Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <      <---------YAB1                                                                                <  <---------ANAC46                                                                                 -- ------MYB46(1)                                                                                   <-- ------MYB83                               --------->MYB52(1)                                     <-- ---------ANAC46                    --------->At4g35610                                       ------- ----AHL20(2)                       <---------At4g35610                                      <------- -->AHL20(2)                      <-----------RAV1(2)                                       <-------- ---AHL20(2)             --------->HSFB2a(2)                            <----------DOF2     <-------- --YAB1                  <---------HSFB2a(2)<---------TOE2(3)     <---------MYB52(1) --------->MYB52(1)   tttggtgtatgaatggatggactaattcgagacgaatcagatggctaacgaaaaccagacttgtgtccgttttgcattttcgaaaattatcggaagaatc  13087800        <-----------GT1                                                   <---------At4g35610     --------->ATHB12                                                     --------->At4g35610 ---------WRKY38(1)                                              <---------ANAC58 ---------WRKY12                                        --------->At4g35610 ------->WRKY18(1)                                    --------->YAB1  <-----------HVH21 ------ZAP1                                         ------->TEIL <-------GAMYB                  <---- ---------HVH21                         <---------AHL20(2)       <---------ANAC58        <---------ICU4 -->GLK1(2)                            --------->AHL20(2)       <---------MYB46(3)      <---------YAB1 --ARR14(2)                            <---------AHL20(2)    <---------ANAC58  --------->ANAC55(2) -HSFC1(2)                  <-----------GT1 --------->YAB1   <---------ANAC58  <---------ANAC55(2) -HSFB2a(1)    <----------DOF2--------->ANAC46   <---------YAB1<---------TOE1(2)        --------->ICU4   ggtcaattgattaccctcttttttttttgtttaccccattttttaatagtcatgaatcatcttccttggttgtgtcagattacttaagtcattattttgt  13087900                                                                                               ------                                                                                               ------                                                      ---------->DOF2     ---------->DOF2      ------                                           --------->O2             <---------AHL20(2)      <--------        <----------DOF2--------->ATHB12    <---------O2          ----------->GT1       <-------TEIL -----YAB1        <---------YAB1       <------ZmHOX2a(1)         --------->MYB52(2)--------->DAG2   -   tatagagatgctttactagtatttttgatttgttttggtaaggacacttgtctagctaaagaaatgttagttaaatgaaagaaaaaaggttcagtagttg  13088000                                              --------->YAB1                                              --------->TOE1(3)                                              --------->TOE2(3)                                   <---------AHL20(2)                                   <---------YAB1                   <-------MYC2                                   --------->AHL20(2)               <-------MYC3                                  <---------AHL20(2)                ------->MYC3                                  --------->AHL20(2)               <---------ANAC58 ----->HVH21                      <---------AHL20(1)  --------->YAB1------->MYC2 --->WRKY38(1)          <-------TEIL         <---------YAB1 --------->TOE2(3) --->WRKY12 ------->GAMYB         --------->AHL20(1) <-------TEIL  <---------ANAC58 -MYB46(3)--------->At4g35610    --------->YAB1  --------->AHL20(2)>>>>>>>>CAMTA3     ---------->DOF2 ---------->GT1       --------->TOE2(3)    <-----------GT1--------->GLK1(2)   ----------->GT1   acccgtttaatcaactgcgaacaacgttcatactaatataatttgttaccataaattcataatctaaacgcgtgcttaagttgtaaacaaaaggaattaa  13088100                                                                                   <------NtERF2                                                                                   <---------SPL7                                                                                   --------->ABI4(1)                                                                                  --------->RRTF1(2)                                                                                  --------->RAP2.3(2)                                                                                  --------->DEAR3(1)                                                                                  --------->RAP2.6(2)                                                                                 --------->RAP2.3(1)                                                                                ------>NtERF2                                                                               --------->ANAC46                                                                               <---------ALFIN1                                                                               --------->AtMYB61                                                                            <---------ALFIN1                                                                            --------->DEAR3(1)                                                                            --------->AtMYB61                                                                           --------->MYB46(3)                                                                         --------->DEAR3(1)                                                                         <---------ALFIN1                                                                         --------->AtMYB61                                                                        --------->MYB46(3)                                                                      <---------ALFIN1                                                                      --------->AtMYB61                                                                      --------->DEAR3(1)                                                                     --------->MYB46(3)                                                                   --------->DEAR3(1)     <---------GLK1(2)                     <---------LBD16                               --------->AtMYB61    XXXXXXXXXXXXX                   --------->ARR14(2)                              <---------ALFIN1------>NtERF2                   <---------ARR14(2)                             <---------MYB55(2) ----------->RAV1(1)               ------------>CBF                                   --------->MYB46(3)<---------ALFIN1          --------->DAG2                                         ------>NtERF2 --------->DEAR3(1)         ---------->DOF2                                        <---------ALFIN1--------->ABI4(1)      --------->ANAC58        --------->DAG2                    --------->ANAC46<---------ATERF1(1)      <---------ANAC55(2)    ---------->DOF2                <------ZmHOX2a(2)  ------->GAMYB      --------->ANAC58     <------ZmHOX2a(1)               --------->ARR14(2)  --------->DREB2C(2)      --------->ANAC55(2) --------->ANAC58     <---------YAB1------>ZmHOX2a(2)--------->MYB46(3)      --------->ANAC46 --------->LBD16--------->At5g28300  --------->TCP20 <---------MYB55(2)      --------->ANAC55(1) --------->ANAC58 <------------CBF<---------ARR14(2)--------->ABI4(1) <<<<<< ----------->HVH21<---------GLK1(1)  ----------->GT1     <---------MYB46(3)*TSS======================   caagggacacgtaaagtagcaattccgcaggaaaagcgagggtaaaattgtcatttcagtggatccccaccaccaccaccaccgccgcaccagtttcttc  13088200                                                                                --------->CCA1(2)                                                                                <------ZmHOX2a(2)                                                                               --------->AGP1                                                                               <---------ARR14(2)                                                                               --------->ARR11(3)                                                                               --------->ARR14(2)                                                                               <---------ARR11(3)                                                                              --------->GLK1(1)                                                                              <---------GLK1(1)                                                                             ----------->ARR10                                                                          --------->LBD16                                                                         --------->HSFB2a(2)        --------->O2                                                     <---------LBD16           --       <---------TOE1(2)                                                <---------ANAC46         <---      ------>ZmHOX2a(1)                                                 <---------LBD16        ------ <---------At4g35610                                                   <---------LBD16         <----- XXXXXXX>MIR837-5P                                                  <----------DOF2      <---------MYB46(3) <<<TBF1--------->TGA1a<---------GLK1(1)                        <---------GLK1(1)------>ZmHOX2a(2)--- =================MYC_MYB       >>>>>>>>>TBF1             <----------DOF2<---------HSFB2a(2)   <-----   ttcatctcctacgtctgaaattgagaaatcggaagaagaaagataagtctaatcttgtgcctttagatttcttttcggggagatctagtagttgttggat  13088300                                                                                  <----------DOF2                                                                                --------------->AGL15                                                                                <---------------AGL15                                                                               <-----------------AGL3                              ----------------------->TaNAC69(2)               <-----------------AGL2                              <----------DOF2                                  <---------ARR11(3)                     <---------SPL7                                     --------->TOE1(2)                    <------MYB46(1)                                     --------->TOE2(2) ------->TOE2(3)    <------MYB83 <---------TOE2(3)                    <---------ARR14(2) ----TEIL          <---------------AtSPL3                             --------->GLK1(2)    <------MYB83 --->ARR14(2)      <---------------AtSPL8                             --------->ARR14(2)   <------MYB46(1) ----ARR14(2)      --------->MYB59                      <---------------AGL15 <---------ZAT2<------ZmHOX2a(1) -------->GT1   <---------ARR14(2)                      ========================================MADS_MADS ----GLK1(2)    --------->ARR14(2)                 ---------->DOF2   <---------GLK1(2)   <--------P<-   tcgttaaacggagaagtggatttggtacgagtctttaggtttccttcttcaccaaaagctctatatagagagaatctgcgagctctttttggtaggaaat  13088400              <------MYB46(1)              <------MYB83              ----------->GT1           <---------ANAC58              <---------MYB46(3)           <---------ANAC58             <--------P           <---------ANAC46            <-------GAMYB           <---------AtLEC2           <---------MYB46(3)      <-----------RAV1(1)            <---------TOE2(2)                                   --------->MYB46(3)    <---------ANAC46              <---------ANAC46                          ------>ZmHOX2a(2)    <---------ANAC58            --------->MYB52(1)           ----------->HVH21         --------->MYB52(1)    <---------ANAC58           ----------->HVH21      <-----------GT1     --------->ARR14(2)   <-------TEIL                ----------->TGA1    --------->ARR14(2)     <---------ARR14(2) --------TOE2(3)               <---------ATHB12    <---------ARR14(2)   <---------MYB46(3)   tagggttcgtgttgcttggtaaatatagaatcaatgacggaggttgttctgcatatatacgatgtgacgaacagtggatcggagaagactaacaacacca  13088500                                              --------->KAN4(2)                                             <---------KAN4(1)                                             --------->KAN4(1)                                             <----------TaMYB80                                            ---------->TaMYB80                                            --------->ARR14(2)                                            <---------KAN4(2)                                          --------->At5g28300               <-------TEIL               <------NtERF2      <------ZmHOX2a(2)        ------>ZmHOX2a(2)     --------->AGP1 ---------->DOF2      ----------->GT1       <---------------AtSPL8    --------->At4g35610      <---------ARR14(2)           <----------DOF2    <---------At4g35610      --------->ARR14(2)     --------->ANAC46                        ------->TEIL   ttgttcagatcaataggttcttcaaagacgggatcggtcttggcggtatattccacagcgctattcaggtactactcttcgtctatattctatgaatcta  13088600                                                         <------MYB83                                                         <------MYB46(1)                            -                                                     <---------ARR14(2)                            <-                                                     --------->ARR11(1)                            --                                            --------------->AGL15                                  --           --------->YAB1           <---------AtMYB61--------->ARR14(2)                           ---           --------->ATHB51    <------MYB46(1)     ----------->ARR10              ----------->GT1<---          --------->ICU4       <------MYB83 <---------------AGL15             ------->TEIL       ----  <---------------AtSPL8   <---------ZAT2   <----------DOF2               ------->TEIL          -----  --------------->AtSPL8   --------->ZAT2   <---------DAG2           <---------ANAC46           -----   catttatgtacaattatcgatgatgtctaagcttggttttggtctactttatgtagatttggtttttgtttctgtgtatgtatgtggaaattaagaagtt  13088700  Previous    Next  AGI:  At4g25680.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49475.1); contains InterPro domain Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580) Range:  from: 13088175    to: 13090170    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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