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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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      --------->YAB1
      ----------->GT1
  --------->AHL20(2)
  <---------AHL20(1)                             <-----------GT1
  --------->AHL20(1)                         <--------HAHB4                                      ---
  <---------AHL20(2)                         <---------ICU4                                      <--
------->AHL20(2)                             --------->YAB1                                     ====
--------AHL20(2)                             -------->ATHB1                                     <---
------>AHL20(2)                              --------->AHL20(2)                                 ----
--->AHL20(2)                                 --------->ATHB51                    <---------ARR14(2)
----AHL20(2)                                <---------YAB1           <---------TOE1(2)          ----
-->AHL20(1)    <---------AHL20(2)           --------->ICU4  --------->MYB46(3)   --------->ARR14(2)
---AHL20(2)    --------->AHL20(2)           <---------ATHB51<------------MYB.PH3(2)             <---
-->AHL20(2) --------->AHL20(1)      --------->YAB1          ========================================
---AHL20(1) <---------AHL20(1) <----------DOF2 <---------YAB1        <---------TOE2(2)     ---------
 
tttaattaattgtaatatataaatatacacatttctttataacaacaattattaaacttactaacaaactcatatgtttcatcgaatccaaaacttgaca  13024200
    ------>ZmHOX2a(2)
   <------ZmHOX2a(2)
  --------->ARR11(3)
  <---------ARR11(3)
  --------->ARR14(2)
  <---------ARR14(2)
---->MYC3
-----MYC3
=======================================bZIP_DOF
------TGA1a
----->O2
----->TGA1a                                                                        >>>>>>>ZML2
------O2                                                             <---------ANAC55(2)        <---
======MYC_MYB         <---------AtLEC2                    <---------ANAC46 <-------TEIL         ----
-->HVH21    <---------ZAT6  <----------DOF2          --------->ATHB12--------->ANAC55(2)     -------
 
tgtgggatcttgagagtgttaagttgcaagactttttaaaaacttgtatgcattattcattgtgtagatgttatgtgatacatgttctagttctattaat  13024300
                      --------->GLK1(2)
         <---------ATHB12
<---------ARR11(3)    --------->ARR11(3)                                     --------->ZAT2
<---------ARR14(2)    <---------ARR11(3)                                     --------->At4g35610
--------->ARR14(2)   --------->RVE1(1)             <---------MYB52(1)  ---------->DOF2         <----
------ICU4      <---------AHL20(2)            --------->GLK1(2)     <---------HSFB2a(2)      <------
----->YAB1--------->YAB1                  --------->YAB1            --------->HSFB2a(2)      <------
-->WOX13(1)     --------->AHL20(2)    ---------->ID1          ---------->ID1 <---------At4g35610
 
cagtatattctaatcaaaattaaaaaatctaatatttgtttgtcttcataatctgttattgttttgtttttttagaaagcagcttcaattttgtttactt  13024400
       --------->YAB1                                   <---------HSFB2a(2)
      <---------YAB1                        --------->DAG2
-------RAV1(1)                   --------->ARR14(2)     --------->HSFB2a(2)
---ANAC58           >>>>>>>>>MYB98      ------>ZmHOX2a(1)                            ---------->DOF2
---ANAC58<---------YAB1 --------->ARR14(2) ---------->DOF2            ------>ZmHOX2a(1)----------->GT1
 
gttgggcttcttataatttgtttaacatataggcccaatactcctaaaaagtagacgttctcgacttctcgtccttcagacaaaataagaaagtcaaaat  13024500
                                                                                           ------>MYB46(1)
             <---------YAB1                                                                ------>MYB83
            --------->ARR11(3)                                                            --------->MYB55(1)
            <---------ARR11(3)                                                           <---------MYB111(1)
            <---------AHL20(1)               --------->YAB1                              <---------MYB59
            --------->AHL20(1)          <---------AHL20(2)                               <---------MYB46(2)
           --------->RVE1(1)            --------->AHL20(1)                         <---------------AtSPL8
           --------->CCA1(1)            --------->AHL20(2)  ------>ZmHOX2a(2)      <---------------AtSPL3
       --------->AHL20(2)          --------->AHL20(2)     --------->ARR11(3)       --------------->AtSPL8
  --------->HSFB2a(2)            ----------->GT1          <---------ARR11(3)       --------------->AtSPL3
  ----------->GT1              ---------->DOF2          <---------ATHB12        *TSS   ------->TEIL
  <---------HSFB2a(2)     ---------->DOF2   --------->AHL20(2)           <----------DOF2 <---------MYB111(2)
 
gtgttctgaaaaaaatatctttgaaactaaaaagaaaagaaaataaaataaaaatccaaatgatctctcttgccttctttatctaaatcgtacctaactc  13024600
                                                              ----------->RAV1(2)
                                                             ------>NtERF2
                                                            --------->ANAC58
                                                    --------->ANAC46
                                                    --------->O2
                           <---------ZAT2           --------->ANAC58
                      --------->ANAC46              --------->ANAC58
              <---------CCA1(2)          <---------HSFB2a(2)--------->ANAC46
             ------>MYB83  <---------At4g35610      <---------O2         <---------ICU4
             ------>MYB46(1)             --------->HSFB2a(2)--------->ANAC58      ----------->GT1
            <---------CCA1(2)    <<<<<<<<<TBF1     <---------LBD16      <---------ATHB12
        <-----------GT1------>NtERF2<<<<<<<<<TBF1 <---------ALFIN1     <---------ARR11(3)
 
tgttttcagtttcacctatctctcgacgcgagcttcttcttcttctagggcttccacgcgactacgcctgccaaaatcattctacaggtaaattgatgca  13024700
                                                                --------->DAG2
                                                          <------MYB46(1)
                                                          <------MYB83
                                                          <---------MYB46(3)
                                                          ----------->GT1
                                                         <---------AtMYB61
                                                         <---------MYB46(3)
                                                         --------->MYB55(2)
                                                         --------->MYB111(2)
                                                         <---------DEAR3(1)
                                                         --------->MYB111(1)
                                                         --------->MYB46(2)
                                                        <---------MYB55(1)
                             <---------At4g35610        <--------P
                     <---------MYB46(3)     <----------DOF2    ---------->DOF2
                   --------------------->WRI1          <-------GAMYB
   <-----------GT1<---------ANAC46------>ZmHOX2a(1)   <---------MYB46(3)
 
gtttattcactctctatatcgtcgtggttctcatctccttcttccttcttttttttttggttggtgaaaagtagaacaagagaattggtccatctcgttt  13024800
                                                                 --------->KAN4(2)
                                                                --------->KAN4(1)
                                                          <---------LBD16
                                                         <---------ANAC58
                                                         <---------ANAC46                   --------
                                                     <---------ANAC58                       <-------
                                                     <---------ANAC58                    <---------WOX13(1)
              <---------At4g35610               <-------TEIL    <---------KAN4(1)     <---------YAB1
              --------->At4g35610  --------->HSFB2a(2)   <---------ANAC58      <---------CCA1(2)   <
        ------->TEIL     <----------DOF2<---------YAB1<----------DOF2       <-----------GT1---------
 
tttataagttgaatctcatcagagccttctttgtttttctggtatgaaagattcatgctttcgtggattgttctcgttttctctatcttgtgaatgatat  13024900
    --------->MYB52(1)
  ------>ZmHOX2a(2)
  <---------MYB59
 <------ZmHOX2a(2)
<---------AGP1
--------->AGP1          <-----------RAV1(1)
<---------ARR14(2)     ------>ZmHOX2a(2)
<-----------ARR10     <------ZmHOX2a(2)
--------->ARR11(3)   <---------AGP1
<---------ARR11(3)   <---------ARR14(2)                                                --------->ZAT2
--------->ARR14(2)   --------->ARR11(3)                                        --------->ATHB12
->ARR11(3)           --------->AGP1                                  <---------TOE1(2) <---------ZAT2
--ARR11(3)           --------->ARR14(2)       <---------YAB1         <---------TOE2(2) --------->At4g35610
---------CCA1(2)   ----------->ARR10 <----------DOF2                ------>ZmHOX2a(1)  <---------At4g35610
>YAB1 --------->ZAT6 <---------ARR11(3) <---------YAB1      <---------ZAT14<-----------GT1
 
tcagatctaactgtagttagattagatctgttgcattgtacttttgattctaatactgtctagttcagttcctagatttaactgatttggagctcgaata  13025000
                                               --------->ZAT18
                                               <---------ZAT18
                  <---------At5g28300        <---------RAP2.3(3)
                 <-----------GT1          --------->ALFIN1
            ------>ZmHOX2a(1)            <-----------HVH21   ----------->GT1
           <---------MYB59              <---------ZAT6       <---------ZAT6       ----------->HVH21
 
gatgagtttcaagtcctaatttactgcaaaacaattcgatttagtgtgagggctctagtttttagtgttaaaagttttcatcttggtgacaaattagttg  13025100
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AGI:  At4g25500.1   
Description:  ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA binding. Identical to Arginine/serine-rich-splicing factor RSP40 (RSP40) [Arabidopsis Thaliana] (GB:P92965;GB:Q96333); similar to ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41), RNA binding [Arabidopsis thaliana] (TAIR:AT5G52040.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN82624.1); similar to splicing factor-like protein [Vitis riparia] (GB:AAS00039.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677)
Range:  from: 13024581    to: 13027450    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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