Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               --------->RRTF1(3)                             --------->DREB2C(2)                             --------->RRTF1(2)                             --------->RAP2.3(2)                             --------->RAP2.3(3)                             <---------ALFIN1                            --------->ATERF1(1)                            --------->RAP2.6(1)                            <------NtERF2                            --------->ORA47(2)                            --------->RAP2.3(1)                            --------->RRTF1(1)                            --------->ERF1                           --------->At4g35610                           ------>NtERF2                           <---------ATERF1(1)                           --------->DREB2C(1)                           <---------DEAR4(2)                           <---------DREB2C(1)                           <---------RAP2.3(1)                          --------->ANAC46                          ------->GAMYB                          --------->RAP2.3(3)                          --------->RAP2.6(2)                          --------->RAP2.3(2)                          <---------ATERF1(2)                          --------->DEAR3(1)                          --------->ATERF1(2)                         --------->ATERF1(1)                         --------->MYB46(3)                         --------->DEAR3(2)                  <---------At4g35610                  --------->At4g35610                  <---------ZAT2 <----------DOF2                 ------->TEIL--------->DEAR3(1)               ------->GAMYB--------->DEAR4(2)              --------->ANAC58  <----------DOF2              --------->ANAC46 <------NtERF2              --------->ANAC58------>NtERF2                              <---------ATERF1(1)            ------>NtERF2--------->RAP2.3(1)                      --------->ARR14(2)           --------->DEAR3(1)--------->RAP2.6(2)                  <---------ARR14(2)      <------NtERF2        --------->ANAC58 --------->ERF1 <---------GLK1(1)      --------->LBD16            <---------At4g35610        --------->ANAC58<---------At4g35610                   <---------LBD16             --------->At4g35610        --------->ANAC46--------->At4g35610                   --------->ANAC55(2)       <---------WRKY12   ------>ZmHOX2a(1)  <-----------RAV1(2)    ------>ZmHOX2a(1)<---------ANAC46          <---------WRKY38(1)   --------->LBD16--------->ZAT2<---------DAG2---------->CDC5 <---------ANAC55(2)     <-----------HVH21 ----------->RAV1(2)<-----------HVH21 <---------AtLEC2       <---------LBD16    --------->ANAC46   tcatcctgaaacgccaacgcagcttcagccgccgccttttggatgtccttagcgcaagttgattccgggattcggagtctccaagccgagtcagcgaaat  13018700                                                    >>>>>>>>>AtERF-4                                                    >>>>>>>>>AtERF-3                                                  <---------ZAT2                                                  --------->At4g35610                                            <---------ZAT2                                            --------->ZAT2                      --------->ANAC46                                       <---------ANAC46       --------->At4g35610                          ---------->DOF2   --------->At4g35610               <---------ANAC58                 --------->ANAC58   --------->bZIP60(2)       <---------At4g35610     <---------ARR14(2)                 --------->ANAC58 <---------DOF5.7(2)------>NtERF2            <---------ANAC58           ------>ZmHOX2a(2)    <------NtERF2     --------->ZAT2         --------->HSFB2a(1)     <---         --------->ARR14(2)    --------->RAP2.6(2)<---------At4g35610    <---------HSFB2a(1)     <---         <---------ARR14(2)--------->DAG2   <---------At4g35610 <---------MYB46(3)    --------->ARR14(2)   tgagacaggctgatcggccacgaagggctaaagcggcaacgtcgtgagctcgagctgccatctcagcggtttgaaatgttccgagccaaatccttgtttt  13018800                                                                                                    <                                                                               --------->ANAC46  ----                                                                               --------->ANAC58  ----                                                                               --------->ANAC58  ----                                                                      <---------O2              -----                                                                      <---------TGA1a           -----                                                                      <---------ANAC58         ------                                    --------->HSFB2a(1)               <---------ANAC58         <-----                                    --------->HSFC1(2)                <---------bZIP60(2)      ------                                    <---------HSFC1(2)               <-----------------------TaNAC69(2)                                 --------->LBD16                   ----------->TGA1--------->HSFC1(2)                               <---------LBD16                     ----------->HVH21      --------->SPL7    <------MYB83              --------->MYB52(1)                 <---------ANAC58  <---------HSFC1(2)    <------MYB46(1)           ==================================================MYC_MYB  <-----------GT1   --------->MYB59            -------->P              ------>ZmHOX2a(1)        --------->ANAC55(2)<-- ------ANAC58             ------>MYB46(1)   ------>NtERF2        <---------ANAC58  --------->HSFB2a(1) ------ANAC58             ------>MYB83     --------->DEAR3(1)   <---------MYB46(3) <---------HSFB2a(1)   cttgtttggttctctaacctcacaaacccacttaccggagtttctccgacgaactcctctgtatattgggtgacgagtctcacgaaacttcttacgaccc  13018900                    --------->ANAC46     <---------ANAC58     <---------ANAC46   --------->ANAC58     <---------ANAC58   --------->ANAC58 <---------MYB52(1) --------->ANAC58 ---------DEAR3(2)  --------->ANAC58         ----------->RAV1(2) ----->LBD16     --------->ZAT2             ------>NtERF2 -->NtERF2    <------NtERF2                --------->DEAR3(1) ----->MYB52(1)  --------->At4g35610     <---------At5g28300 ---->ANAC46  --------->At4g35610       <-----------GT1                        <---------ATHB12 ---->DEAR3(1)--------->ZAT2         --------->YAB1<------ZmHOX2a(1)      ------>NtERF2 --->DEAR3(2) <---------At4g35610   <---------AHL20(2)          --------->ANAC55(2) ----MYB55(2) <---------ZAT2       --------->AHL20(2)           --------->ANAC58           --------->DAG2 --->MYB46(3)<---------ATERF1(1)   --------->AHL20(1)           --------->ANAC58<---------ICU4 ----NtERF2 <-----------RAV1(2)    <---------AHL20(1)           <---------ANAC55(2)       ---------->DOF2   gccggtttcttggggcagctgctcgcaagcgtcggaatataatcaccgcctgaggaaaccgaagactcgtaatcggagccaaacatttcagaaaaagcag  13019000                                                             ------>ZmHOX2a(2)                                                            <------ZmHOX2a(2)                                                            <---------GLK1(1)                                  --------->ANAC58         <---------AGP1                       <---------ZAT14                     --------->ARR11(3)                       --------->ZAT14         ----------->GT1                     --------->ZAT14          <---------TOE1(3)                        <---------At4g35610                --------->At4g35610  --------->GLK1(2)     <---------ARR11(3)    <---------AtMYB61           --------->YAB1         --------->ANAC46        --------->RVE1(1)  <------MYB46(1)         <---------WOX13(1)       --------->ANAC58     ---------->DOF2   <-----------RAV1(1)       --------->ATHB12--------->ZAT18        <---------TOE2(3)     <----------DOF2    --------->At4g35610      <-------TEIL <---------------AtSPL8     --------->DAG2--------->GLK1(1)<------MYB83      ------   aaaatgagttcattgatcagaagagtactctgtttcaagaaactggataaggtaactaaaagatctctgtcttttttgttggtatggtttgctgaaataa  13019100                                                                                              <------                                                                                              <------                                                                                             --------                                                                                             <-------                                                                                           ----------                                                                                         <------NtERF2                                                                                       <---------ANAC46                                                                                       <---------ANAC58                                                                                       <---------ANAC58                                                                                      <---------LBD16                                  <---------AHL20(2)                              <---------ICU4                        <-----------RAV1(2)                  <---------ANAC58     --------->YAB1                   >>>>>>>ZML2   --------->AHL20(2)          <---------ANAC58    <---------YAB1 --->YAB1 <----------DOF2      *TSS <---------TOE2(3)---------->DOF2           --------->YAB1<-------   tagtttctctctctttctgttctagttcaggtggatttaatgtttgtagataaataaaagttggagtgagagcatgctgttttataatggcggaagatat  13019200                                                            --------->ANAC46                                                           <---------REM1(2)                                                 --------->O2       ---------->DOF2                           <---------ANAC55(2)                           <----- ---CCA1(1)                                      --------->ANAC55(1)                           ------ ---RVE1(1)                                      --------->ANAC46                             ======= ->ARR11(3)                                      --------->ANAC58         ----------->GT1     ======= --ARR11(3)                                      --------->bZIP60(2)      --------->YAB1      <------ZmHOX2a(1) ->ARR10      --------->DAG2                     --------->ANAC58   --------->ANAC58        <-------- --ARR14(2) ---------->DOF2                      --------->ANAC55(2)--------->ANAC58        <--------   tttagaggcaaaagaaaaggcgaagacggagtttgtgtctctggtaatgccacgtaaactatacacagcgaagcaattgtaaaatgagtagtttaaggat  13019300                  ------->MYC3                  <-------MYC3                 --------->TGA1a                 --------->O2           ------>ZmHOX2a(2)          <------ZmHOX2a(2)          --------->CCA1(2)         <---------AGP1         --------->AGP1                                            <----------DOF2         --------->ARR14(2)                                        <---------DAG2         <---------ARR14(2)                                       --------->TOE2(3)         <---------ARR14(3)                                       ===================================         --------->ARR11(3)                                       <---------------AGL15       ----------->ARR10--------->LBD16                           --------------->AGL15 <---------ATHB12<---------O2                                --------->YAB1 ----ARR14(2)    ===========================bZIP_DOF        <---------YAB1                     <----- --->ARR14(2)<---------------------WRI1                   --------->YAB1                   <---------ANAC58 =================HOX2a_HOX2a                             <---------ICU4                   <---------ANAC58 ================HOX2a_HOX2a                             <---------YAB1                    <---------ANAC46 -TOE2(3)<---------ARR11(3)                              --------->ICU4                <----------DOF2 -TOE1(3)--------->ARR14(3)      <----------DOF2<-----------GT1<-----------GT1    <-----------GT1 ---   tcactcattaagatctgccatgtgtccagagaagactttttttgacttattcactcgttattattatacctttatgagttttataaactctttgcgtatg  13019400                                                       <---------AHL20(1)                                                       --------->AHL20(1)                                                       <---------AHL20(2)                                                      --------->AHL20(2)                                                      --------->YAB1                                                     <---------YAB1                                                    --------->AHL20(2)                                                   <---------ICU4                         <---------TOE1(1)         <--------HAHB4                      --------->ZAT14             <---------YAB1              <------ZmHOX2a(1)  <---------ANAC46 --------->ICU4        <-------GAMYB --------->ZAT18   <------------MYB.PH3(1)                 <---------MYB52(1)       <---------MYB46(3)<---------TOE2(1) <---------MYB52(1)          --------->ARR11(3)      <---------ANAC46<---------ZAT14   <------------AtMYB77       ---------->DOF2--------->MYB52(2) --------->ALFIN1  <---------ANAC46   <---------ARR14(2)      --------->LBD16 ----------->GT1 <-----------RAV1(1)  <---------ZAT18 --------->MYB52(1)      ------>ZmHOX2a(1) --------->DOF5.7(2) =============================================================================MADS_MADS ----YAB1   <---------TOE2(3) <---------REM1(1) <---------ICU4--------------->AGL15 ---->TEIL  <---------TOE1(3) --------->ALFIN1  --------->YAB1<---------------AGL15           -------   aatgtgtggctgttaaggatttagtgtactaggtgtagggtaaccgttattcattattatattcctgaataaagaaattgtcgttaattgttcacccgtg  13019500                                <---------GLK1(2)                             <---------TOE2(3)                           <---------AHL20(2)                           --------->AHL20(2)                      <---------ARR11(3)                      --------->ARR11(3)                      --------->ARR14(2)                     <------ZmHOX2a(1)                                       <---------HSFC1(1)                    ----------->GT1                                          <---------HSFB2a(2)           <---------GLK1(2)---------->DOF2                                  --------->HSFC1(1)     <         <---------YAB1<---------CCA1(1)                                  ------>ZmHOX2a(1)         -       ---------->DOF2<---------ARR14(2)                       ---------->DOF2                 ------ -->LBD16--------->ICU4<---------RVE1(1)                     <---------YAB1  --------->HSFB2a(2)  ---   tattagacataaagattgtgagaggatatttaaagatgctcttcttgtgtaatttctcccattcttatagcacatccttctagaatatgaattgggagag  13019600  Previous    Next  AGI:  At4g25480.1    Description:  DREB1A (DEHYDRATION RESPONSE ELEMENT B1A); DNA binding / transcription activator/ transcription factor. Identical to Dehydration-responsive element-binding protein 1A (DREB1A) [Arabidopsis Thaliana] (GB:Q9M0L0;GB:O65612;GB:O82131;GB:Q1ZZS0;GB:Q2HII7;GB:Q5QE70;GB:Q5Y4C4;GB:Q9SAZ3); similar to CBF2 (FREEZING TOLERANCE QTL 4), DNA binding / transcription activator/ transcription factor [Arabidopsis thaliana] (TAIR:AT4G25470.1); similar to DREB1A [Nicotiana tabacum] (GB:ABD65969.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding Range:  from: 13018224    to: 13019131    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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