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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
--------->
YAB1
----------->
GT1
--------->
AHL20(2)
<---------
AHL20(1)
<-----------
GT1
--------->
AHL20(1)
<--------
HAHB4
---
<---------
AHL20(2)
<---------
ICU4
<--
------->
AHL20(2)
--------->
YAB1
====
--------
AHL20(2)
-------->
ATHB1
<---
------>
AHL20(2)
--------->
AHL20(2)
----
--->
AHL20(2)
--------->
ATHB51
<---------
ARR14(2)
----
AHL20(2)
<---------
YAB1
<---------
TOE1(2)
----
-->
AHL20(1)
<---------
AHL20(2)
--------->
ICU4
--------->
MYB46(3)
--------->
ARR14(2)
---
AHL20(2)
--------->
AHL20(2)
<---------
ATHB51
<------------
MYB.PH3(2)
<---
-->
AHL20(2)
--------->
AHL20(1)
--------->
YAB1
========================================
---
AHL20(1)
<---------
AHL20(1)
<----------
DOF2
<---------
YAB1
<---------
TOE2(2)
---------
tttaattaattgtaatatataaatatacacatttctttataacaacaattattaaacttactaacaaactcatatgtttcatcgaatccaaaacttgaca
13024200
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ARR11(3)
<---------
ARR11(3)
--------->
ARR14(2)
<---------
ARR14(2)
---->
MYC3
-----
MYC3
=======================================
bZIP_DOF
------
TGA1a
----->
O2
----->
TGA1a
>>>>>>>
ZML2
------
O2
<---------
ANAC55(2)
<---
======
MYC_MYB
<---------
AtLEC2
<---------
ANAC46
<-------
TEIL
----
-->
HVH21
<---------
ZAT6
<----------
DOF2
--------->
ATHB12
--------->
ANAC55(2)
-------
tgtgggatcttgagagtgttaagttgcaagactttttaaaaacttgtatgcattattcattgtgtagatgttatgtgatacatgttctagttctattaat
13024300
--------->
GLK1(2)
<---------
ATHB12
<---------
ARR11(3)
--------->
ARR11(3)
--------->
ZAT2
<---------
ARR14(2)
<---------
ARR11(3)
--------->
At4g35610
--------->
ARR14(2)
--------->
RVE1(1)
<---------
MYB52(1)
---------->
DOF2
<----
------
ICU4
<---------
AHL20(2)
--------->
GLK1(2)
<---------
HSFB2a(2)
<------
----->
YAB1
--------->
YAB1
--------->
YAB1
--------->
HSFB2a(2)
<------
-->
WOX13(1)
--------->
AHL20(2)
---------->
ID1
---------->
ID1
<---------
At4g35610
cagtatattctaatcaaaattaaaaaatctaatatttgtttgtcttcataatctgttattgttttgtttttttagaaagcagcttcaattttgtttactt
13024400
--------->
YAB1
<---------
HSFB2a(2)
<---------
YAB1
--------->
DAG2
-------
RAV1(1)
--------->
ARR14(2)
--------->
HSFB2a(2)
---
ANAC58
>>>>>>>>>
MYB98
------>
ZmHOX2a(1)
---------->
DOF2
---
ANAC58
<---------
YAB1
--------->
ARR14(2)
---------->
DOF2
------>
ZmHOX2a(1)
----------->
GT1
gttgggcttcttataatttgtttaacatataggcccaatactcctaaaaagtagacgttctcgacttctcgtccttcagacaaaataagaaagtcaaaat
13024500
------>
MYB46(1)
<---------
YAB1
------>
MYB83
--------->
ARR11(3)
--------->
MYB55(1)
<---------
ARR11(3)
<---------
MYB111(1)
<---------
AHL20(1)
--------->
YAB1
<---------
MYB59
--------->
AHL20(1)
<---------
AHL20(2)
<---------
MYB46(2)
--------->
RVE1(1)
--------->
AHL20(1)
<---------------
AtSPL8
--------->
CCA1(1)
--------->
AHL20(2)
------>
ZmHOX2a(2)
<---------------
AtSPL3
--------->
AHL20(2)
--------->
AHL20(2)
--------->
ARR11(3)
--------------->
AtSPL8
--------->
HSFB2a(2)
----------->
GT1
<---------
ARR11(3)
--------------->
AtSPL3
----------->
GT1
---------->
DOF2
<---------
ATHB12
*
TSS
------->
TEIL
<---------
HSFB2a(2)
---------->
DOF2
--------->
AHL20(2)
<----------
DOF2
<---------
MYB111(2)
gtgttctgaaaaaaatatctttgaaactaaaaagaaaagaaaataaaataaaaatccaaatgatctctcttgccttcttt
atctaaatcgtacctaactc
13024600
----------->
RAV1(2)
------>
NtERF2
--------->
ANAC58
--------->
ANAC46
--------->
O2
<---------
ZAT2
--------->
ANAC58
--------->
ANAC46
--------->
ANAC58
<---------
CCA1(2)
<---------
HSFB2a(2)
--------->
ANAC46
------>
MYB83
<---------
At4g35610
<---------
O2
<---------
ICU4
------>
MYB46(1)
--------->
HSFB2a(2)
--------->
ANAC58
----------->
GT1
<---------
CCA1(2)
<<<<<<<<<
TBF1
<---------
LBD16
<---------
ATHB12
<-----------
GT1
------>
NtERF2
<<<<<<<<<
TBF1
<---------
ALFIN1
<---------
ARR11(3)
tgttttcagtttcacctatctctcgacgcgagcttcttcttcttctagggcttccacgcgactacgcctgccaaaatcattctacag
gtaaattgatgca
13024700
--------->
DAG2
<------
MYB46(1)
<------
MYB83
<---------
MYB46(3)
----------->
GT1
<---------
AtMYB61
<---------
MYB46(3)
--------->
MYB55(2)
--------->
MYB111(2)
<---------
DEAR3(1)
--------->
MYB111(1)
--------->
MYB46(2)
<---------
MYB55(1)
<---------
At4g35610
<--------
P
<---------
MYB46(3)
<----------
DOF2
---------->
DOF2
--------------------->
WRI1
<-------
GAMYB
<-----------
GT1
<---------
ANAC46
------>
ZmHOX2a(1)
<---------
MYB46(3)
gtttattcactctctatatcgtcgtggttctcatctccttcttccttcttttttttttggttggtgaaaagtagaacaagagaattggtccatctcgttt
13024800
--------->
KAN4(2)
--------->
KAN4(1)
<---------
LBD16
<---------
ANAC58
<---------
ANAC46
--------
<---------
ANAC58
<-------
<---------
ANAC58
<---------
WOX13(1)
<---------
At4g35610
<-------
TEIL
<---------
KAN4(1)
<---------
YAB1
--------->
At4g35610
--------->
HSFB2a(2)
<---------
ANAC58
<---------
CCA1(2)
<
------->
TEIL
<----------
DOF2
<---------
YAB1
<----------
DOF2
<-----------
GT1
---------
tttataagttgaatctcatcagagccttctttgtttttctggtatgaaagattcatgctttcgtggattgttctcgttttctctatcttgtgaatgatat
13024900
--------->
MYB52(1)
------>
ZmHOX2a(2)
<---------
MYB59
<------
ZmHOX2a(2)
<---------
AGP1
--------->
AGP1
<-----------
RAV1(1)
<---------
ARR14(2)
------>
ZmHOX2a(2)
<-----------
ARR10
<------
ZmHOX2a(2)
--------->
ARR11(3)
<---------
AGP1
<---------
ARR11(3)
<---------
ARR14(2)
--------->
ZAT2
--------->
ARR14(2)
--------->
ARR11(3)
--------->
ATHB12
->
ARR11(3)
--------->
AGP1
<---------
TOE1(2)
<---------
ZAT2
--
ARR11(3)
--------->
ARR14(2)
<---------
YAB1
<---------
TOE2(2)
--------->
At4g35610
---------
CCA1(2)
----------->
ARR10
<----------
DOF2
------>
ZmHOX2a(1)
<---------
At4g35610
>
YAB1
--------->
ZAT6
<---------
ARR11(3)
<---------
YAB1
<---------
ZAT14
<-----------
GT1
tcagatctaactgtagttagattagatctgttgcattgtacttttgattctaatactgtctagttcagttcctagatttaactgatttggagctcgaata
13025000
--------->
ZAT18
<---------
ZAT18
<---------
At5g28300
<---------
RAP2.3(3)
<-----------
GT1
--------->
ALFIN1
------>
ZmHOX2a(1)
<-----------
HVH21
----------->
GT1
<---------
MYB59
<---------
ZAT6
<---------
ZAT6
----------->
HVH21
gatgagtttcaagtcctaatttactgcaaaacaattcgatttagtgtgagggctctagtttttagtgttaaaagttttcatcttggtgacaaattagttg
13025100
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AGI:
At4g25500.1
Description:
ATRSP35 (Arabidopsis thaliana arginine/serine-rich splicing factor 35); RNA binding. Identical to Arginine/serine-rich-splicing factor RSP40 (RSP40) [Arabidopsis Thaliana] (GB:P92965;GB:Q96333); similar to ATRSP41 (Arabidopsis thaliana arginine/serine-rich splicing factor 41), RNA binding [Arabidopsis thaliana] (TAIR:AT5G52040.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN82624.1); similar to splicing factor-like protein [Vitis riparia] (GB:AAS00039.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677)
Range:
from: 13024581
to: 13027450
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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