Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <------ZmHOX2a(1)   --------                                                                   --------->ZAT14           <-------         ------>ZmHOX2a(2)                                         <---------ZAT14          ---------       <---------ARR11(3)                                       <---------ANAC55(2)    --------->YAB1       --------->ARR11(3)                        ---------->DOF2<---------ANAC46   <---------AHL20(2)     <---------YAB1                            --------->YAB1  --------->MYB59    --------->AHL20(2)  --------->GLK1(2)                      --------->YAB1--------->MYB59 ----------->GT1 ----------->GT1  --------->ICU4                         ----------->GT1       <-----------------------TaNAC69(2)   agagattatgatctaagcccaaaatttcatagtttttaaaaaatggtaatcaaaagttaagtagttaagtatacaggaaaaattttaaattgtaatattt  13062900                                              <------MYB83                                              <------MYB46(1)                       --------->ICU4                                           <---------MYB52(1)                       --------->AHL20(2)     --------->YAB1                    <---------------AGL15                   ----------->GT1  ------>ZmHOX2a(1)   <---------LBD16 --------->ANAC46                   --------->At4g35610 ->AHL20(1)    <---------RVE1(1)<---------AHL20(2)                     --------->YAB1 --AHL20(1)    <---------CCA1(1)--------->AHL20(2)                --------->AHL20(2)<---------AHL20(2) >ICU4<---------AHL20(2)----------->GT1--------------->AGL15----------->GT1  ---------->DOF2        <   tttcctataaaaattggatatttatctggagaaaataaatactccatttggttccatcaattttgaaaaaaaatcagaagaaagaaaaaattagaaattg  13063000                             <---------HSFB2a(2)                            ------>ZmHOX2a(2)                           <------ZmHOX2a(2)                           --------->CCA1(2)                          <---------AGP1                          --------->ARR14(2)                          <---------ARR14(2)                          --------->AGP1                          --------->ARR11(3)                     ------>MYB83                     ------>MYB46(1)                     -------->P                    ----------->RAV1(1)              --------->TOE1(1)              --------->TOE2(1)             --------->At4g35610           --------->YAB1 <---------ARR11(3)          <---------YAB1  <-----------ARR10          <---------YAB1          <---------ATHB12--------->ARR14(3)       <---------ICU4        ------>ZmHOX2a(1) <---------ARR14(3)      --------->ICU4                       --------->YAB1        ==========================HOX2a_HOX2a     <---------YAB1          <---------ARR11(3)        ===========================HOX2a_HOX2a  --------->YAB1           <---------ATHB12 --------->MYB52(1) -----------GT1   --------->MYB46(3)          ------->TEIL <---------AtLEC2  <----------DOF2 ------->GAMYB   tatcactctcctatcatcggaccaacaagatctagacaattgttcatgaatcataatttttgtatgtctatcccaataactttcttcaaacataacagtc  13063100                                            ---------->DOF2                                         --------->YAB1                                   <---------TOE2(3)                                 ---------->DOF2                                 --------->MYB52(1)                   <---------TOE2(3) <------ZmHOX2a(1)      <---------ARR11(3)    <---------AHL20(2)      --------->ARR11(3)    --------->AHL20(2)          --------->DAG2      --------->AHL20(1)    --------->AHL20(1)         ---------->DOF2       <---------YAB1      <---------AHL20(1)    <---------AHL20(1)----------->GT1     <----------DOF2     <---------CCA1(2)   --------->YAB1<---------WOX13(1)      <-----------GT1                      <   tattctaatatcttacatgttaagaaataataaaataaaggattgataaagaaaaaaaaaagttttttctttcttagttatttttaaaacaaaaatacaa  13063200                                                                             <---------YAB1                                                        <---------ANAC58   --------->YAB1 --------->LBD16                                                        <---------ANAC58 <----------DOF2 --------->HSFB2a(2)                                                 <---------MYB46(3)      *TSS<---------AHL20(2)  <--- -----------GT1         <---------AHL20(2)      <--------P   --------------->AtSPL3      <---------HSFB2a(2)   atttactgatcaaatatttgctggatttttttgtgatttgagcctcaagggttgttttgtttgcccgtactaggcctttataatttttcttccagagctc  13063300                                                                                                 <---                    --------->LBD16                                                       <----------DOF2          ------>ZmHOX2a(1)                               <-----------HVH21            ------>NtERF2         <---------ALFIN1                                <---------ANAC58             --------->DEAR3(1)       ------>ZmHOX2a(1)                          <---------DAG2    <---------DAG2   <------NtERF2      <---------ALFIN1                            <----------DOF2   <----------DOF2<---------DEAR3(1)    ------>NtERF2  --------->ANAC46    <-----------GT1   <---------ANAC58         <---------LBD16<--- -------DOF2 ------>ZmHOX2a(1)       <-----------GT1   <-----------GT1  --------------------->WRI1   ttttgcctcctcctcctctctccgaaattttctctcatttttctctcttctccttttttgcgtcccatcactttctctgattttctcggcgactttcttc  13063400                             ------>ZmHOX2a(2)                    <---------ARR14(2)                          <------ZmHOX2a(1)                       --------->ARR14(2)                         <---------HSFB2a(1)                 ------>NtERF2                         <---------HSFC1(2)                 --------->DEAR3(1)                      -                         --------->HSFC1(2)                 --------->ANAC46                        <                    <-----------RAV1(2)              =====================HOX2a_HOX2a            ----                   --------->LBD16                   ------>ZmHOX2a(1)                         ------          --------->At4g35610===============================HOX2a_HOX2a<---------MYB52(1)      <-----          ==========================HOX2a_HOX2a      ======================HOX2a_HOX2a         <-----          ------>ZmHOX2a(1)  ============================HOX2a_HOX2a------>ZmHOX2a(2)          <-----     <---------ZAT2<---------LBD16                ========================HOX2a_HOX2a          <-----    --------->ANAC58--------->HSFB2a(2)           =========================HOX2a_HOX2a        <------    --------->ANAC58<---------HSFB2a(2)           ------>ZmHOX2a(1)<------ZmHOX2a(2)      <---------- ------ANAC58  --------->ARR14(2)                --------------------->WRI1            <-----------GT1 ------ANAC58  <---------ARR14(2)    <---------GLK1(2)   <-----------GT1 <---------At5g28300  <------   cgtcccaagctcctctgaatccccagaaggatcgctctcgattcttctcttcctcctattctccgcccgatctgttactgtttttttttttactggtacg  13063500         --------->MYB46(3)        -------->P ------>ZmHOX2a(2) -------->At4g35610 ---------At4g35610 ------->HVH21 --->ANAC55(2) ----ANAC58 ----ANAC55(2) ----ANAC46 ----ANAC58                                                                     --------->ATHB12 -----------------TaNAC69(2)                                                   <---------AHL20(2)   - -----AtSPL3                                                              <---------MYB52(1)        < -TEIL <-----------GT1                                            --------->ANAC46              -----   tgatcggactaaccattctcttctcatgaacacacactaaatcgatttgaattcattccttcgtctatacatcactggtatttgattagatttcaaaccg  13063600                                       <---------ANAC58                                       <---------ANAC58                                      <------NtERF2                                  <---------bZIP60(2)                                  <------MYB83                                  <------MYB46(1)                                  <---------ANAC58                                  <---------ANAC58                                 <---------AtMYB61                                 --------->MYB46(2)                                 --------->MYB111(2)                                 --------->MYB111(1)                                 --------->MYB55(2)                                 --------->MYB59                                 --------->MYB52(2)                                   --------->ANAC58      <---------YAB1            <---------MYB55(1)             --------->At4g35610    --------->ANAC58 -------->ARR14(2)             <---------MYB52(1)              <---------At4g35610    --------->ANAC46 ---------ARR14(2)            <-----------HVH21     <------ZmHOX2a(1)                ---------->ID1 ---->LBD16             <-----------GT1<---------ANAC46   --------->MYB59           <-----------GT1   cgaatactatgatttcaattccgatttttctctgttaggtggcttagtcatggaggaaattaggcatctgtctgtgttagtgattttgacgctatttgaa  13063700                                   --------->GLK1(2)                                  <---------ARR14(2)                       <---------ANAC58    <---------ANAC46             --------->AHL20(2)  <---------HSFC1(2)             <---------AHL20(2)  <---------HSFB2a(1)           <---------WOX13(1)   ----------->ARR10                                        <-----------RAV1(1) <---------ARR14(2)    <---------ANAC46  --------->ZAT14<----------DOF2        <---------ANAC46 --------->ARR14(2)    <---------ANAC58  <-------TEIL <-------TEIL <------ZmHOX2a(1)    ------->TEIL   tcgaatactgttgatttatatagttgcttaggggaagaatcggttcagtatataggtgctttgtttataggaatttgtgttttgtgaatgtatgttgcag  13063800  Previous    Next  AGI:  At4g25610.1    Description:  zinc finger (C2H2 type) family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO49440.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 13063273    to: 13067237    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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