagttgtttgcttgttgtccccc  13316500                                                                                                  <--                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                               ------                                                   <-----------GT1                             <-----                                               <---------AHL20(2)                             <------                                              --------->AHL20(2)                           <---------MYB52(2)                       <---------ARR11(3)  <---------AHL20(2)                      --------->MYB52(1)                       --------->ARR11(3) <---------YAB1------>MYB46(1)        <---------------AGL15                     <---------TOE2(3)  <---------ICU4  ------>MYB83           ======================           <----------DOF2          --------->AHL20(2)<---------MYB111(2)      --------------->AGL15      --------->YAB1 <---------YAB1 <---------AHL20(2)<---------MYB46(2)<---------YAB1------->GAMYB -----ALFIN1   <---------TOE2(3)----------->GT1--------->AHL20(2)   --------->AHL20(2)--------->ANAC46   tcccactataatgctttgagattaagatttcaactagtttaatttttatttaatcaccaaactattgaaataatatgattactactaacagcaactaatg  13316600  Previous    Next  AGI:  At4g26310.1    Description:  elongation factor P (EF-P) family protein. similar to elongation factor P (EF-P) family protein [Arabidopsis thaliana] (TAIR:AT3G08740.1); similar to putative translation elongation factor P [Oryza sativa (japonica cultivar-group)] (GB:AAP21425.1); contains InterPro domain Translation elongation factor P/YeiP, central; (InterPro:IPR001059); contains InterPro domain Translation protein SH3-like (InterPro:IPR008991); contains InterPro domain Translation elongation factor, KOW-like (InterPro:IPR013185); contains InterPro domain Translation elongation factor P/YeiP, conserved site (InterPro:IPR013852); contains InterPro domain Translation protein Range:  from: 13313779    to: 13316125    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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