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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                  <----------DOF2
                                            --------->GLK1(2)
                                           <---------ARR11(3)
                                           --------->ARR11(3)             <---------GLK1(2)
                                           <---------GLK1(2)             <------ZmHOX2a(1)
                                    --------->ANAC58                    <------MYB46(1)
                                    --------->ANAC58                    <------MYB83
        --------->YAB1   <----------ID1  ----------->ARR10             --------->MYB59
--ZmHOX2a(1)          ---------->DOF2    --------->ICU4               <--------P               -----
---TOE2(3)      ---------->DOF2     --------->ANAC46           <---------YAB1    <---------CCA1(2)
 
aaaacaaacaataagaaaacaaagtgaaagaacaaaaacaagcaaagattcttctttttttttttttttataggtaggaatctcaaatcttatatatact  13052200
                                                                              <---------ICU4
                                                                          --------->AHL20(2)
                                                                          <---------AHL20(2)
                                                <-----------GT1        ------>MYB46(1)
                                         --------->AHL20(2)            ------>MYB83--------->ANAC55(2)
                                         <---------AHL20(2)         --------->ANAC55(2)
              <---------AHL20(2)     --------->AHL20(2)             <---------ANAC55(2)
          <---------AHL20(2)         <---------AHL20(2)             --------->ANAC58
         <---------AHL20(2)          --------->ATHB51               --------->ANAC58           <----
         --------->AHL20(1)          <--------ATHB1            ----------->HVH21------>ZmHOX2a(1)  <
         <---------AHL20(1)          <---------ICU4   --------->ZAT2--------->ANAC55(1)      <------
         --------->AHL20(2)         <---------ATHB51 --------->AtLEC2<---------MYB111(1)     -------
------>GT1--------->AHL20(2)        <---------ATHB12 --------->ANAC46<---------MYB59        --------
 
gaaaattgctaatttattttaagttggaacattatatcaataatttaaatttatccaagcagacttttgacacctaattaatccttacatattccattat  13052300
                                                                                                <---
                                                                                           ---------
   <-----------GT1               --------->ZAT14                                          --------->AHL20(1)
-----YAB1                        <---------ZAT18                             <---------------AGL15
----------DOF2                   --------->ARR14(2)                        --------->YAB1 <---------AHL20(1)
---ICU4                          <---------ARR14(2)           <---------CCA1(2)     ----------->GT1
-->YAB1      <---------ANAC46    <---------ZAT14            --------->AHL20(2) --------->AHL20(2)
->ICU4 ------>ZmHOX2a(1)<-------TEIL  --------->YAB1    --------->AHL20(2)<---------YAB1 --------->AHL20(2)
 
gacttttctcctcactgcttatacaaatgcatacagtatactcataagaaattaacacataaattatatcccaaattttcataaaaatagaaatatatat  13052400
                                                                                <-----------TBP
                                                                           ----------->GT1
                                                                           <------MYB83
                                                                           <------MYB46(1)
                                                                          <---------AtMYB61
                                                                          --------->MYB46(2)      --
                             <------MYB83                                 <---------MYB46(3)     ---
                    --------->ANAC58                                      --------->MYB55(2)     <--
    ---------->ID1  --------->ANAC58      --------->ZAT6                 <---------MYB55(1)    -----
--------HVH21    --------->ZAT2      --------->TOE2(3)                  <---------MYB52(1)   -------
-->TBP     --------->ZAT6    <------MYB46(1)                    <-----------RAV1(1)   <-----------RAV1(1)
 
gtcatttgtcatttactctaagcaggcccatttggtcatttcttaacaccaagtatgtaggctctatctgtggacgtttggtgatatatatgttgtctca  13052500
   <-----------TBP
 <---------------AGL15
 --------------->AGL15
<-----------------AGL3
----------------->AGL3
----------------->AGL2                             ---------->DOF2
------->YAB1                                <---------At4g35610
------>MYB46(3)           <---------ANAC58  --------->At4g35610
-------ATHB12             <---------ANAC58  --------->ZAT2           --------->ANAC58       --------
---->WOX13(1)             <---------ANAC46  <---------ZAT2           --------->ANAC58      <------ZmHOX2a(1)
----->CBF  <------------CBF         <------ZmHOX2a(1)          <---------ANAC46        --------->TOE1(2)
 
atcaccatatatagtattgagacatgttttcttgtatcaggacagacagctgactaaagagaaatggcgaagacgaaatatggagagagacataggaaag  13052600
       --------->At4g35610
       <---------At4g35610         <-------TEIL                   <---------ALFIN1
     <---------WRKY38(1)        --------->At4g35610            <---------PCF5                <------
   <-----------HVH21   --------->GLK1(2) ------>ZmHOX2a(1)  <---------ANAC58      <---------ZAT2
-->DOF2----------->RAV1(2)    <------ZmHOX2a(1)             <---------ANAC58   ---------->DOF2
 
ggttatggtcacctgaagaagacgagaagctaaggagcttcatcctctcttatggccattcttgctggaccactgttcccatcaaagctggtctctcttt  13052700
                                                 <-----------RAV1(1)
                                              <---------ICU4
                                             <---------YAB1              ----------->GT1
                                           --------->YAB1          <---------YAB1
                                          <---------YAB1      <---------AHL20(2)
                                        <----------DOF2       --------->AHL20(2)              ------
      <----------DOF2               <---------WRKY38(1)      --------->AHL20(2)---------->DOF2<-----
----DOF2                            <---------WRKY12<---------MYB46(3)   <---------ZAT6    ---------
 
catcttcttctttattagtttttagtttctcaaactgagtcaactttgataattgttgttgggatttaatttgatagggttacaaaggaatgggaagagc  13052800
                                                       <XXXXXXXXXXXXXXXXXXXXMIR413
                    --------->TOE2(3)                <---------ZAT14
                    --------->TOE2(2)                <---------ZAT18
                    <---------MYB59                  --------->ZAT18
                    --------->TOE1(2)           <---------YAB1
                   --------->ANAC55(2)        --------->ATHB12
                 <-----------GT1             --------->ICU4
     <---------TOE2(3)                       <---------YAB1                   <---------ANAC58
     <---------YAB1<---------ANAC55(2)     --------->CCA1(2)                  <---------ANAC58 -----
--->At4g35610 <---------ICU4              <---------ARR14(2)           <---------ARR11(3)  <--------
----At4g35610<---------AHL20(2)           --------->ARR14(2)>>>>>>>>>TBF1--------->YAB1    <--------
-->ARR10     --------->AHL20(2)   ---------->DOF2    --------->ZAT14   --------->ARR11(3)  <--------
 
tgcagattaagatggattaattacctaagaccagggttaaagagggatatgattagtgcagaagaagaagagactatcttgacgtttcattcttccttgg  13052900
                                                                                     <---------MYB46(3)
                                                                                    <---------AtMYB61
                                                                                    --------->ALFIN1
                                                                                  <------MYB83
                          --------->ZAT6                          --------->ATHB12<------MYB46(1)
  --------->ANAC58      ------>MYB83                             --------->ICU4  --------->MYB59
  --------->ANAC58    <---------MYB46(2)       --------------->AGL15    <---------ANAC46
------>GT1            --------->AtMYB61        <---------------AGL15   <---------TOE2(3)
-ANAC58               <---------MYB59     <---------At4g35610    <---------ATHB12--------->MYB111(1)
-ANAC46    ------->TEIL ------>MYB46(1)   --------->At4g35610    <---------YAB1--------->ICU4
-ANAC58   <---------CCA1(2)            <---------At4g35610      <---------TOE2(3)--------->MYB46(2)
 
gtaacaagtaagtgtatctctaagacctaaccctattgttttagcagatgctagttatagagagactaatgatttaggtgtaattaggtggtcgcaaata  13053000
                                                                                                 ---
              <XXXXXXXXXXXXXXXXXXXXMIR858                                                        ---
          --------->LBD16                                                                        <--
         <---------LBD16                                                                    <-------TEIL
        <---------LBD16               --------->ATHB12                           <---------At4g35610
       --------->MYB52(1)      ---------->DOF2            ---------->DOF2        --------->At4g35610
 
gctaaattcttaccgggaagaacagacaatgagataaagaactattggcactctcatttgaaaaagaaatggctcaagtctcagagcttacaagatgcaa  13053100
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AGI:  At4g25560.1   
Description:  AtMYB18 (myb domain protein 18); DNA binding / transcription factor. Identical to Transcription factor LAF1 (LAF1) [Arabidopsis Thaliana] (GB:Q9M0K4;GB:Q9SUI1;GB:Q9ZTF0); similar to AtMYB19 (myb domain protein 19), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G52260.1); similar to Os04g0532800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053406.1); similar to hypothetical protein OsJ_014925 [Oryza sativa (japonica cultivar-group)] (GB:EAZ31442.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT
Range:  from: 13052564    to: 13053627    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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