Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <-------PIF5                                              ------->MYC4                                              ------->MYC3                                              <-------MYC3                                              <-------MYC4                                              ------->MYC2                                              ------->PIF5                                              <-------MYC2                                              ------->PIF4                                              <-------PIF4                                             --------->ANAC58                                             <---------O2                                             --------->TGA1a                                             --------->O2                                             <---------ANAC55(2)                                           <---------ALFIN1                                           <------------OsbHLH66                                         --------->DEAR3(1)                                        --------->ANAC46                                      --------->DEAR3(1)                                      --------->AtMYB61                                   --------->ANAC46                                   <---------ALFIN1                     <----------DOF2  <---------ALFIN1                     ==================================bZIP_DOF                    ------>ZmHOX2a(2)<---------MYB55(2) ->MYB46(1)        <---------YAB1 --------->MYB46(3) ->MYB83    ------->MYC3     <---------ANAC58--------->ANAC58                                   ----- ---MYB59   <-------MYC3     <---------ANAC58<---------TGA1a               --------->ICU4   --------- --------->AG     <---------ARR11(3) --------->MYB46(3)                 <-------TEIL     --------->AtMYB61 --------->AGL1   --------->ARR11(3)------>NtERF2          --------->ARR11(3)           --------->ANAC46   attagacaattccacatggtgatctttgatggcctccccaccaccgcacgtgaatttggaataccttgtttagtttcattatcaaattacacctaaacgc  12977000                                                                   --------->ALFIN1                                                                  <-------PIF5                                                                  ------->PIF5                                      ----------->RAV1(1)         <-------MYC2                                   <---------ANAC55(2)            ------->MYC2                                   --------->bZIP60(2)            <-------MYC3               <---------AHL20(2)  --------->ANAC58               ------->MYC3              <---------AHL20(2)   --------->ANAC58              <---------TGA1a           --------->AHL20(2)      --------->ANAC46              --------->TGA1a          <---------AHL20(2)       --------->ANAC55(2)           <---------O2          <---------AHL20(1)       --------->AtLEC2              ===================MYC_MYB          --------->AHL20(2)       --------->ANAC55(1)           --------->O2       --------->AHL20(2)     --------->ANAC46            <---------ARR11(3)     --------->ARR14(2)       <---------AHL20(2)     --------->ANAC58         --------->AHL20(2)      --------->LBD16      --------->AHL20(2)      --------->ANAC58         <---------AHL20(2)----------->HVH21      <---------AHL20(2)    ===============================================bZIP_DOF              <---   <---------ICU4     --------->WOX13(1) ----------->RAV1(1)     <---------ANAC46<---------ARR14(2)  --------------->AGL15     ---------->DOF2 ------->GAMYB<---------CCA1(2) -------->P--------->LBD16 ------>GT1<---------AHL20(2)--------->DAG2 ===============================MYC_MYB <---------LBD16--- ->DOF2--------->AHL20(1)--------->YAB1 --------->MYB46(3)--------->ARR11(3) <---------LBD16    <----   gttactaattaaattatttattgtctatcaaaaagccacgcaacaacagtctagcatttaaatcttcacgtgggtctaacccggttccggtttcattatc  12977100                                                                    <---------AHL20(1)                                                                    --------->AHL20(1)                                                                 --------->AHL20(1)                                                                 --------->AHL20(2)                                                                 <---------AHL20(2)                                                             --------->AHL20(2)   <---------YAB1                                                            <---------AHL20(2) <---------MYB52(1)  --------->ARR14(2)                                        --------->AHL20(2)<-------GAMYB  <---------ARR14(2)                                  ----------->GT1     <-----------HVH21 ------LBD16                                         <----------ID1 <---------AHL20(2) ------>LBD16                                        ----------->GT1--------->ARR11(3)          <---- -----LBD16                                        --------->MYB52(1) <------------CBF          <----   cgggtatatgttttggcttcgtctgaatttgaatttgagttttctcattcaaaaaacgataaataaataaaatattggtcagttattctttctatggttc  12977200                                                                                                    -                                                                                       --------->ANAC46                                                                                       --------->ANAC58                                                                                       --------->ANAC58                                                                                    --------->ARR14(2)                                                                                    <---------ARR14(2)                                                                                --------->YAB1      -                                                                               <---------ATHB12     -                                                                              ------>MYB46(1)       <                                                                              ------>MYB83          -                                                                             --------->WOX13(1)     -                                                                           ------------>CBF         - -----ANAC58     --------->MYB52(1)                                        --------->MYB46(3)-------- -----ANAC58  --------->YAB1                     <----------DOF2         <-----------GT1     --------   ttgtttgatatagaaagaataacaggttttggatttgtctgtgtgtttggactttggattagtattcattcggtttaaccaatcaaaattcgcaacctta  12977300                                                                        ----------->RAV1(1)                                                                      --------->LBD16                                                                     --------->ANAC58                                                                     --------->HSFB2a(2)                                                                     --------->ANAC58                                                                     --------->ANAC55(2)                                         <---------AHL20(2)          --------->ANAC46                                 --------->YAB1                     <---------LBD16                                <---------ATHB12                  <---------ARR14(2) -------->ANAC55(1)             --------->ICU4          <---------AHL20(2) -------->ANAC55(2)         <---------ATHB12            --------->AHL20(2) -------->ANAC58            ------------>CBF           <---------AHL20(1) ---------ANAC55(2)      <---------AHL20(2)            <---------AHL20(2) ---------->GT1         --------->AHL20(2)       ----------->GT1  --------->ARR14(2) -------->ANAC58     --------->ATHB12   --------->AHL20(2)   <-----------GT1              <---------- -------->ANAC46    --------->ICU4      <---------AHL20(2)  <-----------GT1 --------->At4g35610 ->TOE2(3)          <---------YAB1 ------------>CBF*TSS--------->AHL20(1)   <---------At4g35610 ->TOE1(3)          <---------ATHB12 --------->WOX13(1)--------->AHL20(2) --------->MYB46(3)   <-----   acacgttataaaccatgatgtaatgatttaatcaatgatcaattaaatgtatagaaatttattttccatttccgcaacagctcaaaacgttttctctctt  12977400                                                       --------->ARR14(2)                                     ----------->RAV1(1)     ------>ZmHOX2a(1)                                  --------->ANAC58     --------->ARR11(3)                                  --------->ANAC46     <---------ARR11(3)   --------->At4g35610                                  --------->ANAC58     --------->GLK1(2)    --------->ZAT2                                 --------->DAG2        <---------ARR14(2)   <---------At4g35610 -GT1                           ---------->DOF2        <-----------ARR10    <---------ZAT2 -----DOF2             <---------MYB52(2)       <----------DOF2   --------->REM1(2)   ttccgattttagtctaaaaactgaaacaaacacaaaaagcaacaatttgtctttgaaaatctcctctgtgtatggttcagcttcggtttactaaatctct  12977500                                                                                  <------ZmHOX2a(1)                                                                              <------NtERF2                                                                              <---------MYB52(1)                                                                             <-----------HVH21                                                                             <---------SPL7                                                                             <---------RAP2.6(3)                                                                             <-----------TGA1                                                                             ------>NtERF2                                                                            <---------bZIP60(1)                                                                            --------->bZIP60(2)                                                                            --------->RRTF1(3)                                                                            --------->RAP2.3(2)                                                                            --------->O2                                                                            --------->ATERF1(2)                                                                            <---------ATERF1(2)                                                                            --------->DEAR3(1)                                                                            --------->RAP2.3(3)                                                                           --------->ERF1                                                                           --------->RAP2.3(1)                                                     --------->ARR14(2)    <------NtERF2                                             <------NtERF2                <---------ZAT18                                         <---------ATERF1(1)             --------->DEAR3(1)           --------->WOX13(1)            ------>NtERF2                  --------->At4g35610         <------ZmHOX2a(2)       <---------ANAC58    <---------ARR14(2) <---------ABI4(2)   <------NtERF2                <---------MYB46(3)==============HOX2a_HOX2a--------->RRTF1(1)  ------>NtERF2                <---------ARR14(2) ------>ZmHOX2a(2)    <---------ATERF1(1)  <-----------TGA1            <---------MYB52(1)<---------MYB52(1)   --------->At4g35610  <-----------HVH21          --------->LBD16------>NtERF2            <---------ZAT2  <---------RAP2.6(3)      <---------LBD16--------->ATERF1(1)        <---------At4g35610 <---------ATERF1(2)     --------->ARR14(2)--------->ARR14(2)        --------->ZAT2 <---------bZIP60(1)     <---------ARR14(2)<---------ARR14(2)       --------->ANAC46 --------->bZIP60(1) <------NtERF2       --------->LBD16   <----------DOF2<---------ATERF1(1) <---------ANAC58  <---------ALFIN1    <---------LBD16   ------>ZmHOX2a(1)------>NtERF2 --------->RAP2.6(2)------>NtERF2<---------ANAC58<------ZmHOX2a(2) <-----------RAV1(2) <---------ANAC58 <------NtERF2--------->ARR14(2)===============HOX2a_HOX2a--------->ORA47(2)   atgccgtcacgatcaatctcggcaccggttccggttcttgctccggctccgatcgtttcctctttagtcccagcagcgccgtcaggacatcagaataaga  12977600                                          <---------MYB52(1)                                         <---------DEAR3(2)                                       --------->DEAR4(2)                                       --------->ATERF1(1)                                      <---------RRTF1(1)                                      <---------RAP2.6(1)                                      <---------ATERF1(1)                                      <---------RAP2.3(1)                                      <---------ERF1                                      ------>NtERF2                                     --------->DEAR3(1)                                    <---------ABI4(2)                                    --------->ATERF1(1)                                    <------NtERF2                                    --------->RRTF1(1)                                    --------->DEAR4(2)                                    --------->ERF1                                    --------->RAP2.6(1)                                    --------->RAP2.3(1)                                   ------>NtERF2                                   <---------ATERF1(1)                                   <---------ORA47(2)                                   <---------RAP2.3(1)                                  <---------ATERF1(2)                                  --------->ATERF1(2)                                  <---------RAP2.3(3)                                  <---------RAP2.3(2)                                  --------->DEAR3(1)                                  <---------DEAR3(1)                                 --------->RAP2.3(1)                                 --------->ATERF1(1)                                 <------NtERF2                   --------->MYB52(2)<---------DEAR3(1)                   <---------ANAC58<---------DEAR4(2)                   <---------ANAC58<---------ERF1            <-----------GT1      --------->DEAR3(2)                                               <--      --------->HSFB2a(1)       <---------ATERF1(1)                                          <-------     --------->GLK1(2)     <---------ANAC58                                                 ---------     --------->ARR14(2)    <---------ANAC46                                                 <--------     ------->TEIL<---------MYB52(1)--------->LBD16                                         <------NtERF2     <---------ARR14(2)    <---------ANAC58                                               --------->LBD16     <-----------ARR10    <------NtERF2<------NtERF2   --------->YAB1                    --------->RAP2.6(2)     <---------ARR11(1)  --------->MYB55(2)        <----------DOF2                      <---------LBD16    <---------CCA1(2)    <---------MYB46(3)<---------ARR14(2)                          <---------At4g35610    <---------ARR14(1)  <---------RAP2.6(2)--------->ARR14(2)        <---------MYB52(1)--------->At4g35610   caacgcgaatctttccaccgttcgtggtggctggagccggcgccggtttctctcttttcatcactctctccgtctgtttctgtaaattcagccggaaacg  12977700                                                  <-------MYC3                                                  ------->MYC3                                                  <-------PIF5                                                  ------->PIF5                                                  ------->MYC2                                                  <-------MYC2                         <---------ARR14(2)                                                 <---------O2                          --------->ARR14(2)                                                 <---------ANAC55(2)               <------NtERF2                                                 --------->ANAC58                 ------>NtERF2                                                 --------->ANAC58                 --------->MYB52(1)                                                 <---------TGA1a                 --------->DEAR3(1)                                                 --------->ANAC55(2)             <---------ALFIN1                                                 --------->O2                   <---------ABI4(2)                                                 --------->TGA1a                <------NtERF2         ------>NtERF2                           --------->bZIP60(2)           ------>NtERF2         --------->LBD16                       <------------OsbHLH66           <---------ATERF1(1)        <---------DEAR3(1)                     <---------ALFIN1               --------->ANAC58       <---------LBD16                        <------NtERF2                   --------->ANAC58     --------->DEAR3(1)                      ------>NtERF2                    --------->ANAC46-------  <---------ALFIN1                          --------->DEAR3(1)            <-----------HVH21   <------ -----TEIL   <------NtERF2                  <---------ETT(2)       <---------CCA1(2)  <---------MYB52(1) --DOF5.7(2)--------->LBD16               <-----------HVH21--------->YAB1--------->ANAC46 <----------DOF2 >ARR14(2) <---------ANAC46      <---------LBD16------>NtERF2 --------->ARR14(2)--------->ATERF1(1) -ARR14(2)<---------LBD16------>ZmHOX2a(1)<---------ATERF1(1) <---------ARR14(2)----------->HVH21<---   ttcatcacctccggcggaaaacgcttcctcttcgcctcggagaccgtcgccacgtgagttttcatattcgtctctccgtcgcgccaccggttctttctcg  12977800                                                           <---------ANAC46                                                          --------->ATERF1(1)                                                          <------NtERF2                                                         <---------RAP2.3(1)                                                         <---------ATERF1(1)                                                         ------>NtERF2                                                         <---------ERF1                                                         <---------DEAR4(2)                                                        <---------RAP2.3(3)                                        <---------LBD16 --------->ATERF1(2)                   ------>ZmHOX2a(2)                                       <---------ANAC46 <---------ATERF1(2)                  <-------                                       <---------ANAC58 <---------RAP2.3(2)                 ---------                                <---------ANAC58        <---------DEAR3(1)                  <--------                                <---------ANAC58        --------->DEAR3(1)                  <--------                                <---------ANAC46       --------->ATERF1(1)                  ---------                             <---------ANAC58         <---------RAP2.3(1)                   <--------                             <---------ANAC58         <---------ATERF1(1)                   <--------                             <---------ANAC46         ------>NtERF2         <---------TOE1(3)--------                       --------->ARR14(2)             --------->LBD16<---------At4g35610   <---------GLK1(2) -->HSFB2a(2)          <---------ARR14(2)            <---------DEAR3(1)     <---------TOE2(3)<------ZmHOX2a(2) ---HSFB2a(2)<-----------HVH21 <------NtERF2        <---------LBD16 ------->TEIL--------->MYB52(1) --------RAV1(2)      <------NtERF2    <---------ANAC58<---------ABI4(1)   ---------->DOF2 <------ZmHOX2a(1)   caggcgaatagactaggtcagggcggatttggcgtcgtgtttcgtggaactatctccggcggcgagaatgtagctgttaaagtaatggattcaggatctc  12977900  Previous    Next  AGI:  At4g25386.1    Description:  unknown protein Range:  from: 12977014    to: 12977148    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g25390.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G51770.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70068.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 12977351    to: 12979578    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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