Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <--------P                       <-------GAMYB                      ----------->GT1                      <------NtERF2                     --------->LBD16                     <---------MYB46(3)                    <---------ANAC58        <---------MYB52(1)                                         ------>ZmHOX2a(1)  <---------GLK1(1) <---------ANAC46                  --------->TOE2(2)  --------->GLK1(1) <---------ANAC58        <--------P--------->TOE1(2) -ZmHOX2a(1)       <---------LBD16        ----------->GT1 --------->ZAT18                           < --------AtSPL8 <---------WOX13(1)----------->GT1--------->AHL20(2)----------->GT1      --------->ARR11(3)   acagaaatcggtttgctaattggcgggttaatagttttgtaaaatggtagattaaacatgcgctctatcctgtaacatttctgagcttgagaacttgtag  13257400                              <---------ANAC58                              <---------ANAC58                             --------->HSFC1(2)                             --------->At4g35610                             <---------HSFC1(2)                              <---------YAB1                         --------->MYB52(2)                                 --------->TOE2(3)                       <---------MYB52(1)                   <---------At4g35610      <------ZmHOX2a(2)                      --------->TOE2(3)                     --------->At4g35610--------->YAB1                  <---------ARR14(2)             --------------->AGL15 <-------TEIL <---------ARR11(3)  <------ZmHOX2a(1) <-------TEIL  <---------ALFIN1------>ZmHOX2a(1)    ------->TEIL --------->ARR11(3) ---------ANAC46  --------->ARR14(2) --------->DEAR3(1) <---------REM1(1)  <---------ICU4   ---------   ttgaggagaattcagtagcaaattcgttagtagcttccaccgctcgtttttcctagtattgtagctccaaatgtacatcattaatagatcatataaaaga  13257500    <---------ICU4                                               ----------->RAV1(2)   <---------YAB1                                              --------->ANAC58  <---------AHL20(1)                            --------->AHL20(2)    ------->TEIL  --------->AHL20(1)                     <---------MYB46(3)    --------->ANAC58  <---------AHL20(2)                    --------->ALFIN1      ------>MYB83                    -------  --------->AHL20(2)                  ------->GAMYB           ------>MYB46(1)                -------- --------->YAB1                    --------->MYB52(1)       --------->AtMYB61       --------->HSFB2a(2) ->DOF2      ---------->DOF2     --------->MYB46(3) --------->ZAT6  <---------ZAT14 <---------HSFB2a(2)   aaattataatttcaaaaaaggctcaagttgaagtatccaacggtggtcaatttaagactataccaacgcctgtacttcaaaagtttctgcaagtattcat  13257600                                                            --------->At5g28300                                                            <-----------HVH21                                                           ------->GAMYB                                                        --------->MYB52(1)    <---------At4g35610                                                        <---------DOF5.7(2)   --------->At4g35610   ----------->HVH21                                  ------>ZmHOX2a(1)       --------->ZAT2   ----------->TGA1                                  --------->TOE1(3)        <---------ZAT2 -->ATHB12                     <----------DOF2       --------->TOE2(3)       ----------->RAV1(1) ->ICU4           ----------->GT1             <-----------GT1 <---------WRKY12<------NtERF2         <   tagcagtgacgaattcaaatttgaaaaaaaaaacttttatctgtaaattctccatccttaacggtcaaatttagtcgggcagcagacaaactctcaagtc  13257700                                                                <---------MYB52(1)                                                                <------NtERF2                                                     --------->ARR14(2)                                                     <---------ARR14(2)                                                  <---------ANAC58                                                  <---------ANAC58                                                 <------NtERF2 <-----------HVH21                                                ------>NtERF2  ------>NtERF2                                               <---------bZIP60(1)                                               --------->bZIP60(1)                                               <---------DEAR3(1)                                               <---------RAP2.6(2)        --------->ANAC58                       <---------RAP2.3(3)        --------->ANAC58                      --------->ATERF1(1)<---------ANAC46     --------->ARR14(2)         <------------CBF<---------RAP2.3(1)          *TSS    <------ZmHOX2a(1)     ---------->DOF2   ----------->HVH21  <---------RAP2.6(3) ------ZmHOX2a(2)    ---------->DOF2        ----------->TGA1  --------->DEAR3(1)       --------->CCA1(2)   cgatcaggaaacgaaacgagaacaaaagaaaagagattggattttggtgacggcgtttccttcgccgtcgtgttcaccatgttcaagagagacgactaca  13257800                                   <---------ARR14(2)                                   --------->ARR14(2)                                  <------MYB83                  --------->GLK1(2)                 <---------DAG2   <------MYB46(1)               <---------ARR14(2)                 <----------DOF2 --------->MYB111(1)           <---------GLK1(2)        --------->YAB1          <-----------RAV1(2)  <---------ARR11(3)                            --        <---------ICU4          <---------ANAC46   --------->ANAC46                       <----------DOF2       <---------ATHB12      --------->ALFIN1      --------->ANAC58        <---------TOE1(3)       <-       --------->ICU4    ---------->DOF2           --------->ANAC58        <---------TOE2(3)      <--   ttcgaactaatcatgacccctttttttcaaagtggcaggtactctcgcatttcaagaaatttagagattctgggtttagggttttgctccatctttcatt  13257900                                                                          <---------MYB59                                                                          ------>ZmHOX2a(2)                                                                         <------ZmHOX2a(2)                                                                        <---------ARR11(3)                                                                    ---------->DOF2              <---                                                               <---------AHL20(2)  <-----------GT1                                                              <---------YAB1   <----------DOF2   <---                       ------->GAMYB                       --------->ICU4--------->CCA1(2)    <------                    ----------->RAV1(1)            --------->ARR11(3)   <---------AGP1      <--------                  <------ZmHOX2a(2)                <---------ARR11(3)   <-----------ARR10   ---------          <----------DOF2<---------GLK1(2)         --------->ARR14(2)   --------->ARR11(3)-------->P ------->LBD16   <---------ARR11(3)                <---------ARR14(2)   --------->AGP1    ------>MYB46(1) ------GAMYB  --------->HSFB2a(2)                 --------->RVE1(1)<---------AHL20(2)     ------>MYB83 -------ANAC46<---------HSFB2a(2)                 --------->CCA1(1)--------->AHL20(2)   --------->DEAR3(1)   ccgttgaaaaccctttcgagatcaacagaatttcgaatgaattctcttggaaatatctgcaatttttatttaaagatctaacttttaacgcctaccacac  13258000                                --------->GLK1(2)                               <---------GLK1(2)                               <---------ARR14(2)                         <---------LBD16                       ------>ZmHOX2a(2)                      --------->GLK1(1)                      <---------GLK1(1)                     <---------ANAC58                     --------->ARR11(3)                     <---------ANAC58                       -- ------DAG2          <---------ARR11(3)                    <---------TOE1(2)        <------ZmHOX2a(2) -------DOF2         <---------AGP1                   <---------YAB1               --------->ARR14(2) ---ALFIN1          <---------CCA1(2)              <---------YAB1 --------------------->WRI1    <---- -ALFIN1       <-----------RAV1(1) <---------YAB1 <---------TOE2(3)                --------->AGP1  <- >AtMYB61    <----------DOF2   --------->ARR14(2)--------->YAB1   <----------DOF2  <---------ARR14(2)   ttttcttcaacgtttctttgttggatctctggagattctgagtaattccattgatgattcttgggtttctttcagggtttcgcccgatctatgtttctgc  13258100                                       <---------ZAT18                                       --------->ZAT18                                       --------->LBD16                      --------->ARR14(2)                      <---------ARR14(2)------>NtERF2                     --------->ANAC58                 --------->At4g35610  <---------ANAC58                    --------->ANAC58             --------->ARR14(2)       <---------ANAC58         --------->CCA1(2)  ----------------->AGL2     --------->ANAC58            <---------HSFB2a(2) ------->ARR14(2)<---------ZAT14     <---------LBD16     --------->HSFB2a(2)  ---------->DOF2<------- -----ANAC46<---------GLK1(2)--------->ANAC58    ------>ZmHOX2a(1)      ---------->DOF2     <-------- --------ARR14(2)--------->ZAT14 <----------DOF2--------->TOE2(3) --------->MYB59 <-----------HVH21   gtaaacccatttcagaaactgcagaattcgcaagacttttgcggactactccttaatttctcgagatttaggtccaaagccaaaggtcacatttttaatc  13258200                                                                                     --------->ANAC55(1)                                                                                     --------->ANAC58                                                                                     --------->ANAC58                                                                                     <---------ANAC58                                                                                     --------->ANAC46                                                                                     <---------ANAC55(2)                                                      <---------YAB1                 <---------ANAC55(1)                        <----------DOF2     <---------ANAC46                         --------->ANAC55(2)                     ------->TEIL           <---------ANAC58                <----------DOF2                    <---------CCA1(2)       <---------ANAC58             <---------ARR11(3) ----GT1        <---------ANAC46           <------NtERF2       <---------YAB1        <---------ANAC58 -AHL20(2) ----------->GT1<-----------RAV1(1)        <---------TOE1(2)   --------->ARR11(3)   tctcttcatcacattgtaacttgtatctttgttggataactaggtggcttagtctcatgtttgtcatcaatataagctctttatcttacgtaatgaagtt  13258300  Previous    Next  AGI:  At4g26170.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56780.1); similar to effector of transcription [Brassica napus] (GB:AAT00536.1) Range:  from: 13257777    to: 13259391    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version