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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                           <--------
                                                                                        <---------PCF5
                                                                            <------ZmHOX2a(2)     --
     --------->GLK1(1)                                        ----------->HVH21         ------>NtERF2
     <---------GLK1(1)          <---------YAB1       --------->YAB1        --------->ARR11(3)     --
 <---------WOX13(1)             --------->ICU4     --------->AtLEC2        <---------ARR11(3)-------
------At4g35610         <---------GLK1(1)   ------>ZmHOX2a(1) ------>ZmHOX2a(1)   --------->MYB52(1)
--->DOF2                --------->GLK1(1) ----------->RAV1(2) =====================HOX2a_HOX2a  <---
 
gctgatggatatcacagaggcatttggatatcgccatgatggtcatcctggtccattcagaagtcctgaccctaacaagatcactaaacggggaccagac  12972300
                                 --------->ANAC58
                                 --------->ANAC46
         --------->AtMYB61       --------->ANAC58
        --------->ANAC46       <---------AtLEC2
        --------->bZIP60(2)    <---------ANAC58
      <---------ALFIN1        <-------TEIL
    <---------ATERF1(1)   <-----------RAV1(1)
   --------->RAP2.6(2)--------->ZAT18
<---------ATERF1(1)   <---------ZAT14
---RAV1(2)         <---------ANAC58                                      <---------At4g35610  ------
------->SPL7       <---------ANAC46                       --------->ANAC58                 <------ZmHOX2a(1)
------->RAP2.6(3)  <---------ANAC58                  --------->ANAC46    --------->At4g35610 -------
-->MYB52(1)    --------->RAP2.6(3)     <------ZmHOX2a(1)  --------->ANAC58        <------ZmHOX2a(1)
------SPL7    <------ZmHOX2a(1)<---------ANAC58   <-------TEIL   --------->ARR11(3)   --------->CCA1(2)
 
ggacggcctccacctcaggactgcttgcactggtgcatgccaggaccagtcgatacatggaacgaaatggtcttggagctcataaggagagacaggaaaa  12972400
                                                --------->ANAC58     <---------YAB1          -------
                         ---------->DOF2        --------->ANAC46    <---------GLK1(2)     ----------
--->DAG2  <---------ANAC58                  <-----------GT1 <---------YAB1       --------->YAB1
--->DOF2  <---------ANAC58   <------ZmHOX2a(1)  --------->ANAC58  <---------YAB1<---------ZAT6
 
gctcatcaacttgacttggtttgaaactcaaaggatgagagagcatattacacgacttatactattaatctgattcttggttactgataaactcaaagat  12972500
                                                                   --------->MYB52(2)
                                                                  <-------TEIL
                                                               <---------MYB46(3)
                                                               <---------DEAR3(2)
                                                               <------MYB46(1)                ------
                                                               <------MYB83                  <------
                                   <------ZmHOX2a(1)           --------->MYB55(2)            -------
                                  <---------YAB1             <--------P                    <--------
                          --------->At5g28300          <---------YAB1                      <--------
-->YAB1                 <---------DEAR3(1)            --------->ZAT14       ------>ZmHOX2a(1)-------
>DOF2     <---------ARR14(2)     --------->MYB59      <---------ZAT14<---------MYB52(1) --------->AHL20(2)
 
aaactcacttgtagatttgtgctaggcacggtgagttaggattagaatttgttccactatacttgttggttcgtttgtcctgagattgaaatttaagatt  12972600
                                                              --------->ATERF1(1)
                                                              --------->RAP2.3(1)
                                                             <---------ATERF1(1)
                                                            --------->ATERF1(1)
                                                            --------->ALFIN1
                                                            <---------RAP2.3(3)
                                                            <---------DEAR3(1)
                                                           --------->ATERF1(1)                 <----
                                                           <---------ABI4(1)            -------->HAHB4
                                                          --------->ALFIN1              <---------ICU4
     <---------YAB1                                      <---------ANAC46               --------->ATHB51
   --------->CCA1(2)                                   <---------LBD16                  --------->YAB1
--->CCA1(2)                                           --------->ALFIN1                 --------->ICU4
---ARR14(2)                                      <---------AHL20(2)                  --------->YAB1
-->ARR11(3)                                    ----------->TBP<------NtERF2       ----------->GT1
-TOE1(3)                                     --------->AHL20(2)                 --------------------
-TOE2(3)                                     <---------AHL20(2)               --------->At4g35610
-->ARR11(1)          --------->YAB1      --------->AHL20(2)--------->ALFIN1   <---------At4g35610
 
tgggagttatgagttcaagtttattcatactagtcgaaatttcataaattatataaactggggggggcgcatttgcaaaatagctgagtaataatcgcct  12972700
                                                              --------->ZAT14
                                                              <---------ZAT14
                         ---------->DOF2                   <---------ANAC46
                   <---------ETT(1)                     <---------ANAC58             ---------->ID1
                 *TSS  --------->AtMYB61                <---------ANAC58           --------->WRKY12<
           --------->MYB46(3)                           <---------bZIP60(1)        ----------->HVH21
          --------->ANAC46                              --------->bZIP60(1)      <----------DOF2   -
          --------->ANAC58              ------>ZmHOX2a(1) <------NtERF2  <---------DAG2            =
-----CCA1(2) ---------->DOF2     <---------YAB1         <---------ANAC46 <----------DOF2           =
->WRI1    --------->ANAC58    <----------DOF2----------->GT1<---------SPL7   ---------->ID1       --
 
atctcactgactcacccaaagcccgaccaaaagcttttgattcctcaagagtgaaaatggcgtcgtacacagtctcctttatccctttgacgctctctaa  12972800
              <---------HSFB2a(2)                                                 --------->GLK1(2)
      <----------DOF2                                                           --------->HSFB2a(1)
     ------>ZmHOX2a(2)                                                          --------->HSFC1(2)
    <------ZmHOX2a(2)                                                           <---------HSFC1(2)
   <---------ARR14(2)                                                           <---------HSFB2a(1)
   --------->ARR14(2)                                                   --------->ANAC55(2)
   <---------ARR11(1)                                                   <------MYB46(1)
   --------->ARR11(3)       ================================HOX2a_HOX2a <------MYB83              <-
   <---------ARR11(3)       ------>ZmHOX2a(2)                           <---------ANAC55(2)      ---
   <-----------ARR10       <---------GLK1(1)                            ----------->GT1          ---
  <---------CCA1(2)        --------->GLK1(1)         ------>ZmHOX2a(1) --------->MYB111(1)      <---
  <---------ARR14(1)      --------->ARR11(3)     --------->GLK1(1)     --------->MYB46(2)       ----
--------->TOE2(1)         ------->TEIL           <---------GLK1(1)     --------->MYB59        ------
--------->TOE1(1)         --------->ARR14(2)    --------->ARR14(2)    <---------MYB55(1)  <------NtERF2
---------LBD16--------->HSFB2a(2)               <---------ARR14(2)   <---------MYB52(1)  -----------
----->ZmHOX2a(1)          <---------ARR14(2)<---------HSFB2a(2)     <-----------HVH21    ------>NtERF2
============HOX2a_HOX2a   <---------ARR11(3)<---------LBD16      <---------------AGL15  --------->ETT(2)
===================================HOX2a_HOX2a  <---------GLK1(2)--------------->AGL15  --------->bZIP60(1)
------->TOE1(2)           <---------AGP1    --------->HSFB2a(2) <-----------------AGL1  <---------ETT(2)
 
tcctcggatctttgtttcgagacagaatggatctccctcgtcttcttctcggattcctctaacgtcttctctgttaggtaagaagcttctggcgacacaa  12972900
                                             <---------ZAT2
                                             --------->ZAT2
                                  <---------WRKY18(1)
                                 ----------->HVH21
                                <----------DOF2
                               <---------ANAC58
                               <---------ANAC58 --------->ANAC58
                            <---------MYB52(1)<---------ALFIN1
         --------->ZAT2    --------->LBD16   <------NtERF2                         --------->At4g35610
----------HVH21           <---------DEAR3(1)--------->ANAC58                       <---------At4g35610
------>DEAR3(1)       <---------ZAT2        --------->ANAC58             --------->MYB52(2)
---->GAMYB            --------->ZAT2       <---------ATERF1(2)         <---------MYB52(1)     <-----
---------AtMYB77     --------->ANAC58      --------->ATERF1(2)       <---------ANAC58     --------->At4g35610
----->MYB46(3)       --------->ANAC58  --------->TOE1(1)             <---------ANAC46     <---------At4g35610
--->MYB52(1)   ---------->ID1 <---------MYB46(3)--------->ANAC58     <---------ANAC58----------->HVH21
>RAV1(1) <---------ZAT2  <---------LBD16 ------>NtERF2    --------->ANAC46       <-----------GT1 <--
 
ccgtcgcatcgctgcttcgtccccaagctccggtgcttgacctcggccagcacggtcttaaacgtccctattgcgttagtttttttatctgacagctctt  12973000
                                    --------->ARR11(3)                         --------->LBD16
                                 --------->ANAC58                             ------->GAMYB
                                 --------->ANAC58                            <---------LBD16
        <---------ICU4          <---------LBD16                         --------->ANAC46
       <---------YAB1    <----------DOF2                                --------->ANAC58
   <----------DOF2    ---------->ID1--------->ARR14(2)   <---------TOE2(3)  -------->P
-----DOF2            <-----------GT1<---------ARR14(2)   <---------TOE1(3)  --------->MYB52(1)
---------GT1 <---------LBD16   <---------ALFIN1      <-------GAMYB      --------->ANAC58    <-------
 
ttacatctttatcatttctgggtttttcctttcaccacggatattgaagcttagggtgttaaggttgaatttttcaggcaaccggagaatggttcttcgg  12973100
      ---------->DOF2        <---------ANAC58
   ------>ZmHOX2a(2)         <---------ANAC55(1)
  <------ZmHOX2a(2)          <---------ANAC46
 <---------ARR14(2)          <---------ANAC58                                        <---------AHL20(2)
 --------->ARR11(3)          <---------ANAC55(2)                                     <---------YAB1
 --------->ARR14(2)          --------->ANAC55(2)                                <-------------------
 <---------ARR11(3)--------->ANAC58       <---------YAB1                 <---------TOE1(3)
--LBD16            --------->ANAC58 <---------GLK1(2)                    <---------TOE2(3)
 
ataagatcccaaagtgagtctcactccaaattacgtatagaatttgtaattgtagagcttatacgtttgaattgttgaggttttttttttaattgtttga  12973200
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AGI:  At4g25360.1   
Description:  similar to YLS7 (yellow-leaf-specific gene 7) [Arabidopsis thaliana] (TAIR:AT5G51640.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70095.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253)
Range:  from: 12969587    to: 12972654    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At4g25370.1   
Description:  Clp amino terminal domain-containing protein. similar to Clp amino terminal domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G12060.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60931.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49746.1); contains InterPro domain Clp, N-terminal; (InterPro:IPR004176)
Range:  from: 12972718    to: 12974880    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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