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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ANAC58
------>
NtERF2
<---------
ATERF1(2)
>>>>>>>>>
AtERF-1
--------->
ATERF1(2)
>>>>>>>>>
AtERF-2
>>>>>>>>>
AtERF-4
>>>>>>>>>
AtERF-5
--------->
RAP2.3(3)
--------->
RAP2.3(2)
>>>>>>>>>
AtERF-3
--------->
RAP2.6(2)
--------->
DEAR3(1)
--------->
ATERF1(1)
<---------
ARR11(3)
--------->
RAP2.3(1)
--------->
ARR14(2)
--------->
ERF1
<---------
WRKY38(1)
--------->
ARR11(3)
--------->
MYB46(3)
<---------
ARR14(2)
<---------
At4g35610
----------
DOF2
<---------
ATERF1(1)
---------
DAG2
--------->
At4g35610
----->
RAP2.6(2)
--------->
ARR14(2)
--------->
At4g35610
--->
At4g35610
<---------
ARR14(2)
<---------
At4g35610
----
At4g35610
<-------
TEIL
--------->
ANAC58
--------->
ANAC58
-->
DEAR3(1)
<---------
ARR14(2)
<---------
WRKY12
--------->
ANAC58
->
MYB46(3)
--------->
LBD16
---------->
DOF2
<---------
LBD16
-
At4g35610
--------->
WRKY38(1)
--------->
ANAC46
------>
ZmHOX2a(2)
>
At4g35610
<---------
ANAC46
--------->
ARR14(2)
<-----------
HVH21
--------->
ARR14(2)
>
ZAT2
--------->
GLK1(1)
<---------
LBD16
<------
NtERF2
<------
NtERF2
<---------
ARR14(2)
-
ZAT2
<---------
GLK1(1)
<---------
LBD16
<---------
RAP2.6(3)
<---------
YAB1
<
cgctttttggatatccttggcgcatgttgactccgggattcgtagccgccaagccgagtcagcgaagttgagacatgctgatcggccacggagggctaat
13022300
<---------
At4g35610
--------->
At4g35610
<---------
ZAT2
<-------
PIF5
------->
MYC2
------->
PIF5
------->
MYC3
<------------
OsbHLH66
<---------
ANAC46
--------->
DEAR3(1)
==============================================
bZIP_DOF
--------->
bZIP60(1)
<---------
O2
<-------
MYC3
--------->
TGA1a
===
<---------
TGA1a
------>
NtERF2
---
--------->
O2
<-------
MYC2
--------->
HSFB2a(1)
------>
MYB46(1)
<---------
bZIP60(1)
<---------
ANAC46
------>
MYB83
<---------
bZIP60(2)
<---------
At4g35610
<---------
ANAC58
--------->
ZAT14
<-
--------->
bZIP60(2)
--------->
At4g35610
------>
ZmHOX2a(1)
===================
----------->
HVH21
--------->
ZAT2
<---------
MYB46(3)
<---------
ARR14(2)
--------->
TGA1a
---
--------->
DEAR3(1)
>>>>>>>>>
AtERF-3
<---------
HSFB2a(1)
<---------
ANAC58
===================
---------
At4g35610
>>>>>>>>>
AtERF-4
---------->
DOF2
--------->
ARR14(2)
---------->
ID1
--------->
GLK1(1)
gcagcgacgtcgtgagcacgagctgccatctcagcggtttggaaagtcccgagccaaatcctggttttcttgtttggctctctcacttcagaaacccact
13022400
--------->
ANAC55(2)
--------->
ANAC46
<---------
DEAR3(2)
--------->
ANAC58
<------
NtERF2
<---------
ANAC58
<------
NtERF2
=======================================
bZIP_DOF
------>
NtERF2
--------->
GLK1(2)
<---------
ANAC58
--------->
ANAC58
--------->
HSFC1(2)
<---------
O2
<---------
HSFB2a(1)
<-----
<---------
HSFC1(2)
<---------
bZIP60(2)
--------->
ANAC58
-------
--------->
HSFB2a(1)
<---------
TGA1a
--------->
RAP2.6(3)
<------
--------->
LBD16
<-----------------------
TaNAC69(2)
<------
===============================================
MYC_MYB
--------->
SPL7
-------
------>
MYB52(1)
----------->
TGA1
<---------
HSFC1(2)
=======
--------
LBD16
----------->
HVH21
<-----------
GT1
---------
======
MYC_MYB
------>
ZmHOX2a(1)
--------->
ANAC58
--------->
MYB46(3)
<---------
O2
----->
P
<----------
DOF2
<---------
ANAC58
--------->
HSFB2a(1)
<---------
LBD16
<---------
WRKY12
===================
bZIP_DOF
<---------
ANAC58
--------->
HSFC1(2)
<---------
MYB52(1)
<---------
WRKY38(1)
taccggagtttctttgacgaactcctctgtaaattgggtgacgagtctcacgaaacttcttacggcccgccggtttcttcggacaactcgtggccaacgt
13022500
<---------
ICU4
--------->
ZAT14
--------->
YAB1
--------->
ANAC58
<---------
ZAT14
------
HVH21
--------->
ANAC58
--------->
ZAT18
-->
TGA1a
<-------
TEIL
<---------
ZAT18
---
O2
<----------
DOF2
--------->
At4g35610
--------->
ZAT14
---
TGA1a
------>
NtERF2
--------->
DAG2
--------->
YAB1
--------->
ANAC46
-->
O2
--------->
ANAC46
<---------
ICU4
<---------
WOX13(1)
--------->
ANAC58
========================
bZIP_DOF
<---------
ATHB12
--------->
ATHB12
--------->
ANAC58
>
MYB52(1)
<---------
LBD16
------>
NtERF2
---------->
DOF2
<-------
TEIL
<---------
ZAT14
--------
cggacaataatctccgccttgaggctcgtaatcggagccaaacatttcagaaaaagctgaaaatgagttcat
tgatcagagtactctgtttcaagaaact
13022600
--------->
ARR14(2)
<---------
ARR11(3)
<---------
ARR14(2)
--------->
ARR11(3)
<---------
ARR11(3)
----------->
GT1
--------->
AHL20(2)
--------->
ANAC55(2)
---------->
DOF2
--------->
DAG2
<-
<---------
TOE2(3)
<---------
AHL20(2)
<---------
ANAC58
--------->
ARR11(3)
<---------
TOE1(3)
----------->
GT1
--------->
AHL20(2)
<---------
ANAC58
<---------
CCA1(2)
--------->
DAG2
<---------
ANAC55(2)
--------->
YAB1
<---------
CCA1(2)
<---------
AHL20(2)
->
GLK1(2)
<---------------
AtSPL8
<----------
DOF2
<---------
ARR11(3)
---------->
DOF2
<--------
ggataaggtttaagtagtacgtagttactagagttctcagtctttttggattaataaaagatagtatatctgtcttggtaaagctatttatatctctctc
13022700
<---------
GLK1(2)
--
<-------
TEIL
<------
NtERF2
<-
----------->
ARR10
--------->
LBD16
--
<---------
TOE2(3)
--------->
DAG2
<------
NtERF2
<--
<----------
DOF2
*
TSS
---------->
DOF2
<------------
CBF
--------
<-----------
GT1
--------->
GLK1(2)
----------->
TBP
<-----------
TBP
<-------
---------
DOF2
<--------
P
<---------
ZAT14
<-----------
TBP
<------
ZmHOX2a(1)
----------------
ANAC81
<----------
DOF2
----------->
GT1
<------------
CBF
<---------
LBD16
---
tcttttttttcttttcaggtagattctttttcaag
tgtgtagttagtataaaaagtgagagtgagaattggtgtttatattggccggaggagagataacg
13022800
----------->
GT1
<---------------
AtSPL8
<---------
ZAT14
--------->
REM1(2)
<
--------->
ANAC58
------->
MYC2
-
--------->
ANAC58
<-------
MYC3
<---------
O2
--------->
ANAC46
------->
MYC3
<---------
bZIP60(2)
<---------
LBD16
<-------
MYC2
<---------
TGA1a
--------->
ZAT18
------->
MYC4
<---------
ANAC46
--------->
At4g35610
<-------
MYC4
<---------
ANAC58
<---------
At4g35610
--------->
ANAC55(2)
<---------
ANAC55(1)
--------->
ALFIN1
<---------
ANAC46
<---------
ANAC58
<-----------
RAV1(1)
<---------
ANAC55(2)
--------->
TGA1a
------->
GLK1(1)
--------->
O2
==========
--------
GLK1(1)
<---------
TGA1a
--------->
O2
------->
CCA1(2)
<--------
ABF1
==========
-------
ARR14(2)
<---------
O2
<---------
TOE1(2)
----------->
TGA1
->
MYB52(1)
<---------
ZAT14
----------->
HVH21
--------->
TOE1(2)
----------->
HVH21
--
DOF5.7(2)
--------->
MYB52(1)
<---------
WOX13(1)
--------->
ANAC58
<-----------
HVH21
------>
ARR14(2)
---------->
ID1
--------->
TGA1a
--------->
ANAC58
<---------
ALFIN1
--------
gatatgtggggagcacacggagtttttgtctctgtgaatgacacgtgtatagtacatagcgaagcaatcccacgatgttccactcgctgtctgacgtgtg
13022900
<------
MYB83
--------->
MYB55(2)
<---------
MYB46(3)
<--------
P
<-----
<-------
GAMYB
<--
<---------
MYB46(3)
--------->
AHL20(2)
--------->
MYB55(2)
<----------
DOF2
<---------
AtMYB61
--------->
WRKY38(1)
<----------
DOF2
<-----------
RAV1(1)
<
--------->
WRKY12
--------->
TOE1(3)
--------->
ALFIN1
<---
----------->
HVH21
--------->
TOE2(3)
<---------
ANAC58
<-----
----------
DOF2
--------------->
AGL15
<---------
ANAC58
<---------
ATERF1(1)
----->
ZmHOX2a(1)
--------->
DOF5.7(2)
<---------
AHL20(2)
<---------
ANAC58
------
==========
bZIP_DOF
<---------
ZAT14
<---------
ARR11(3)
--------->
ALFIN1
<---------
ANAC58
==========
bZIP_DOF
<-----------
GT1
<---------
DOF5.7(2)
<---------
ANAC58
<---------
ANAC58
->
ALFIN1
---------->
DOF2
--------->
ZAT14
--------->
ARR11(3)
--------->
ALFIN1
<------
MYB46(1)
tcctttgacccttgtaaagagacttttgactcttcactcgttaacctttatgagttctttaaattctatcgagtgtgtgcctgtgtggttggctggctgc
13023000
<-----
<-----
<-----------
GT1
-------
----
At4g35610
<---------
ATHB12
<------
-----
GAMYB
<---------
YAB1
<-----------
GT1
--------
---------
MYB46(3)
------>
ZmHOX2a(1)
<-----------
HVH21
<---------
ARR11(3)
--------
RAV1(1)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
CCA1(1)
-
----
ZAT2
<---------
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
--------->
ARR11(3)
<
--->
At4g35610
--------->
AHL20(2)
<---------
YAB1
--------->
YAB1
--------->
RVE1(1)
<-
tgttgttacaatcgtttttaaattcctatgaataaacaaattgtcattaattgtcacccgtctataacataatagacataaatatctctgtgaaatgata
13023100
-
<-
<-
----
----
RVE1(1)
-----
----
CCA1(1)
<----
-->
ARR11(3)
--------->
ZAT6
------
---
ARR11(3)
--------->
AHL20(1)
---------
->
YAB1
--------->
AHL20(2)
<--------
-------->
AHL20(2)
--------->
YAB1
---------
---------
AHL20(2)
<-----------
GT1
--------->
AHL20(2)
--------
AHL20(2)
------>
ZmHOX2a(1)
--------->
YAB1
---------->
DOF2
<---------
AHL20(2)
ttttaaatactcatgtagtatttgtattggaagtagatgtcctaatatttaaccaaaaataatactacaatatagaaaagcttgattttttaaaaaaatt
13023200
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AGI:
At4g25490.1
Description:
CBF1 (C-REPEAT/DRE BINDING FACTOR 1); DNA binding / transcription activator/ transcription factor. Identical to Dehydration-responsive element-binding protein 1B (DREB1B) [Arabidopsis Thaliana] (GB:P93835;GB:O65611;GB:Q5QE71); similar to CBF2 (FREEZING TOLERANCE QTL 4), DNA binding / transcription activator/ transcription factor [Arabidopsis thaliana] (TAIR:AT4G25470.1); similar to CRT/DRE binding factor 1 [Iris lactea var. chinensis] (GB:AAZ57434.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471)
Range:
from: 13021790
to: 13022735
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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