Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->WOX13(1)                                                                                    <-----------HVH21                                                                                  -------->ABF1                                                                                  <-------MYC3                                                                                  ------->MYC2                                                                                  ------->MYC3                                                                                  ------->MYC4                                                                                  <-------MYC4                                                                                  <-------MYC2                                                                                 --------->ANAC55(2)                                                                                 <---------ANAC55(2)                                                                                 ====================                                                                                 <---------O2                                                                                 <--------ABF1           --------->YAB1                                                        --------->O2          <---------YAB1                                                         --------->TGA1a      ------>MYB46(1)         ------>MYB83                                       <---------TGA1a      ------>MYB83            ------>MYB46(1)             ---------->DOF2       <--------------------    --------->AtMYB61       --------->AtMYB61             =================================bZIP_DOF    --------->DEAR3(1)      ------->GAMYB --------->WOX13(1)                 <------ZmHOX2a(1)  <---- ------>DOF2               --------->MYB46(3)  ------>ZmHOX2a(1)             <-----------------PIF3(1)   aaagcaccatccatgataaacacattgcaacctcccccattgatcaatccttccatcagacaaaggagcaagacgatgaggacacgtgtcatccatcact  13082800                                    <---------ATHB12                                  ------>MYB46(1)                                ------->GAMYB                                --------->AtMYB61                              --------->ANAC58                              --------->ANAC58                            --------->MYB46(3)                          ------>MYB46(1)                                         ------>ZmHOX2a(2)                          ------>MYB83--------->WOX13(1)                        --------->ARR11(3)                        <---------MYB111(2)                                     <---------ARR11(3)                        <---------MYB55(2)                         --------->HSFB2a(1)                        --------->AtMYB61                          <---------HSFC1(2)                        <---------MYB111(1)                        --------->HSFC1(2)                        --------->MYB46(3)                         <---------HSFB2a(1)      ---------     <---------ANAC58   <---------MYB46(2)                       --------->ARR14(2)    --------->ARR14(2)     <---------ANAC58  --------->ANAC58           <----------DOF2<---------ARR14(2)    <---------ARR14(2) ======bZIP_DOF        --------->ANAC58     --------->ANAC46    ========================HOX2a_HOX2a ---TaNAC69(2)         --------->ANAC46    --------->LBD16      =========================HOX2a_HOX2a ------DOF2     ------>ZmHOX2a(1) ------>MYB83<---------CCA1(2) <------ZmHOX2a(1)<------ZmHOX2a(2)   ttccattgcttctcgttcctatcccaccaaacaaccaaatcaatccccataactttcttcccatgaggaaccttcttgtcaagatcgcaaattggcatca  13082900                                                                                           --------->ICU4                                                                                      <---------At4g35610                                                                                      --------->At4g35610                                                                                    <---------ANAC46                                                                                    <---------RAP2.3(2)                                                                                    <---------RAP2.6(2)                                                                                   <---------At4g35610                                                                               <---------REM1(1)                                                                               <---------bZIP60(2)                    <---------ATHB12                                           <---------ANAC58                   ------>MYB46(1)                                             <---------ANAC58                   ------>MYB83                                       --------->GLK1(2)    <---------YAB1                  --------->WOX13(1)                                  <---------ARR14(2) <---------At4g35610             <---------SPL7                                     --------->ALFIN1  --------->MYB52(1)             <---------ZAT18                                  --------->LBD16 <---------TOE2(3)     -             --------->ZAT18         --------->LBD16        <---------LBD16  <---------DOF5.7(2) <---            <---------ANAC58   --------->ANAC46           --------->ARR14(2)----------->HVH21 -------            <---------ANAC58   ----------->HVH21          <---------ARR14(2)--------->WRKY12---------      --------->WOX13(1)       <---------ETT(1)       <-----------RAV1(2)  --------->DOF5.7(2)<------ >bZIP60(1)--------------->AtSPL3  <---------LBD16  <----------DOF2   --------->ARR14(2)<---------MYB46(3)   ctgggtaccaattagcgtaccaatcgaacttatccgacccgggttcgaatagggcttcaggttccggtggagaattcgttgacgtagcggctgatgatga  13083000                                              --------->DAG2       --------->YAB1                 --------->LBD16                 <---------ANAC58 <---------MYB46(3)                   <---------MYB46(3)              <---------ANAC58 -------->ALFIN1  <---------MYB46(3) <---------ANAC46               <------MYB83 ------AtMYB61  <-------GAMYB        <---------ANAC58               <------MYB46(1) -->ICU4       <---------MYB46(3)    <---------ANAC58       --------->CCA1(2) >YAB1<---------YAB1                <---------LBD16     <------ZmHOX2a(1)                 --------->At4g35610 ---YAB1     <---------LBD16   --------->ATHB12     --------->ICU4<--------P              -----------   tggtggtgatgatactgcggttgtgaatcgacttgatttgcgggtgataagggaattaggagaaatgggtaggcttggattggagaaggaacatctgaaa  13083100                                                                    <---------AtMYB61                                                                    --------->ALFIN1                                                                  <---------ANAC46                                                                  <---------ANAC58                                                                  <-----------RAV1(1)                                                                <---------ANAC46                                                              <-------GAMYB      ------->GAMYB                                                             <---------ANAC58   <---------LBD16                                                             <---------ANAC58  --------->MYB52(1)               --------->GLK1(2)                             <---------ANAC46  -------->P               --------->ARR14(2)                       <---------AtLEC2      --------->MYB55(1)     <---------ANAC58                              <---------HSFC1(2)         ------->GAMYB     --------->ANAC55(2)                           --------->HSFC1(2)<---------ANAC46       ---------     <---------ANAC55(2)                           --------->HSFB2a(1)       --------->MYB46(3)     <---------ANAC58                              --------->At4g35610       <---------MYB52(2)     <---------ANAC46                              <---------At4g35610  ----------->GT1--------->CCA1(2)  <---------ARR14(2)                               <---------HSFB2a(1)  <---------MYB46(3)  --------- >RAV1(2)      <---------ARR14(2)                  --------->ZAT2 <---------ANAC58--------->LBD16   -   cgaggtttcgtattgagaattcggagcgatggaagagcgcatgcagcaagagcagcttccatggcgttgtgtggtggtaacaaccggagagacgaagcaa  13083200                                                                                          <--------HAHB4                                                                  <------ZmHOX2a(1)       --------->YAB1                                                               <-----------RAV1(2)        <---------ICU4                                                               <---------LBD16           <---------YAB1                     <----------DOF2                       --------->ARR11(3)            --------->ICU4                ------>MYB46(1)                           --------->CCA1(1)            --------->YAB1                ------>MYB83             --------->MYB52(1)<---------ARR11(3)    <------------CBF      *TSS   ------------>CBF   <---------AHL20(2)        --------->RVE1(1)   ------------>CBF >ANAC58   <-----------GT1      --------->AHL20(2)    --------->AHL20(2)    <-----------GT1 >ANAC58 <----------DOF2       --------->AHL20(2)     <---------AHL20(2)  <---------AHL20(2)   <----- --------->DOF2--------->WOX13(1)--------->YAB1      --------->AHL20(2)------->TEIL --------->YAB1   atgaaagtcttctttaccaatctcttttgacaaatttataatccaacggttcaaattaaaatatctcaggatgtatttaaaccaattgataatcattttt  13083300                                                                       --------->ALFIN1                                                                   ---------->DOF2                                                              --------->ATERF1(1)                                               <---------ANAC58  <------NtERF2                                               <---------ANAC46 <---------DEAR3(2)                                               <---------ANAC58 ------>NtERF2                                          <---------DEAR3(2) ------>NtERF2                                          <---------MYB46(3) <---------ATERF1(1)                                         <---------At1g77200 <---------SPL7                                         <---------DREB2C(2) <-----------HVH21                     --                                         <---------DEAR4(1) <---------DEAR3(1)                     <-                                         <---------ANAC46   --------->DEAR3(1)                  -----                                      --------->ALFIN1<---------ARR14(2)                     --------                            ---------->DOF2 <---------MYB52(1)<------NtERF2                 ---------       --------->YAB1    <---------WOX13(1)<-------GAMYB    <---------ANAC46                <--------     <---------TOE2(3)  <------------CBF <---------DEAR3(1)--------->RAP2.3(1)          ------>ZmHOX2a(1) <----------DOF2     <---------MYB52(1)<-----------HVH21--------->DEAR3(2)              <----------DOF2 ------GT1         ----------->GT1---------->DOF2<---------ZAT6<---------DEAR3(1)       =============   ctggtttaatgaaaactaaaccggttaattgaaagagaaagtgtcggttgagtgtgaaaccggcgtcggcaaagtgagggtataagggtcctttccagac  13083400                          --------->ANAC46                          --------->ANAC58                          --------->TGA1a                          --------->O2 --------->ANAC46         --------->ANAC58 ------->AtMYB61          --------->bZIP60(2) --------ALFIN1           <---------TGA1a                                            <------ZmHOX2a(2) ---->ANAC46              <---------O2                                         <----------DOF2 ->ANAC46                <---------TOE1(2)                                   --------->At4g35610 >HSFB2a(2)     *TSS    <---------ALFIN1                                     <---------At4g35610 -HSFB2a(2)    ------------>CBF                        --------->CCA1(2) --------->TOE2(3)--------->GLK1(2) ===================================bZIP_DOF        ----------->GT1   --------->RVE1(1)   <---------ARR11(3)   accacagcatcagtttcttcaatctcccacgtctgagattgaaaagtttgggagaagataaacaaactcaaaatacctcagctttagatcaaaatctaaa  13083500                              ------>ZmHOX2a(2)                             <------ZmHOX2a(2)                            --------->ARR11(3)                               --------->SPL7                     <---------ANAC46                                      <---------SPL7                <---------MYB46(3)                                        <------MYB83               <---------AtMYB61                                          <------MYB46(1)             <---------ANAC46--------->CCA1(2)                           --------->MYB59           <---------ZAT14  <---------ARR11(3)                           <---------------AtSPL3           --------->ZAT18  --------->AGP1                            <---------ARR14(2)           --------->ZAT14  >>>>>>>>>GATA-2           <---------MYB46(3) <---------------AtSPL8        <---------ANAC58    >>>>>>>>>GATA-3  --------->GLK1(2)        --------->ARR14(2)        <---------ANAC46    >>>>>>>>>GATA-1  <---------ARR14(2) --------->DAG2        <---------ANAC58    >>>>>>>>>GATA-4  --------->ARR14(2)---------->DOF2   --------->GLK1(2)   aacaagagtttcgtgcagtggtttcttagagatctagtagattagagaatttggatttgttgaagaaaagtggatttggtacgattctataggtttcctt  13083600                                                                                             <-------                                       <---------ANAC58                                     <--------P                              --------->ZAT2                                               <-------GAMYB                              <---------ZAT2                   <---------ANAC46           <---------MYB46(3)                        --------->TOE1(2)                      <---------ANAC58          <---------AtMYB61                        --------->TOE2(2)               <---------ANAC58                <------NtERF2                      --------->GLK1(2)<---------ANAC58 <---------ANAC46              <---------ANAC58                      --------->ARR14(2)     <---------AHL20(2)<---------ANAC58       <---------ANAC58                      <---------ARR14(2)  ----------->GT1   <---------CCA1(2)         <---------ANAC46                     <---------GLK1(2) <---------ANAC46 <---------ANAC58              <---------DEAR3(1)           <---------YAB1     --------->At4g35610      <-------TEIL             --------->ATHB12   <-       <---------At4g35610    <---------At4g35610  <---------TOE2(3) ---------->DOF2 <---------LBD16   cttctctgaagctactatagagagaatctgcgagctcaatttcgtagtaaattagggttcgtgtttcttggtaaagatagaatcaatggcggaggttgtt  13083700  Previous    Next  AGI:  At4g25650.1    Description:  ACD1-LIKE; electron carrier. similar to ACD1 (ACCELERATED CELL DEATH 1) [Arabidopsis thaliana] (TAIR:AT3G44880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22069.1); contains InterPro domain Rieske [2Fe-2S] region; (InterPro:IPR005806); contains InterPro domain Pheophorbide a oxygenase (InterPro:IPR013626) Range:  from: 13080910    to: 13083206    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g25660.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49475.1); contains InterPro domain Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580) Range:  from: 13083416    to: 13085197    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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