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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<----------
DOF2
--------->
GLK1(2)
<---------
ARR11(3)
--------->
ARR11(3)
<---------
GLK1(2)
<---------
GLK1(2)
<------
ZmHOX2a(1)
--------->
ANAC58
<------
MYB46(1)
--------->
ANAC58
<------
MYB83
--------->
YAB1
<----------
ID1
----------->
ARR10
--------->
MYB59
--
ZmHOX2a(1)
---------->
DOF2
--------->
ICU4
<--------
P
-----
---
TOE2(3)
---------->
DOF2
--------->
ANAC46
<---------
YAB1
<---------
CCA1(2)
aaaacaaacaataagaaaacaaagtgaaagaacaaaaacaagcaaagattcttctttttttttttttttataggtaggaatctcaaatcttatatatact
13052200
<---------
ICU4
--------->
AHL20(2)
<---------
AHL20(2)
<-----------
GT1
------>
MYB46(1)
--------->
AHL20(2)
------>
MYB83
--------->
ANAC55(2)
<---------
AHL20(2)
--------->
ANAC55(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
ANAC55(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
ANAC58
<---------
AHL20(2)
--------->
ATHB51
--------->
ANAC58
<----
--------->
AHL20(1)
<--------
ATHB1
----------->
HVH21
------>
ZmHOX2a(1)
<
<---------
AHL20(1)
<---------
ICU4
--------->
ZAT2
--------->
ANAC55(1)
<------
--------->
AHL20(2)
<---------
ATHB51
--------->
AtLEC2
<---------
MYB111(1)
-------
------>
GT1
--------->
AHL20(2)
<---------
ATHB12
--------->
ANAC46
<---------
MYB59
--------
gaaaattgctaatttattttaagttggaacattatatcaataatttaaatttatccaagcagacttttgacacctaattaatccttacatattccattat
13052300
<---
---------
<-----------
GT1
--------->
ZAT14
--------->
AHL20(1)
-----
YAB1
<---------
ZAT18
<---------------
AGL15
----------
DOF2
--------->
ARR14(2)
--------->
YAB1
<---------
AHL20(1)
---
ICU4
<---------
ARR14(2)
<---------
CCA1(2)
----------->
GT1
-->
YAB1
<---------
ANAC46
<---------
ZAT14
--------->
AHL20(2)
--------->
AHL20(2)
->
ICU4
------>
ZmHOX2a(1)
<-------
TEIL
--------->
YAB1
--------->
AHL20(2)
<---------
YAB1
--------->
AHL20(2)
gacttttctcctcactgcttatacaaatgcatacagtatactcataagaaattaacacataaattatatcccaaattttcataaaaatagaaatatatat
13052400
<-----------
TBP
----------->
GT1
<------
MYB83
<------
MYB46(1)
<---------
AtMYB61
--------->
MYB46(2)
--
<------
MYB83
<---------
MYB46(3)
---
--------->
ANAC58
--------->
MYB55(2)
<--
---------->
ID1
--------->
ANAC58
--------->
ZAT6
<---------
MYB55(1)
-----
--------
HVH21
--------->
ZAT2
--------->
TOE2(3)
<---------
MYB52(1)
-------
-->
TBP
--------->
ZAT6
<------
MYB46(1)
<-----------
RAV1(1)
<-----------
RAV1(1)
gtcatttgtcatttactctaagcaggcccatttggtcatttcttaacaccaagtatgtaggctctatctgtggacgtttggtgatatatatgttgtctca
13052500
<-----------
TBP
<---------------
AGL15
--------------->
AGL15
<-----------------
AGL3
----------------->
AGL3
----------------->
AGL2
---------->
DOF2
------->
YAB1
<---------
At4g35610
------>
MYB46(3)
<---------
ANAC58
--------->
At4g35610
-------
ATHB12
<---------
ANAC58
--------->
ZAT2
--------->
ANAC58
--------
---->
WOX13(1)
<---------
ANAC46
<---------
ZAT2
--------->
ANAC58
<------
ZmHOX2a(1)
----->
CBF
<------------
CBF
<------
ZmHOX2a(1)
<---------
ANAC46
--------->
TOE1(2)
atcaccatatatagtattgagacatgttttcttgtatcaggacagacagctgactaaagagaa
atggcgaagacgaaatatggagagagacataggaaag
13052600
--------->
At4g35610
<---------
At4g35610
<-------
TEIL
<---------
ALFIN1
<---------
WRKY38(1)
--------->
At4g35610
<---------
PCF5
<------
<-----------
HVH21
--------->
GLK1(2)
------>
ZmHOX2a(1)
<---------
ANAC58
<---------
ZAT2
-->
DOF2
----------->
RAV1(2)
<------
ZmHOX2a(1)
<---------
ANAC58
---------->
DOF2
ggttatggtcacctgaagaagacgagaagctaaggagcttcatcctctcttatggccattcttgctggaccactgttcccatcaaagctg
gtctctcttt
13052700
<-----------
RAV1(1)
<---------
ICU4
<---------
YAB1
----------->
GT1
--------->
YAB1
<---------
YAB1
<---------
YAB1
<---------
AHL20(2)
<----------
DOF2
--------->
AHL20(2)
------
<----------
DOF2
<---------
WRKY38(1)
--------->
AHL20(2)
---------->
DOF2
<-----
----
DOF2
<---------
WRKY12
<---------
MYB46(3)
<---------
ZAT6
---------
catcttcttctttattagtttttagtttctcaaactgagtcaactttgataattgttgttgggatttaatttgatag
ggttacaaaggaatgggaagagc
13052800
<XXXXXXXXXXXXXXXXXXXX
MIR413
--------->
TOE2(3)
<---------
ZAT14
--------->
TOE2(2)
<---------
ZAT18
<---------
MYB59
--------->
ZAT18
--------->
TOE1(2)
<---------
YAB1
--------->
ANAC55(2)
--------->
ATHB12
<-----------
GT1
--------->
ICU4
<---------
TOE2(3)
<---------
YAB1
<---------
ANAC58
<---------
YAB1
<---------
ANAC55(2)
--------->
CCA1(2)
<---------
ANAC58
-----
--->
At4g35610
<---------
ICU4
<---------
ARR14(2)
<---------
ARR11(3)
<--------
----
At4g35610
<---------
AHL20(2)
--------->
ARR14(2)
>>>>>>>>>
TBF1
--------->
YAB1
<--------
-->
ARR10
--------->
AHL20(2)
---------->
DOF2
--------->
ZAT14
--------->
ARR11(3)
<--------
tgcagattaagatggattaattacctaagaccagggttaaagagggatatgattagtgcagaagaagaagagactatcttgacgtttcattcttccttgg
13052900
<---------
MYB46(3)
<---------
AtMYB61
--------->
ALFIN1
<------
MYB83
--------->
ZAT6
--------->
ATHB12
<------
MYB46(1)
--------->
ANAC58
------>
MYB83
--------->
ICU4
--------->
MYB59
--------->
ANAC58
<---------
MYB46(2)
--------------->
AGL15
<---------
ANAC46
------>
GT1
--------->
AtMYB61
<---------------
AGL15
<---------
TOE2(3)
-
ANAC58
<---------
MYB59
<---------
At4g35610
<---------
ATHB12
--------->
MYB111(1)
-
ANAC46
------->
TEIL
------>
MYB46(1)
--------->
At4g35610
<---------
YAB1
--------->
ICU4
-
ANAC58
<---------
CCA1(2)
<---------
At4g35610
<---------
TOE2(3)
--------->
MYB46(2)
gtaacaa
gtaagtgtatctctaagacctaaccctattgttttagcagatgctagttatagagagactaatgatttaggtgtaattag
gtggtcgcaaata
13053000
---
<XXXXXXXXXXXXXXXXXXXX
MIR858
---
--------->
LBD16
<--
<---------
LBD16
<-------
TEIL
<---------
LBD16
--------->
ATHB12
<---------
At4g35610
--------->
MYB52(1)
---------->
DOF2
---------->
DOF2
--------->
At4g35610
gctaaattcttaccgggaagaacagacaatgagataaagaactattggcactctcatttgaaaaagaaatggctcaagtctcagagcttacaagatgcaa
13053100
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AGI:
At4g25560.1
Description:
AtMYB18 (myb domain protein 18); DNA binding / transcription factor. Identical to Transcription factor LAF1 (LAF1) [Arabidopsis Thaliana] (GB:Q9M0K4;GB:Q9SUI1;GB:Q9ZTF0); similar to AtMYB19 (myb domain protein 19), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G52260.1); similar to Os04g0532800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053406.1); similar to hypothetical protein OsJ_014925 [Oryza sativa (japonica cultivar-group)] (GB:EAZ31442.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT
Range:
from: 13052564
to: 13053627
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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