Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->HSFC1(1)                                                                            --------->HSFB2a(2)                                                                            <---------HSFC1(1)                                                                      --------->ARR11(3)                                                                      <---------ARR11(3)                                                <------MYB46(1)      --------->REM1(1)                                                <------MYB83        <-------TEIL                                               --------->MYB59    --------->At5g28300                                          <-----------RAV1(2)   --------------->AtSPL8 ------->GAMYB                       ----------->GT1    <---------LBD16       --------------->AtSPL3--------->MYB46(3)              ---------->DOF2       <------ZmHOX2a(1)       --------->CCA1(2)  <<<<<<<ZML2 ---DOF2 --------->AHL20(2)     <-------TEIL <------ZmHOX2a(1) <-------TEIL <---------HSFB2a(2)     -   atcaaatcagattaaaaaaagagagaggtaaacatacaggaagaccaggaaggtaatcggagagatgcggtacatcttctagaacataaccacaagagcc  13304000                                                                                                 ----                                          --------->HSFB2a(1)                                --------                                          --------->ANAC58                                   --------                                       ------->GAMYB                                     <---------YAB1                                      --------->MYB46(3)                                 <---------AHL20(2)                                    --------->MYB52(1)                                  <---------AHL20(1)                            <---------ZAT14   --------->ANAC58                          --------->AHL20(1)            <---------MYB52(1)   --------->YAB1                       --------->LBD16   <---------AHL20(2)      ------>ZmHOX2a(2)     --------->ZAT14   --------->ANAC58       <---------LBD16 --------->AHL20(2)    --------->ARR11(3)    --------->ANAC46<---------HSFB2a(1)       <-----------RAV1(2) --------->AHL20(2)    <---------ARR11(3)  <---------ALFIN1  --------->ANAC58          <---------LBD16  --------->YAB1    <-----------ARR10  <---------REM1(2) ------->TEIL             <-----------HVH21 <---------YAB1 -------->YAB1       --------->ANAC46 <---------MYB52(2)<------ZmHOX2a(1)  ---------->DOF2--------->YAB1   attgatgatcttcggtttgctactctccacagtactcataacgaacgctcgaaacagaggaacaacaatttcaggggaaaagtcttataatataataaaa  13304100                                                                    --------->DAG2                                    <---------WRKY38(1)       <------ZmHOX2a(1)                  ----                                    <---------WRKY45 --------->ANAC58                            ----    <---------AHL20(2)              <---------WRKY12 --------->ANAC58         ---------->DOF2   <---- ----->MYB52(1)                    --------->WRKY18(1) ---------->DOF2    ---------->DOF2  <---------ARR14(2) ->YAB1                 <----------DOF2        --------->AHL20(2) ---------->DOF2          --------->ARR14(2) ->AHL20(2) --------->HSFB2a(2)   <-----------HVH21  --------->ANAC46----------->GT1  ------->TEIL   aacgatttttttttctggtatagagacttttgaactggtcaactacaaattgaatacgaaagcaggaagaaaggtaaaaagaaagatgaatcaaatccgt  13304200                                                        <---------DEAR3(2)        <---------ZAT6                                                        ----------->GT1        <--------P             ------>NtERF2  <------ZmHOX2a(1)           <------MYB83       <-----------RAV1(2) ----->WRKY38(1)      <---------YAB1                    <------MYB46(1) --------->ANAC58 ----->WRKY12<---------ATERF1(1)----------->GT1   --------->ZAT14       --------->ANAC58 -----MYB52(1)       --------->AHL20(2)    <-----------GT1            ---------->DOF2             <--   tgatcaaaaacaaggcgacccatttttataggagtagagaaattttgaccattgtagtcggtaaacaaattacaaagccaggtagagatagagagagaga  13304300                            <---------ARR14(2)                            --------->ARR14(2)           --------->ARR11(3)                                               ------>NtERF2           <---------ARR11(3)      <---------MYB46(3)   *TSS          --------->MYB52(1)           --       ---------->DOF2    --------->LBD16         <----------DOF2 --------->ZAT6          <---------ANAC58 ----ZmHOX2a(1)         <---------LBD16   <-----------HVH21    ----------->HVH21          <---------ANAC58   ggaaaccattaaaggtcttagctatgtgcggaaatggtggttttggtcactgctttgtagattatttgacagtaacgacgactagtacaagtacttgcag  13304400                    <------------CBF                --------->HSFC1(1)                --------->HSFB2a(2)                <---------HSFB2a(2)                                                   <------MYB83        <---------RVE1(1)                               <----------DOF2            <---------ANAC58    <------ZmHOX2a(2)                                  --------------->AGL15  <---------MYB52(1) <<<<   <---------ARR11(3)                  <<<<<<<<<MYB2   <---------DAG2       <-----------RAV1(1) -----   --------->ARR11(3)            --------->ATHB12<------------------------ANAC81   <---------ANAC58 -------->DOF2  <---------HSFC1(1)<------------CBF  <-----------GT1  <-----------GT1  <------MYB46(1)   agaaagatcgatatttttctagaattgatatttgtttattggttttctattttgttaccttttattgattttttccaactgttgggcttggttatcaagt  13304500          --------->AtLEC2                         --------->LBD16     --------->ANAC58                           <------ZmHOX2a(2)     --------->ANAC58    ----------->HVH21     --------->ARR14(2)     --------->ANAC46   --------->SPL7         <---------ARR14(2)                          --------->ANAC55(2)  --------->WRKY18(1)   --------->DEAR3(2)--------->MYB52(1)                           <----------DOF2 <-----------HVH21    <-----------HVH21   <-----------GT1<---------YAB1               --------->TOE2(3) <<<<<WRKY18          <---------SPL7------->GAMYB------>ZmHOX2a(2)                  ------->TEIL<---- ---->WRKY18(1)   <-----------GT1--------->MYB52(1)----------->GT1  <---------GLK1(2) --------->TOE1(3)   caaggtcaagccatgcattaatacggtccgaccgataaccgaaataaccgatccggtttattatttctcagaattttgaaaccatgaacctttacatgat  13304600                <---------YAB1             --------->ICU4                                     <---------ICU4             <---------YAB1                                     --------->ANAC46     <-------TEIL                                               --------->YAB1                  -----    --------->CCA1(2)                                 ----------->RAV1(1)                       <----   <---------ARR14(2)                              --------->ANAC58                           -------   --------->ARR14(2)            ---------->DOF2   --------->ANAC46                        --------->AtLEC2  <------ZmHOX2a(1) <-----------GT1                --------->ANAC58                   <-----------GT1 -----YAB1 <-------TEIL     ------->TEIL    XXXXXXXXXXXXXXXXXXXX>MIR415       <---------GLK1(2) -----   caaaggatacaggtacttattgttacaatgcatttcaaaggaaaacaaaacacaaacaacacataaacatcactaattcagaattttaaaaccatgcacc  13304700                           <-----------GT1                           --------->YAB1                          <---------YAB1                        -------->HAHB4                        --------->YAB1                        -------->ATHB1                        <--------HAHB4                        <---------ICU4                   <---------KAN4(1)                        --------->ATHB51                 --------->KAN4(1)                       --------->ICU4                   <---------KAN4(2)                       <---------ATHB51             --------->TOE1(1)                       <---------YAB1              <---------LBD16                 <---------ICU4                     <---------ICU4               --------->TOE2(2)              <---------ARR11(3)                     --------->YAB1               --------->TOE1(2)              --------->ARR11(3)                    --------->AHL20(2)         ------>MYB46(1)                  --------->YAB1 ---->TOE2(3)       <---------AHL20(2)       --------->AtMYB61                 <---------YAB1 -----DAG2     <---------ANAC55(2)           <---------MYB59  <----------DOF2  --------->ICU4 >TEIL     <-----------HVH21               >>>>>>>>>>MYB80--------->YAB1   ------>ZmHOX2a(1) ---->TOE1(3)  --------->ANAC55(2) ------->TEIL------>MYB83--------->GLK1(2) --------->YAB1   <------   ttaacatcagaagggtcacttattaattattacaatgcattttcaaaccaaacctcggaataatctttgagtttctccttcatgatcatgtcgattttgc  13304800                                                  --------->ARR14(2)                                                --------->LBD16                                         <---------------AGL15                                         --------------->AGL15                                        ----------------->AGL2                                        <-----------------AGL1                                        ----------------->AGL1                                        ----------------->AG                                        <-----------------AG        --------->LBD16             --------->MYB46(3)       <---------HSFB2a(2)          <---------MYB52(2)       --------->HSFB2a(2)         ------>MYB46(1)<---------ARR14(2)                    --------->LBD16      <---------LBD16            --------->MYB46(3)       <---------ANAC58            <---------LBD16    <---------ARR14(2)      <-----------HVH21 <---------LBD16                      <----------DOF2    --------->ARR14(2)     --------->ANAC46<----------DOF2<---------ANAC58    <---------WOX13(1) -----GT1      <---------At4g35610 ------>MYB83<---------ANAC46             --------->ATHB12       --   tacccatttccggagttagatgattcttccagtcaccaactatccctttgcggaaatggttcttgtactctatgccattgattgactttccggtcttgtt  13304900  Previous    Next  AGI:  At4g26270.1    Description:  phosphofructokinase family protein. similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G32840.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT5G56630.1); similar to phosphofructokinase family protein [Arabidopsis thaliana] (TAIR:AT4G29220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43755.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65420.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74837.1); contains InterPro domain Phosphofructokinase-core; (InterPro:IPR015913); contains InterPro domain Phosphofructokinase; (InterPro:IPR000023); co Range:  from: 13300804    to: 13304356    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g26280.1    Description:  sulfotransferase family protein. similar to sulfotransferase family protein [Arabidopsis thaliana] (TAIR:AT3G45070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22182.1); contains InterPro domain Sulphotransferase; (InterPro:IPR000863) Range:  from: 13304730    to: 13305731    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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