Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------ALFIN1                                  <---------ALFIN1                                  ----------->RAV1(1)                                  <----------DOF2                                 <---------MYB55(2)                                    <---------DAG2                                 --------->MYB46(3)                               ------>MYB46(1)                                ------>MYB83                                      ------>MYB83                              <---------ALFIN1                                 --------->MYB46(3)                              --------->AtMYB61                              --------->MYB52(1) <------------CBF             --------->DEAR3(1)                           <---------MYB46(2) ------- --------YAB1                --------->MYB46(3)                --------->TOE1(3)------->GAMYB ------- ->ZmHOX2a(1)      --------------------->WRI1                  --------->TOE2(3)--------->AtMYB61  <- --->TOE2(3)  ------>ZmHOX2a(2) ------>MYB46(1)   <----------DOF2 --------->AHL20(2)  <---------DAG2   taatattggtctctgatctgtatttgtgatcaccacccacacattgtgttttcttttttatcaaaccttaaaattcgcctaaccatcccctttttcaagc  13060300                                 <---------ZAT14                               --------->ZAT14        --------------->AGL15  <---------ZAT14        <---------------AGL15  --------->REM1(2)                                <---------DAG2       =========================================================================================MADS_MADS       <-----------------AGL3  --------->ZAT18                                  --------------->AGL15       ----------------->AGL2  <---------ZAT18    <---------ATHB12              <---------------AGL15 -->ANAC58                   <---------------AtSPL8                             <----------DOF2 -->ANAC58        --------->WOX13(1)--------->ANAC46                <---------AHL20(2)   <---------AtLEC2 ---------DOF2<-----------GT1--------------->AtSPL8    --------->YAB1        <-----------GT1    -----   actttcttctctatttttagcaatctatatgtgtgtacacatcatccatccattcattcatacattctattttttttttttacttttttttgcatgaata  13060400                              <---------MYB52(1)                             <----------DOF2   <---------MYB52(1)                            <---------ANAC58 <---------ANAC58                            <---------ANAC58 <---------ANAC46                            <---------ANAC46 <---------ANAC58                       <---------bZIP60(2)----------->HVH21                       --------->O2  <---------ZAT18                       <---------O2  --------->ZAT18                    <---------RAP2.6(2) --------->O2                                    -------------               <---------ANAC58    <---------ZAT18                         --------->YAB1      ----------->GT1------>NtERF2<---------ZAT6   <---------ANAC58  <---------ICU4    -------------- ------>GT1    <---------ANAC58 --------->MYB52(2) <---------ANAC58 <---------ATHB12---------->ID1   ctaaaatatggcaaatcgcttggcgacttggcgttagtgtccacttgacgtttgcttacacattgatcaaatcattttcatattttgtctccattttttg  13060500                                                                <--------P                                                     <---------AHL20(2)                                                   <---------AHL20(2)                                                  --------->AHL20(1)                                                <---------AHL20(1)                                                --------->AHL20(1)        --------->YAB1     --------->YAB1      --------->AHL20(2) -->AGL15                 <---------YAB1----------->GT1<---------AHL20(2)                           < --->AGL3      <----------ID1      --------->LBD16<---------AHL20(1)                              <--   aatgcataaatgaaaatgagccaaaacgatgatactccgaaaatgaaaaatatatatttttttggggtagttttgaaaatttggcatttttctaagttaa  13060600                                                        --------->HSFB2a(2)                                                  --------->ANAC58                                                  --------->ANAC46                                                  --------->ANAC58                                                <---------DOF5.7(2)             <---------HSFC1(2)               --------->DOF5.7(2)   *TSS          ---------->DOF2                --------->O2   <---------HSFB2a(2)     ---------->DOF2                     <---------bZIP60(1)  --------->ARR11(3) --------->YAB1                          <---------O2------->TEIL<----------DOF2 ---------YAB1        <------ZmHOX2a(1)  --------->bZIP60(1)  <---------ARR11(3)       <---------REM1(1) --------DOF2--------->HSFC1(2)       --------->ANAC46 <---------LBD16     ------>ZmHOX2a(1)   ctttgataaaagaaaagcttcgaaggacacaacttactaaacgacgtcgttaacgcatcgggaacatctttctgttcctcgtttcagcgatgtagcagta  13060700                                    --------->HSFC1(2)                                    <---------HSFB2a(1)                                    <---------HSFC1(2)                                    --------->HSFB2a(1)                                   ------->TEIL                                   --------->ARR14(2)                                   <---------ARR14(2)                                   --------->GLK1(2)                                   <---------ARR11(1)                                   <-----------ARR10                                  <---------ARR14(1)--------->ATHB12          --------->ALFIN1        <---------GLK1(2) <---------ICU4        <---------ANAC46          <---------CCA1(2)<---------YAB1                               -----        <---------ANAC58      --------->At4g35610  --------->ICU4                          --------->ALFIN1        <---------ANAC58  --------->TOE2(3)      <---------At4g35610                     --------->LBD16      --------->ZAT14<---------ANAC58           <---------YAB1                         <---------LBD16      <---------ZAT14<---------ANAC46     ------>ZmHOX2a(1)                    <----------DOF2  <----     --------->ALFIN1<---------ANAC58    --------->TOE2(3)                  ------>ZmHOX2a(1)   <----   gtacccagtggagtggagcaatggcttgccttagccgaatcttccttattctgatgattactatgtcttcttcgtctcctcctttctgttccggtggaag  13060800                                       --------->AtMYB61                                       <---------MYB111(1)                                       <------------AtMYB15                                       <---------MYB111(2)                                       <---------MYB46(2)                                       --------->MYB46(3)                                       <---------MYB55(2)                                     ------>MYB46(1)                                     ------>MYB83                                    <---------ALFIN1                                   <---------MYB111(2)                                   <---------MYB55(2)                                   --------->MYB46(3)                                   --------->DEAR3(1)                                  --------->ANAC58                                  --------->ANAC58                                <-----------GT1                             <---------ICU4                            --------->ICU4                            <---------YAB1    ----------->HVH21                          -------->ATHB1     <-----------HVH21                          --------->YAB1 ------>MYB46(1)                                       ------                          <---------ICU4 --------->MYB52(1)                                    <-----                          <--------HAHB4--------->MYB55(1)                                    <------ZmHOX2a(1) ------>GT1              <---------ATHB12-------->P                                         --------- --MYB83                 --------->ICU4<---------MYB59                      ------->TEIL   <---------LBD16 --MYB46(1)            --------->WOX13(1)------>MYB83          <----------DOF2     <----------DOF2   gtgtatttcaaaatccctcattttgcaatcattatcacccacctacctgtgatacctggtttcttctttctagcgatgaatctagcttttaatccaggat  13060900                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                   <-                                    ---------->DOF2                                     ------>ZmHOX2a(2)                               --------->LBD16                                         <------ZmHOX2a(2)                          <---------At4g35610                                         --------->ARR14(2)        <---------DAG2    --------->ZAT2                                              <---------ARR11(3)     --------------->AGL15<---------ZAT2                                              --------->ARR11(3)     <-----------GT1      --------->At4g35610                                         <---------ARR14(2) --->ARR14(2)             --------->GLK1(1)                <---------YAB1    <---------YAB1       <-- ----ARR14(2)             <---------GLK1(1)   <---------YAB1      <-----------RAV1(2)<------ZmHOX2a(1) >LBD16 <----------DOF2 <------ZmHOX2a(1)     <---------ANAC46--------->CCA1(2)    <---------TOE2(3)<   ttgttttctactttttgcagtcggaaggagctccgagataaagaaattacgagtaagagtgatgatacacaggcgagttatgttttaggatctaaatttg  13061000         ------->MYC3         <-------MYC3         ------->MYC4         <-------MYC2         <-------MYC4         ------->MYC2        --------->O2        <--------ABF1        --------->ANAC55(2)        <---------O2        ========================bZIP_DOF        <---------ANAC55(2)        --------->TGA1a        <---------TGA1a      <---------ALFIN1      <------------OsbHLH66     <---------REM1(2)    <-----------HVH21   <---------ETT(1)   --------->ANAC58   --------->ANAC46   ----------->HVH21   --------->ANAC58  --------->MYB46(3)  --------->DEAR3(2) -------->TCP20 -------->ARR14(2)                                  <---------WOX13(1) -------->TCP16(1)                                --------->ATHB12 -------->PCF5                                   <---------YAB1                               <------ZmHOX2a(1) -------->TCP11(2)                          <-------TEIL <---------ARR14(2)       --------->ARR14(2) ---------PCF2                            <---------MYB52(1)            <---------ICU4    --------->TOE1(2) --------TCP16(2)                      <-----------RAV1(2)           --------->YAB1   <---------ZAT18 -------ZAT18           <---------AtLEC2--------->MYB59  --------->ARR11(3)   =======================HOX2a_HOX2a ---------ARR14(2)   <----------DOF2 <-----------HVH21  <---------GLK1(1)     <------ZmHOX2a(2)     -   tggacccgacacgtgttcttcaactttcatggctaccaaggtcaggtacttctgattgatatctggttctaccatcatggatcatttctgcacataggaa  13061100                                                                               <------NtERF2                                                                             --------->ETT(1)                                                                           <-----------HVH21                                                                        <---------ANAC58                                        <------MYB83               --------->LBD16                                        <------MYB46(1)           <---------ANAC46       <---------At5g28300             --------->MYB59           --------->LBD16                -----      <-----------GT1           --------->ANAC58                 <---------LBD16  <------ZmHOX2a(1) ------>TEIL                    --------->ANAC58       <----------DOF2  <---------ANAC58        <----   tgtatgttttactgcttcaaattttaggggtctgaagcaatttggtatgtatagggtctttctataccgcgggttcttgtcggaggaagagtgtgatcat  13061200  Previous    Next  AGI:  At4g25600.1    Description:  ShTK domain-containing protein. similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT3G28490.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49435.1); contains InterPro domain Prolyl 4-hydroxylase, alpha subunit; (InterPro:IPR006620); contains InterPro domain Metridin-like ShK toxin (InterPro:IPR003582) Range:  from: 13060668    to: 13062604    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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