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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
At4g35610
--------->
ARR14(2)
<---------
REM1(2)
--------->
At4g35610
<---------
ZAT14
--------->
At4g35610
--------->
ZAT14
<---------
HSFB2a(1)
--------->
MYB46(3)
---------->
DOF2
--------->
HSFB2a(1)
<---------
ARR14(2)
--------->
ANAC46
<---------
ANAC46
---------->
DOF2
--------->
ARR14(2)
--------->
ANAC46
-----
HSFB2a(2)
---------->
DOF2
<---------
ARR14(2)
--------->
ANAC46
--
---->
HSFB2a(2)
========================
HOX2a_HOX2a
--------->
ANAC58
-------
-->
At4g35610
<------
ZmHOX2a(1)
<------
ZmHOX2a(2)
--------->
ANAC58
--------->
CCA1(2)
<------
ggaaaatggagtagaagaggaaagctccaaagcagatcagaagaaccacaaacacgct
ctacacaaaagataaacacaaacttacttaagaaacagaact
13288600
---------------
--------->
SPL7
------->
TEIL
------>
MYB83
--------->
MYB52(1)
------>
MYB46(1)
<---------
MYB59
--------->
MYB52(1)
--------->
CCA1(2)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
ANAC46
------>
ZmHOX2a(1)
-----
<------
ZmHOX2a(2)
<---------
At4g35610
=====
--------->
ARR11(3)
--------->
At4g35610
--------->
HSFB2a(1)
---->
ZmHOX2a(1)
<---------
ARR11(3)
<---------
At4g35610
<---------
ARR14(2)
-->
GLK1(1)
--------------------->
WRI1
--------->
At4g35610
--------->
ARR14(2)
---
---
GLK1(1)
--------->
AHL20(2)
--------->
KAN4(2)
<----------
DOF2
--------->
TOE2(3)
------
cctcaaaattttgcagaaattgaatattgttcttagatcatac
cctccattgaagactttgctgagcatgagcttcctcaagataccgaacgtactcctc
13288700
<
--------->
ARR14(2)
<---
----------->
GT1
--------->
GLK1(2)
<---
>
AtSPL3
----------->
RAV1(1)
<---------
ANAC58
----
------>
RAV1(2)
<---------
ANAC46
--------->
LBD16
<---
======================
RAV
<---------
ANAC58
--------->
HSFB2a(2)
<---
--->
ZmHOX2a(1)
--------->
AHL20(2)
<----------
DOF2
<---------
HSFB2a(2)
<---
>
ZmHOX2a(1)
--------->
YAB1
------->
TEIL
<---------
ARR14(2)
<------
ZmHOX2a(1)
<----------
ctgct
ctgtaaaacgacagtgatagcaataaactattacgaacttgcttttacaaatctgccaaaaattccagaggatgagagaaacaaaataaac
cttg
13288800
---------
ARR11(1)
------
ANAC55(1)
------
ANAC58
--------->
ARR14(2)
----->
ANAC55(2)
--------->
O2
--------->
YAB1
------
ANAC58
<---------
ARR14(2)
<---------
YAB1
------>
NtERF2
------
ANAC55(2)
<---------
O2
------->
TEIL
<-----------
HVH21
--------->
LBD16
------
ANAC46
--------->
GLK1(2)
<------
ZmHOX2a(1)
<-----------
TGA1
--------->
ANAC46
-
GT1
<------
NtERF2
<------
ZmHOX2a(1)
--------->
ANAC46
<---------
LBD16
--
cgtatcaataggccgagaatcgacgtcttcagaagtaggaaggacgaacttatcatcatcttcgtcacgacgagttctccgccattttctcgctaacttc
13288900
<------
ZmHOX2a(1)
*
TSS
--------->
MYB59
---------->
DOF2
--------->
ICU4
--------->
YAB1
------->
GAMYB
--
------->
ATHB12
----------->
GT1
<---------
ATHB12
--------->
ANAC46
--
ttcat
ttgatttttcttcagattgcagaagtagaagatggagaaattaggaaaacttcaatgagcatcatcgtttcttca
acgaaagtgtctccagccaa
13289000
<------
MYB46(1)
<------
MYB83
<---------
ANAC46
<---------
ANAC58
<-------
<---------
ANAC58
---------
<---------
At4g35610
<---------
MYB52(1)
<---------
At4g35610
---------->
DOF2
--------->
ATHB12
--------->
LBD16
<--------
<----------
DOF2
<---------
WOX13(1)
------>
NtERF2
----------->
GT1
------->
ANAC58
<------------
CBF
<---------
LBD16
--------->
ALFIN1
------->
ANAC58
--------->
ATHB12
<---------
CCA1(2)
--------->
At4g35610
aacgcctttaagctacggcctattaagaagcccagcccatagtttagcaagattgattcggtttcttatctccggcttggtttgctgtgttgaaataaat
13289100
--------->
ATHB12
<---------
ATHB12
--------->
ALFIN1
<---------
AtMYB61
--------->
MYB52(1)
<---------
TGA1a
<----------
DOF2
<---------
ANAC55(2)
=============================================
bZIP_DOF
--------->
ANAC58
=============
MYC_MYB
--------------->
AGL15
--------->
ANAC55(2)
------->
GAMYB
<---------
DAG2
--------->
ANAC46
<---------
AHL20(2)
<---------------
AGL15
--------->
ANAC58
--------->
AHL20(2)
<---------
MYB59
<-----------------
AGL3
--------->
ANAC55(1)
--------->
AHL20(2)
<---------
PCF2
===================================================
--
AHL20(2)
--------->
ANAC46
<-----------------
AGL2
<---------
ZAT18
>
AHL20(2)
--------->
ANAC58
--------->
ZAT6
<---------
ZAT14
-
AHL20(2)
--------->
ANAC58
<<<<<<<
ZML2
<-----------
GT1
--------->
ZAT18
<---
gggctatttaattcaacgcaagtgggcctaactagaacaatttagttacactactttttttggtcgcaaaactacaagagtacacgtaacgaatgattta
13289200
--------->
TOE2(3)
<---------------
AGL15
--------->
YAB1
<-----------------
AG
<---------
At4g35610
<-----------------
AGL1
--------->
At4g35610
----------->
GT1
<---------
ANAC58
--------->
DAG2
<---------
ANAC58
<---
<---------
CCA1(1)
--------->
ANAC46
<---------
ANAC55(2)
<---------
RVE1(1)
<---------
ARR11(3)
<---------
AHL20(2)
-----
--------->
ARR11(3)
--------->
ARR14(2)
------->
TEIL
--------->
ANAC55(2)
<---------
ARR11(3)
<---------
ARR14(2)
--------->
ZAT14
<---------
MYB52(1)
<
<---------
TOE2(3)
=============================================================================
========================================
MADS_MADS
<---------
ATHB12
--------->
AHL20(2)
-------
------
TOE2(3)
---------->
DOF2
----------->
GT1
------->
TEIL
<---------
ZAT14
--------->
LBD16
<-----
agggattagggatatttcagaaaggtaacacatatggcaatatatgccatatgaatcaaacattcaatgcaccgatttaatccgtgagcaaacataaata
13289300
--------------->
AGL15
<---------------
AGL15
--------->
LBD16
<---------
YAB1
<-----------
GT1
<-----------
GT1
<---------
AHL20(2)
--------->
YAB1
------
YAB1
<-----------------
AG
------>
ZmHOX2a(1)
--------->
ANAC46
<--
---->
AHL20(1)
----------------->
AGL3
--------->
ARR14(2)
<---------
LBD16
-----
---------
YAB1
----------------->
AGL1
<---------
ARR14(2)
<-------
MYC3
<---------
YAB1
================================
MADS_MADS
<---------
CCA1(2)
--------->
ARR14(2)
<---------
YAB1
-->
ICU4
----------------->
AG
<-----------
GT1
--------->
AHL20(2)
--------->
AHL20(2)
----
ICU4
------>
ZmHOX2a(1)
<-------
TEIL
<---------
ARR11(3)
------->
MYC3
--------->
YAB1
ttatgaattatcctcgtttccatattagttaagcattttagattcatttttctatatcctctctgatttaatccatatgcgcaaatatttatgatgaatt
13289400
--------->
ARR11(3)
<---------
ARR11(3)
<-------
TEIL
--------->
AHL20(2)
-
--------------->
AGL15
<----------
DOF2
--------->
WOX13(1)
--------->
DOF5.7(2)
<---------
YAB1
------>
ZmHOX2a(1)
------------>
CBF
--------->
TOE1(3)
-------
YAB1
------------>
CBF
---------->
ID1
<---------
CCA1(2)
--------->
TOE2(3)
---->
YAB1
<-----------
GT1
<----------
DOF2
<---------
AHL20(2)
--------->
TOE2(3)
--
atacttagttccatatgtattacaatttttagattcattcttctttatccttttcgatttaaatcttcgtagtcaattactcccttaaaaaacgttatca
13289500
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AGI:
At4g26240.1
Description:
similar to unnamed protein product [Vitis vinifera] (GB:CAO65405.1); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196)
Range:
from: 13286783
to: 13288980
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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