Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->MYB46(3)                                                         --------->HSFB2a(2)         ------>ZmHOX2a(2)                                                         <---------HSFB2a(2)         ================                                                         <---------HSFC1(1)        --------->ARR11(3)                                                         --------->HSFC1(1)--------->TGA1a                                                    <---------At4g35610    <---------O2 ------MYB46(3)                                   <-----------------AGL3   --------->O2<-----------RAV1(1) -----WOX13(1)                                    <-----------------AGL2   ========================== -->ATHB12                     ---------->DOF2   <---------At4g35610       <---------TGA1a --YAB1               ----------->RAV1(2)  --------->TOE2(3)--------->ARR14(2)     <---------ARR11(3)   tgttgttcccgtttcaatgtagaaacctggtgctaaagttctataccttggtgctgcttctggaaccacagtctctcatgtgtctgatcttgttggccct  13075200                                                                                                   <-                                                                                            ---------                                                                                          --------->ALFIN1                                                                                          <---------ANAC46                                                                              <---------YAB1<--------                  <-----------RAV1(1)                                         ----------->HVH21   <--               <---------MYB52(1)                                            ------>ZmHOX2a(2)   <---              <---------DAG2                                                <---------At4g35610------              ------>ZmHOX2a(1)                                      <----------DOF2      <---------ANAC58              <----------DOF2                                      <---------ANAC58       <---------ANAC58     --------->ARR14(2)   --------->ICU4                           <---------ANAC58     <---------ANAC46     <---------ARR14(2)   <---------YAB1 <---------ANAC58    <---------AHL20(1)         <---------ANAC58 <---------At4g35610   <---------YAB1    <---------O2        --------->ARR11(3)         <---------ANAC58 --------->At4g35610 ----------->GT1     <---------ANAC46    --------->AHL20(1)     <------ZmHOX2a(1) ====================HOX2a_HOX2a         --------->O2   <---------ANAC46    --------->At4g35610<----- ========================bZIP_DOF        <---------ANAC58   <---------CCA1(2)==============HOX2a_HOX2a   gtaagcagaacccgtcctttatgttgtgattatcaggttttagacgtgtattggagtttcttatatattgcctttgtgatctgataggaggggtgtgtgt  13075300   <---------MYB52(1)  <-------GAMYB <---------MYB46(3)                                                                            ------ --------LBD16                                                                                 ------ >ALFIN1                                                                                       <----- -ANAC46                                                                                       <----- -------TOE1(1)                   <------MYB46(1)                        --------->YAB1    --------->ANAC58 ------REM1(2)                    <------MYB83                          <---------ATHB12   --------->ANAC46 --->REM1(2)          --------->ALFIN1        ---------->DOF2         --------->WOX13(1)   --------->ANAC58 ----SPL7    <---------YAB1    --------->CCA1(2)         --------->MYB46(3)     <------ZmHOX2a(1)   acgcggttgagttttctcatagaagtggtagagatttggtgaacatggcaaagaagagaaccaatgttattccaatcatcgaggatgctagacacccagc  13075400                                                                      <----------DOF2                                                          <-----------RAV1(2)             --------->REM1(2)                           <------ZmHOX2a(2)          <---------ANAC46                              --------->ARR14(2) --->At4g35610         <--------P         ============================RAV                 ------->TEIL --->ZAT2 <---------ANAC58                <---------REM1(1)       <---------ANAC58     <---------ATHB12 ----At4g35610       --------->ATHB12     <-----------RAV1(1)     <---------ANAC58     <---------YAB1 ----ZAT2 <---------ANAC58<---------TOE2(3)             <---------ARR14(2)         ------------>CBF<-   taaatacagaatgcttgtaggcatggttgatgttatcttctctgatgttgctcagccagatcaggtttgcttcttttgtttaactcacaatgaatgtcta  13075500                                                                                      <---------ANAC58                                                                           --------->ICU4                                                                           <---------ATHB12<---------GLK1(2)                                                                          xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                        *TSS          <---------ANAC46                     ------------>CBF                              <------------CBF   <---------ANAC58            --------->DAG2                                        --------->ATHB12------>ZmHOX2a(2)           ---------->DOF2                     <----------DOF2    <---------ICU4<---------ARR11(3)      --------------->AGL15               ------>ZmHOX2a(1)      <---------YAB1 --------->ARR11(3)<--      --------->TOE2(3)        --------->AHL20(2)              --------->YAB1 <---------YAB1<-------- --------AHL20(2) <---------WRKY18(1)     <----------DOF2     <---------YAB1--------->YAB1 --------->ARR14(2)   aatatttgcctcaaaaagcttgacccaataccattatatgtgtcctttgctttaaaatggtgttttgataattgcaaatgatgatcttacttggattccc  13075600        <---------ICU4       <---------YAB1       --------->ICU4     <---------ICU4                                                                 <-----------GT1    <------ZmHOX2a(2)                                                        --------->YAB1   <---------ARR11(3)                                                        --------->TOE2(3)   --------->ARR11(3)                                                  --------->TOE1(3)  <---------At4g35610                     ----------->GT1              --------->TOE2(3)            < ---------HVH21xxxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)             <---------TOE2(3)      ------->TEIL -GLK1(1) <---------YAB1       --------->GLK1(2)                     <---------TOE1(3)  -------------   cttcagatcattatgggtgatgcaatctccaagtttctgatgtactgaaaattcttgtttttgtttttgttaagcttaatcttattttactatgtacttg  13075700                                                <---------ANAC58                                                <---------ANAC58              ------>MYB46(1)                                           --------->ATHB12                   -------->P                                           <---------ICU4                     ------>MYB83                                           -------->ATHB1                   <---------MYB59        <---------ANAC58                   --------->ATHB51              <-----------GT1        <---------ANAC58                  <---------YAB1            ----------->GT1 -----------GT1                 <---------AHL20(2)               ------>ZmHOX2a(1) -->AtSPL8                      --------->AHL20(2)             ----------->RAV1(2)   ttttacaatttcgtttttaagaacaatactaaatttaaatgtctattattgctcggttttggttctcctgatgttaaacctacttgttttctaaatgcca  13075800                                                                                   ==================                                                                                   ------>ZmHOX2a(2)                                                                                  ===================                                                                                  <------ZmHOX2a(2)                                                                                 <---------ARR14(2)                                                                                 --------->ARR14(2)                                                                                 <-----------ARR10                     --------->ZAT14                                             <---------ARR14(3)                 --------->HSFB2a(2)                                             --------->ARR14(3)             <---------ANAC58                                                    --------->ARR11(3)             <---------ANAC58                                             --------->ANAC58             <---------ANAC46                                          <---------ZAT14          <--------P <---------ZAT18                                   --------->ZAT14         <---------ANAC58                                              --------->ZAT2    ============         <---------ANAC58                                              --------->REM1(2) ------------         <-------GAMYB       <-----------GT1                          --------->ALFIN1   <----------DOF2      <---------ANAC46   <----------DOF2                      --------->AHL20(2) <---------ARR11(3) <---------ZAT2  <---------HSFB2a(2)                --------------->AtSPL8--------->ANAC58 <---------At4g35610 <---------ZAT14              <-----------GT1<-----------GT1<------ZmHOX2a(1)   -   ttcagcttgtgggttgcttctagtatactttatactgttttgtttatgaaattttctgtgccatttaaaaccgtgcaggctaggatcttggctttgaatg  13075900                                               <------MYB46(1)                                               <------MYB83                      <---------ZAT18         --------->MYB59                      --------->ZAT18         <---------MYB46(3)                     <------ZmHOX2a(1)        --------->MYB55(2)                     ====================HOX2a_HOX2a                  <------ZmHOX2a(1)           --------->MYB46(2)            --------->TGA1a                   --------->MYB111(1)            =========================bZIP_DOF --------->MYB111(2)            --------->ANAC58                 --------->ALFIN1            --------->ANAC58            ---------->DOF2         ================================HOX2a_HOX2a         ------>ZmHOX2a(1)             <---------ATHB12                         ------>ZmHOX2a(2)        --------->TOE2(3) <----------DOF2 <---------TOE2(3)          <---------AHL20(2) ===============HOX2a_HOX2a      --------->At4g35610                --------->AHL20(2) ===============HOX2a_HOX2a     --------->ARR11(3)               <---------AHL20(2) =====================bZIP_DOF  <---------ARR11(3)               --------->AHL20(2) --------->WRI1   =======================HOX2a_HOX2a    --------->YAB1        <---------ARR11(3) -------->YAB1 <-----------RAV1(2)------>ZmHOX2a(2)  --------->WOX13(1)       --------->ARR11(3)   catcatacttcctcaagtcaggaggacactttgtgatctcaataaaggtgggtagcaatcgaaacatttatttaatccatgatctctcaagagagaaaga  13076000                                                       --------->At4g35610                                                       <---------At4g35610                                                       --------->ZAT2 <---------HSFB2a(2)                                                       <---------ZAT2 --------->HSFB2a(2)                                                      ----------->RAV1(1)                                                     --------->HSFB2a(2)                                                     <-----------RAV1(2)                           --------->ANAC46          <---------HSFB2a(2)    <---------ZAT14      <---                           --------->ANAC58  <---------ALFIN1--------->At4g35610       --------->HSFC1(2)                           --------->ANAC58 <---------ZAT14  --------->ZAT2 --------->ZAT14--------->REM1(1)  <---------ZAT18   <---------ICU4        --------->ANAC46  --------->GLK1(2)          <---------HSFC1(2)   ttagtgaacatgtattgtctcatttttgcaggcaaactgtatcgactccaccgttccagcagaagctgtgttccagactgaagtgaagaagcttcaacag  13076100  Previous    Next  AGI:  At4g25630.1    Description:  FIB2 (FIBRILLARIN 2). Identical to rRNA 2'-O-methyltransferase fibrillarin 2 (FIB2) [Arabidopsis Thaliana] (GB:Q94AH9;GB:Q9SZZ1); similar to FIB1 (FIBRILLARIN 1) [Arabidopsis thaliana] (TAIR:AT5G52470.1); similar to tobacco fibrillarin homolog [Nicotiana tabacum] (GB:BAE91898.1); contains InterPro domain Fibrillarin; (InterPro:IPR000692) Range:  from: 13074142    to: 13076438    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g25631.1    Description:  U60.2F; snoRNA Range:  from: 13075572    to: 13075644    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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