Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<-----------------
AGL3
<---------
TOE2(3)
--------->
ANAC55(2)
<---------
ATHB51
----------->
GT1
--------->
ANAC58
--------->
ANAC58
<---------
ANAC55(2)
--------->
ICU4
--------->
MYB52(1)
<---------
MYB52(1)
--------->
ANAC58
--------->
ANAC58
<---------
ALFIN1
--------->
TOE2(3)
--------->
SPL7
--------->
ANAC58
--------
AtLEC2
------->
TEIL
<---------------
AGL15
<---------
YAB1
--
ARR11(3)
--------->
ANAC58
<---------
SPL7
<---------
HSFB2a(2)
-
->
ARR11(3)
--------->
ANAC58
<---------------
AtSPL8
--------->
ANAC58
-----
tgcatcgaaacac
cttgagagtgacaaaatcgaacgcatcgttaagtaacttaaatggtacgccgaaattatggaaggcaagaacggttctattgactta
13027600
<---------
DOF5.7(2)
<---------
WRKY38(1)
--------->
AHL20(2)
<---------
WRKY12
<---------
AHL20(2)
--------->
ANAC46
--------->
WRKY12
<---------
ANAC46
--------->
ANAC58
--------->
WRKY38(1)
-------->
MYB59
--------->
ANAC58
<---------
MYB59
--------->
YAB1
---->
ATHB12
<---------
REM1(2)
--------->
TOE1(2)
--------->
TOE2(3)
attgggtctaaaaactactctaaacgcctcttgtcaacgttcgaactagtccctaac
ctttgactcaaatataaatattggctacaaatagacttatagt
13027700
------>
ZmHOX2a(2)
<---------
ARR11(3)
--------->
ARR11(3)
<---------
ICU4
<---------
At4g35610
<---------
AHL20(1)
<-----------
RAV1(1)
--------->
YAB1
<----------
DOF2
--------->
ANAC58
<---------
TOE2(3)
--------->
At4g35610
----------->
GT1
----------->
GT1
<---------
GLK1(1)
<---------
At4g35610
--------->
ANAC58
<---------
ZAT6
--------->
ETT(2)
<---------
SPL7
<-----------
GT1
--------->
At4g35610
<----------
DOF2
<---
tctgcctacattggtcgtctgctttagtatatttgttaccaagtaaaatgctgctgtagagtttaatgatctctttgtctactgggtttctccaattttc
13027800
<---------
ANAC58
<---------
ANAC46
<-------
TEIL
--------->
ARR14(2)
<---------
ARR14(2)
<---------------
ANT
<
<---------
MYB52(1)
--------->
WRKY38(1)
<--
<-------
GAMYB
<---------
At4g35610
<--
------>
ZmHOX2a(2)
--------->
ATHB12
<------
<---------
MYB46(3)
<----------
DOF2
--------->
At4g35610
<------
------
YAB1
<---------
ANAC58
<-------
GAMYB
<---------
YAB1
<---------
tgatcgttgggattcgtgcaagtcgagagagtctacttggttgaaactttctgggttttgatttgagttgcccattggatttgaagttttagtcttttgt
13027900
--------->
CCA1(2)
--------->
GLK1(1)
--------
P
<---------
ARR11(3)
<---------
ZAT6
<---------
YAB1
----
MYB83
--------->
ARR11(3)
>>>>>>>>>
TAC1
<---------
At4g35610
----
MYB46(1)
--------->
ARR14(2)
<----------
DOF2
<----------
DOF2
---
MYB46(3)
<----------
DOF2
<---------
ANAC58
<---------
DAG2
<<<<<<<<<
MYB2
-----
RAV1(1)
<---------
ARR14(2)
<---------
ANAC58
<----------
DOF2
<------
MYB83
-
DOF2
<-----------
GT1
<---------
ZAT14
<---------
YAB1
---------->
ID1
<------
MYB46(1)
tggtaagttttaccctttgagatatgctcgtctgatagtatagggctttcgagtgttatgaaaaattcgccttttcgtcttctgatttggttttcatttc
13028000
--------->
YAB1
<---------
ICU4
<---------
YAB1
<---------
ATHB12
--------->
YAB1
<---------
YAB1
--------->
YAB1
--------->
ATHB12
--------->
ICU4
------>
ZmHOX2a(1)
<---------
YAB1
--------->
ARR11(3)
<----------
DOF2
--------->
ICU4
<---------
WOX13(1)
<---------
MYB52(1)
<-----
--------->
ARR11(3)
------>
ZmHOX2a(2)
--------->
ARR14(2)
<---------
YAB1
<---------
ARR11(3)
<------
ZmHOX2a(2)
<---------
ARR14(2)
--------->
GLK1(2)
<---------
At4g35610
<---------
ARR14(2)
--------->
GLK1(2)
<---------
GLK1(2)
---
--------->
At4g35610
--------->
ARR14(2)
<---------
GLK1(2)
<-----------
HVH21
<------
ZmHOX2a(1)
cttcagctaaatcttcgtaatacttggatcctgaatgattaatcat
agctagaatccgtttggctttgttatttgggtcagagattctgagaggacgctt
13028100
--------->
HSFB2a(2)
------>
ZmHOX2a(1)
<---------
HSFB2a(2)
------>
ZmHOX2a(1)
<---------
LBD16
<----
==========================
HOX2a_HOX2a
<------
--------->
At4g35610
------>
ZmHOX2a(2)
--------
<---------
At4g35610
======================
HOX2a_HOX2a
--------
--------->
WRKY18(1)
<---------
ARR14(2)
<---------
GLK1(1)
<---------
At4g35610
<--------
-----
DOF2
<----------
DOF2
--------->
ARR14(2)
<---------
ARR11(3)
--------->
At4g35610
<---------
------->
DOF2
------>
ZmHOX2a(1)
<------------
CBF
----------->
RAV1(2)
<---------
YAB1
taaagagtcaagcttttcattcctctgaatccgtccttgtattggacgtcttgatctctgtatgctctcctggagctatcgaatcgagtttctcattgac
13028200
<---------
ARR14(2)
--------->
ARR14(2)
<---------
CCA1(2)
<---------
ARR14(2)
<---------
GLK1(1)
--------->
ARR14(2)
<----------
TaMYB80
-----
WOX13(1)
----------->
GT1
--------->
GLK1(1)
---
WRKY18(1)
--------->
ZAT2
<---------
ATHB12
->
WRKY38(1)
<---------
At4g35610
------------>
CBF
<---------
ARR11(3)
->
WRKY12
--------->
At4g35610
<---------
bZIP60(1)
--------->
LBD16
-
WOX13(1)
--------->
GLK1(2)
<------
ZmHOX2a(1)
--------->
GLK1(2)
------------>
CBF
--
---
CBF
--------->
LBD16
<---------
At4g35610
--------->
YAB1
------>
NtERF2
<----------
DOF2
<---
tgatgctcttggttccgaagctgtatatatgcagaggagcagtggcatcaataatctgcatatcccgacttcgccaatgtctttctcttcgaatggcatt
13028300
<------
NtERF2
--------->
RAP2.6(2)
--------->
At4g35610
<---------
At4g35610
--------->
ZAT2
--------->
AtLEC2
<---------
ZAT2
------------>
CBF
--------->
At4g35610
------>
ZmHOX2a(2)
--------->
ZAT2
<---------
GLK1(1)
<---------
At4g35610
--------->
GLK1(1)
----------->
RAV1(1)
==============================
HOX2a_HOX2a
--------->
At4g35610
------------>
CBF
<---------
ARR11(3)
<---------
At4g35610
<<<<<<<
ZML2
<------
ZmHOX2a(2)
<---------
AGP1
<---------
ZAT2
<---------
HSFB2a(2)
<---------
ANAC46
<---------
ARR14(2)
--------->
ZAT2
--------->
HSFB2a(2)
----------->
RAV1(2)
--------->
ARR14(2)
---------->
CDC5
--------->
MYB46(3)
<----
------>
MYB83
--------->
ARR11(3)
-------->
P
--------->
At4g35610
<---------
ZAT2
------>
MYB46(1)
------->
TEIL
----------->
RAV1(1)
<---------
At4g35610
--------->
ANAC58
--------->
RAV1(2)
<---------
WOX13(1)
<---------
ALFIN1
----------->
RAV1(1)
--------->
ANAC58
--------
GT1
<---------
ATHB12
------>
ZmHOX2a(1)
--------->
TOE2(3)
<---------
MYB111(1)
<------
ZmHOX2a(1)
aacctgcctggatcaatggttcttgatggatctccttcaatgcaacacttacctcagcagcagcagcggcaactactagaacagcaagcaggacaaggtt
13028400
-------
<-----------
GT1
<---------
ARR11(3)
<---------
ARR14(2)
--------->
ARR14(2)
--------->
ARR11(3)
<---------
GLK1(2)
<---------
At4g35610
--------->
At4g35610
<---------
MYB52(1)
----------->
RAV1(1)
----------->
GT1
--------->
At4g35610
=
------------>
MYB.PH3(1)
--------->
ZAT2
<------
<---------
ATHB12
<---------
TOE2(3)
<-----------
RAV1(1)
<---------
At5g28300
----------------->
AGL1
--------->
ANAC58
--------->
ANAC58
<---------
ZAT2
<---------
At4g35610
---
TEIL
----------->
GT1
--------->
ANAC58
--------->
ANAC58
<---------
At4g35610
-
cagttccaatgagggaaaacagttattcccatgtagataagaaactgagattagaagtgaagcaagaagacttgttgcagcagcagattttacagcagtt
13028500
Previous
Next
AGI:
At4g25510.1
Description:
unknown protein
Range:
from: 13027453
to: 13028046
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version