Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <---------ANAC58                                                              <---------ANAC58                                                              <---------ANAC46                                                             --------->ATERF1(1)                                                             <------NtERF2                                                             <-----------------------TaNAC69(2)                                                            <---------ERF1                                                            <---------DEAR4(2)                                                            <---------ATERF1(1)                                                            <---------RRTF1(1)                                                            <---------ORA47(2)                                                            ------>NtERF2                                                            <---------RAP2.3(1)                                                           <---------RAP2.3(3)                                                           --------->DEAR3(1)                                                           <---------RAP2.3(2)                     <---------MYB52(1)                   --------->ATERF1(1)                    <-------GAMYB                         <------NtERF2                   <---------MYB46(3)                     --------->RAP2.3(1)                  <---------DEAR3(1)                      <---------ABI4(1)                ------>NtERF2                            <---------DEAR4(2)               --------->DEAR3(1)                        <---------ATERF1(1)               ----------->HVH21                         <---------RAP2.3(1)            --------->TOE1(2)                          <---------At4g35610            ----------->HVH21                          --------->ATERF1(1)<---------bZIP60(1)            --------->DEAR3(1)                      --------->ATERF1(1)   --------->ETT(2)            --------->TOE2(2)                     <---------ANAC58       <------NtERF2           --------->DEAR3(2)                  <---------DEAR3(1)      --------->ALFIN1           --------->MYB46(3)            --------->ARR14(2)<---------DEAR3(1)          ------->TEIL               --------->At4g35610<---------DEAR3(1)--------->bZIP60(1)------->GAMYB      --------->TOE1(3)              <---------LBD16<------NtERF2<---------REM1(2)      <---------YAB1     ----------->RAV1(2)           ---------->CDC5<---------ANAC46 <---------At5g28300<--------HAHB4    ------->TEIL------------>AtMYB77 <---------At4g35610<---------RAP2.3(2)       <---------YAB1  ---    --------->MYB52(1)             <-----------RAV1(2) --------->At4g35610<---------ETT(2)<---------- -------------->AtSPL3       >>>>>>>ZML2 <---------ARR14(2)<---------ANAC46  --------->ZAT6<---------TOE2(3) ---------------AtSPL8       --------->HSFB2a(2)  <---------ANAC58<---------DOF5.7(2) --------->YAB1 -------------->AtSPL8       <---------HSFB2a(2) <---------LBD16--------->DOF5.7(2)  <---------YAB1   tagaagtacctgaaccgacgacggttgtgttctagactcagcggagacgatggcggaagcggcggcgttcacggtgtcgacactactattattaacgctc  13069300                         --------->AHL20(2)           <----------DOF2                        <<<<<<<<<ARR2            <----------DOF2                      --------->WOX13(1)         <---------DAG2                ------->GAMYB                 <-----------GT1                         <------ZmHOX2a(1)              ------>MYB83                 ----------->GT1                          <---------TOE2(3)              ------>MYB46(1)          --------->ARR14(2)              ======================HOX2a_HOX2a             --------->MYB52(1)        <---------ARR14(2)              ------>ZmHOX2a(2)            --------->TOE1(2)       --------------->AGL15             <---------At4g35610 <---------CCA1(2) ------>NtERF2    <---------------AGL15            <---------ARR11(3) ----------->GT1 --->ZmHOX2a(1)--------->MYB46(3)  ----------------->AGL2   <---------ALFIN1     <---------MYB52(2) -GT1       --------->AtMYB61      ----------------->AGL3<-----------GT1----------->HVH21       -----   ctcatagctcaagaccaacgacgacaatcaaataacatccagatttagtaacttttctttcaccacttcttgatctcacagcaactaaggaggtaaaatc  13069400                                                                                                 ----                                                                                                 <---                                                                                                -----                  --------->MYB52(1)                                                            <----               <---------ANAC55(2)                                                           <-------               --------->ANAC46          <---------ICU4                             <---------ANAC46               --------->ANAC55(2)       --------->YAB1                             <---------ANAC58               --------->ANAC58         --------->ICU4                --------->MYB52(1)  <---------YAB1        --------->YAB1   --------->MYB52(1)     >>>>>>>>>TBF1         ---------->DOF2<----------DOF2 ---->YAB1     --------->ANAC58     --------->ICU4               --------->AHL20(2) <---------ANAC58   ataaacacaaacaaaatacgaaacgaataacgagagaaatgaataatgaagaagaaagaatgagagaataaataaaggagcaaatggcttttattatgga  13069500                                                                                                   --                                                                                                  <--                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ====                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                          <----------DOF2                        ----                                                          ===========================================                                                       <---------ARR11(3)                       <----                                                     --------->DOF5.7(2)                    <--------                                                     <---------MYB52(1)                 <---------GLK1(2)       <----------DOF2                              <-------GAMYB                       <---------ARR11(3) ----->CCA1(2)                                     <---------MYB46(3)                   --------->ARR11(3) ------GLK1(1)                                     --------->MYB52(2)               --------->ANAC58 ---->ARR14(2)             ------>ZmHOX2a(1)     <---------MYB52(1)  <---------YAB1 --------->ANAC46 -----ARR14(2)     <<<<<<<<<TBF1           ----------->HVH21  <---------At5g28300   --------->O2<---- --TOE2(3) <------------------------ANAC81<-----------HVH21  <-----------GT1        --------->ANAC58   tatgagccgcttcttctattcttcttctcctctctctctctctctgtcaccggtcgttatcttttacagttttcattcaatttcccacgagattttgcca  13069600      <---------ICU4      --------->ATHB51     <---------YAB1     --------->ICU4   <---------ICU4   --------->YAB1  <---------YAB1  --------->ICU4 ------->TGA2(2) ---------TGA1                 <----------DOF2                                               <------- ----->bZIP60(2)           ------->MYC2                                                 *TSS -------- ----->ANAC58              <-------MYC3                                                <---------ICU4 ------bZIP60(1)           <-------PIF5                                                --------->YAB1 ----->bZIP60(1)           ------->MYC3                                               <---------YAB1 =========================================bZIP_DOF                                  <--------HAHB4 ------TGA1a               <-------MYC2                                --------->AHL20(1)   --------- ----->TGA1a              --------->ANAC58                             --------->AHL20(2) --------->YAB1 ----->ANAC55(2)          --------->ANAC58                             <---------AHL20(1)<---------YAB1 ------O2                 --------->ANAC46                             <---------AHL20(2)--------->ICU4 ----->O2  <-----------GT1<---------ALFIN1                 --------->ATHB51         <---------ICU4 ------ANAC55(2)        <---------ALFIN1                  <---------YAB1            --------->YAB1 ----->ANAC58          --------->MYB46(3)        <---------AHL20(2) --------->AHL20(2)--------->ICU4 ----->ANAC46         --------->DEAR3(2)     --------->AHL20(2) <---------ZAT6     <---------YAB1 ======bZIP_DOF      --------->PCF2         <---------AHL20(2)  ----------->GT1  --------->YAB1 -------bZIP910(1)   <---------TCP15(1)  --------->AHL20(1)--------->YAB1    <---------YAB1 <-------- ---GT1   ----------->HVH21------->PIF5  <---------ARR11(3)-------->ATHB1   <---------AHL20(2) -------STF1         <---------TCP20   ------->TEIL       --------->ICU4    --------->AHL20(2)<------   cgtcatcataatttgacggtttggacccacgcgcttccatgtatatattatttattcgctattattgtgttaaaatattaaaattatcattatgattatt  13069700                <----------ID1              --------->ANAC58              --------->ANAC58      --------->ATHB51      --------->ATHB12      <--------ATHB1     --------->AHL20(2)     <---------YAB1     <---------ATHB51     --------->ICU4     <---------AHL20(2)                                     --------->AHL20(2)   --------->YAB1                                           <-----------TBP --ICU4<------------CBF----------->GT1                --------->ANAC58                              < ->ATHB12     ------------------------>ANAC81         --------->ANAC58                          <---- >ICU4-------->HAHB4 ---------->DOF2      --------->DAG2  <-----------TBP      XXXXXXXXXXXXXXXXXXX>MIR158A -YAB1<---------ICU4XXXXXXXXXXXXXXXXXXX>MIR156H     --------->MYB52(1)        ------------>CBF <----- ------CBF  ---------->DOF2              ---------->DOF2  <---------CCA1(2) --------->ZAT18    <-----   gctaaaaataattggaaaggaacaaaagaaaaaaaacacttaaaaaagggagagtaacgcatatatataagtgatgagtccccaatgcagacaaatggct  13069800                                                                                                   <-                                                                                                 ----                                     <---------AHL20(2)                                         -----        ---------->DOF2        <---------ANAC46                                              <------- ----------DOF2           <---------ANAC58--------->AHL20(1)                                 <------- ------DOF2               <---------ANAC58--------->AHL20(2)                                 <------- ----ANAC58           <---------WOX13(1)  <---------AHL20(2)                          <---------YAB1 ----ANAC58         --------->ATHB12 --------->AHL20(2)                               <---------MYB52(1)   ttctttttttcaaaggcaaaattgattggagtgacttaaaaaaataaaataaacttcaagaaaacatgtttataccaagattaccctcgttattgtcgtg  13069900                                    <---------HSFB2a(2)                                    --------->HSFB2a(2)                                   <---------ANAC46                                  --------->ATERF1(1)                                 <-----------HVH21                                <---------O2                                   --------->At4g35610 --                                <---------DEAR3(1)                             <---------At4g35610 <-                                <---------ANAC58                               ------>NtERF2     <---                                <---------ANAC46                              --------->RAP2.3(2)<---                                <---------ANAC58                              --------->DEAR3(1) <---                                --------->bZIP60(1)                          <------NtERF2    <------                                <---------bZIP60(2)                          --------->ORA47(2)  <---                                <---------bZIP60(1)                          --------->RAP2.3(1) <---                               <------NtERF2                      <---------TOE2(3)          <-------GAMYB --------ICU4                 <---------ATERF1(1)                 <---------YAB1            <-------- ----->At5g28300             <---------DEAR3(1)                   <---------TOE1(3)         <-------- ------>GT1                 <---------ANAC58                 <----------DOF2 --------->ATERF1(1)----- --ANAC58         <---------ATHB12<------NtERF2        <---------ANAC46      --------->DEAR4(2) <---- --ANAC58   --------->ANAC58<---------ANAC58           <---------ANAC58     <---------RAP2.3(1)<----- --ANAC46   --------->ANAC58<---------ANAC46           <---------ANAC58    --------->ANAC46 <--------   gtaattacaggggtatgccactcagtaatggctggcgtcgcgaaactcgtgagcattgcgagtcttttaagataaatgcgccgctgatttcattccgttg  13070000           <------ZmHOX2a(2)          <---------GLK1(2)          --------->AGP1          <---------ARR14(2)          --------->ARR11(3)          <---------ARR11(3)  <---------ANAC58  <---------ANAC58  <---------ANAC46 <------NtERF2 ------->ALFIN1 --------DEAR3(1) ---MYB83 --------->ARR14(2) ------ANAC46 ------ANAC58 ---MYB52(1) ------ANAC58       <---------ANAC46 ---MYB46(1)------>ZmHOX2a(2) -ANAC58 <---------GLK1(1)                                 --------->YAB1        <---------AtMYB61 -ANAC46 --------->GLK1(1)                              <----------DOF2          <---------TOE1(3) ---->MYB55(2) --------->O2                      --------->ATHB12                <---------TOE2(3) -----MYB46(3) <---------O2                      <---------AHL20(2)      <---------ICU4          <--- ----MYB55(1) ------>ZmHOX2a(1)                 --------->AHL20(2)       --------->ATHB12        ---- -ANAC58----------->ARR10--------->TOE2(3)      <---------AHL20(2)      <---------YAB1          -----   ggtggcgagtgagatcctcgtgacttacattagtttttttctctaacttatttattagctttcatatcaacatagttattgctaaggtcgggtttggaat  13070100                                                               ------->MYC3   --------------->AGL15                                       <-------MYC3   <---------------AGL15                                   <---------ZAT14      <---------CCA1(2)   <----------DOF2             --------->RAP2.6(3)       --------->ZAT14    --------->O2  <-----------------AGL3      --------->MYB52(1)         <---------ZAT18    --------->ANAC58       <-  <-----------------AGL2<---------AHL20(2)         <---------ANAC58         --------->ANAC58       -- ------ICU4             --------->AHL20(2)         <---------AtLEC2         <---------O2      <------ ----->ATHB12       --------->AHL20(2)             <---------ANAC58 ---------->DOF2         <-------- ---->ICU4          <---------AHL20(2)--------->ICU4    <---------ANAC46    <---------ANAC55(2)   <--   gatttcttttaatggtttttttttaatttataaaacggcaatgtttctattttgcatggtgtacacatgtgaaagaacacgtctatctactacaatcaag  13070200  Previous    Next  AGI:  At4g25620.1    Description:  hydroxyproline-rich glycoprotein family protein. similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT5G52430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49451.1) Range:  from: 13067195    to: 13069688    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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