Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         ----------->RAV1(1)                         <----------DOF2                 ------>ZmHOX2a(1)         <---------ANAC46      <---------ZAT2        <---------GLK1(2)                  <---------ANAC58      --------->ZAT2 --------->At4g35610 ---->ANAC58   ====================RAV     <---------ANAC58      <---------At4g35610 ---->ANAC46   ----------->RAV1(2)      <---------ATHB12         --------->At4g35610 ---->ANAC58 <-----------GT1        --------->ZAT18  ------>ZmHOX2a(1)   --------->ANAC46   gacactgttagaatttctcctgctccaacattgtaatgtgcaatgacttgttgtcctctaaaaccccagctttccacttaacatctgtctgtgtgataac  13097400                                          --------->ARR14(2)                                          <---------ARR14(2) ---------->DOF2                                          <---------GLK1(2) ------>ZmHOX2a(1)       <---------MYB52(1)               --------->ANAC46  ------>ZmHOX2a(2)      --------->At5g28300            ----------->RAV1(1)<---------ARR11(3) --------->ZAT18                   --------->At4g35610  --------->ARR11(3)                          - <---------ZAT14                   --------->ZAT18    <---------YAB1                             <--- <---------ABI4(2)                 <---------ZAT14  --------->YAB1                              ----- --------->ZAT14                --------->At4g35610 <---------ICU4     --------->LBD16       --------   gagtccaccgtgatttcaaagactccacatagtcgtctgcaccagaaactctgatcatgatcctaaagggaccctgaaaatgtattactgctagttagat  13097500                                        --------->ARR14(2)                                         <-                                        <---------GLK1(2)                  <----------ID1   =========                                        <---------ARR14(2)                --------->ZAT18   <-------- -------->ANAC46                      --------->LBD16           --------->HSFB2a(2)     <---------CCA1(2) ----TEIL     --------->ANAC58      <---------LBD16             <---------HSFB2a(2)     ---------->ID1 ---->CCA1(2) --------->ANAC58     --------->MYB52(1)          <---------LBD16        <---------ANAC58 ->MYB59      --------->ANAC46 <---------ICU4                 ------>ZmHOX2a(1)       <---------ANAC58   acacgagtctagtcacaaggaaggaaaacaaaaacattaccggattttgagctagaaactggtcctctggaacaagagcgccaaactttcgtctctttgc  13097600             <---------ANAC58             <---------ANAC46                            --------->ALFIN1                    <-------             <---------ANAC58                         <---------DEAR3(1)                   --------->At4g35610            --------->ALFIN1                         <---------At4g35610                   <---------At4g35610        <---------TOE1(2)                            --------->At4g35610                   --------->ZAT2 --------->TGA1a<---------ZAT14                <-----------ARR10                           ---------- <---------TGA1a<---------ZAT18               <---------CCA1(2)                 ---------->DOF2   <-- --------ALFIN1 --------->ZAT14              <---------MYB52(1)        <---------YAB1      <---------ZAT2 ==========bZIP_DOF                         <---------DAG2        --------->TOE2(3)      <-----------RAV1(2) --DOF2------>ZmHOX2a(1) ------->TEIL   <---------ALFIN1 <---------AtMYB61<---------YAB1<-------TEIL   ctcacgttcctagggtcgtgcagtttgcatcttctccattgaacacccttatctcagcggtggtatttccttcattatacttaaaaggggttcagctggt  13097700                                                                                                <----                                                                                             <<<<<<<<                                                 <---------ALFIN1                          <---------ANAC58         <---------YAB1                          --------->AtMYB61                         <---------ANAC58       --------->YAB1                      <---------WRKY45                           --------->ARR14(2) --------->ANAC58                <---------At4g35610                                 ------>MYB46(1) --------->ANAC58                --------->At4g35610       --------->ANAC58          ------>MYB83 --MYB46(3)                  <-----------HVH21--------->ANAC46                     <---------MYB59  - ->RAV1(2)              ------>ZmHOX2a(1)  <---------WRKY38(1)                  <-----------GT1 <---- ----NtERF2       ----------->ARR10       <<<<<<<<<WRKY6   --------->ANAC58 --------->AHL20(2)  <----   ggcactaaatcacaatagctaacatcctccttgtcagcaaaatagtcaacaccactcgaaaacgcatgcatagcgagatttattaccaaataggcgttgc  13097800         <---------ANAC58         <---------ANAC58 <-----------GT1 -----ANAC58        ------------>CBF <MYB2   <---------ANAC46                                                           <---------TOE2(3) --------->ID1 --------->ANAC58           --------->ICU4                      --------------->AGL15 -----ANAC46   --------->ANAC58    --------->ZAT14    ----------->GT1         <---------------AGL15 -----ANAC58   --------->ANAC46 <------------CBF<---------TOE2(3)       <---------ICU4  <----------ID1   ttgtcactatgccgttcaagacatcaataccctacattgcagacaagattaaggcaagggaaaatgagttttaaaaatgacttattaagggagacaaaat  13097900                     --------->ANAC58                     --------->ANAC58                     --------->ANAC46                  <---------ZAT18                --------->ZAT2                --------->MYB46(2)                <---------ZAT2                --------->MYB111(1)                   --------->ANAC46                <---------At4g35610           --------->MYB52(2)                  --------->ZAT6          <-----------ARR10       --------->GLK1(1)                             <-----------GT1     -         <---------CCA1(2)        <---------GLK1(1)  ---------->DOF2    --------->YAB1  ----------->GT1 <---------ZAT18--------->At4g35610        ------------>MYB.PH3(2)     <---------YAB1--------->MYB52(1)   ttgtgaacttcaaatctcagctcaccccatgtccagatttcagcatgttagttagaaaagaagaagtaagagtatcatggtataacacgacggtttattc  13098000                                                                                --------->GLK1(2)                                                                         <---------ANAC58                                                                         <---------ANAC58                                                                         <---------ANAC46                                                                     <------------CBF                                                                    --------->ATHB12                                                                  <-----------HVH21                                                       --------->ANAC58  ----------->GT1                            --------->TOE2(3)          --------->ANAC46 --------->MYB55(2)                    ------------>CBF                   --------->ANAC58 <---------MYB46(3)                --------->ANAC46              --------->ARR14(2) <---------ANAC55(2)                --------->ANAC58          --------->ZAT6         --------->ANAC55(2)         ----------->GT1    --------->TOE1(3) <---------ARR14(2)------>ZmHOX2a(2) ----------->CBF--------->ANAC58    --------->MYB59--------->AtLEC2<---------MYB52(1)          ------   taaacaatgacatgttacaagaaacaatgaccttaattttggtaacagtatccatccaagcagtgatccgtcattgggtgaaattctagcaatacaatta  13098100              --------->ZAT18              <---------ZAT18              --------->ZAT14              <---------ZAT14    --------->ARR14(2)            --------->ICU4    --------->ARR11(3)            <---------YAB1                      --------->ANAC55(2)    <---------ARR11(3)        --------->ARR11(3)                   <---------ARR14(2)    <---------ARR14(2)<---------AHL20(2)                           --------->ARR14(2)      <---------   <---------CCA1(2) --------->AHL20(2) --------->ANAC46          <------ZmHOX2a(1)    <---------CCA1(2) ----------->GT1----------->RAV1(1)<---------ICU4       <---------At4g35610         <---------ATHB12 --->YAB1   --------->ANAC46  <---------ARR11(3)        --------->At4g35610  --------->KAN4(2)   ----   gactggtatcttctactgcaccatttattcaagataatgaatactccatttgctactaagctcaaataggatacttgtttattccaatcgtctctttaca  13098200    ------>ZmHOX2a(2)   <------ZmHOX2a(2)                    --------->AHL20(2)                               ----------->RAV1(1)  <---------ARR14(2)                   <<<<<<<<<ARR2                           --------->YAB1  <---------ARR11(3)                  ------------------------>ANAC81         <---------ATHB12  --------->ARR11(3)              --------->ANAC58    <---------AHL20(2)   --------->AHL20(2)  --------->ARR14(2)         --------->ANAC58    --------->AHL20(2)        <---------AHL20(2) <------ZmHOX2a(1)           --------->ANAC58--------->AHL20(2)           <---------ATHB12 --------->ANAC46 -DOF2               ---------->DOF2 --------->WOX13(1)           ---------->DOF2 --------->AHL20(2) ------>DOF2--------->MYB52(1)    --------->ANAC58    --------->AHL20(2)  --------->AHL20(2)     ----   aaaggatcttaaactaccgagccaaaagagcaagacaaacaatcaaataaactaaataaaatcgaaatcaaagccaataaatcataaaataccacagaac  13098300  Previous    Next  AGI:  At4g25707.1    Description:  unknown protein Range:  from: 13097649    to: 13097771    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g25710.1    Description:  kelch repeat-containing F-box family protein. Identical to F-box/Kelch-repeat protein At4g25710 [Arabidopsis Thaliana] (GB:Q9SZZ9;GB:Q67YB0); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT5G51250.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Kelch repeat type 2 (InterPro:IPR011498); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro doma Range:  from: 13098150    to: 13099540    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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