Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           ------>MYB83                                         ------>MYB46(1)                                       --------->DEAR3(1)                                      --------->DEAR3(2)                     --------->AHL20(2)------->GAMYB                     <---------AHL20(2)--------->DREB2C(2)                  --------->TOE2(3)   --------->MYB46(3)        --------->MYB52(2)    --------->AHL20(2)      <---------MYB52(1)  --------->AHL20(2) --------ATHB12<-----------GT1--------->YAB1          <---------ATHB12   aatcaattgttagttttttacattaaaatgaattatatcaaccgactaaaaaacaaatcagtattagttctatcgcattgtagttcccatacaacttaat  11008300                  ------>ZmHOX2a(2)                --------->ARR11(3)                <---------ARR11(3)               --------->YAB1               -------->HAHB4              --------->ICU4                      <---------ICU4              <---------YAB1                     <---------YAB1              <---------MYB46(3)            --------->YAB1                     <---------ICU4      ------>ZmHOX2a(1)          -------            <---------ICU4       <---------AHL20(2)    <---------YAB1   <----------DOF2       <------           <---------AHL20(2)   --------->AHL20(2)--------->YAB1   <----------DOF2    --------->ICU4           <---------ATHB51   --------->YAB1   --------->YAB1 --------->GLK1(1)  ----------->GT1     ----------->GT1------>ZmHOX2a(1)         <---------ATHB12<---------GLK1(1)<--------P   <--------   ttttgtgttgtaaataatgatcctactgtctctaataaatgtgaatcaataatcataactattgaaatccttttctttttggttagtaaaaatgaagtgt  11008400                           --------->CCA1(2)                           --------->GLK1(1)      <-----------GT1     --------->ARR11(3) ----------->GT1          <---------ARR14(2) ---->GT1                 --------->ARR14(2)                                            <-----------GT1 ---ZAT6     <---------AHL20(2)                  <---------AHL20(2)                <---------AHL20(2) -ANAC46     --------->AHL20(2)    <---------ATHB12          --------->AHL20(2)    --------->AHL20(2)   aaatagtataactgtttaatttagttcagatatacaaatcaacaaaactacttaatttgaagattaattcagtttttttttttttttaattttctgttta  11008500                                                                           <----------DOF2                                                                   <---------At4g35610                                                                   --------->ATERF1(1)                                                                   <------NtERF2                                                                  <---------ERF1                                                                  <---------ATERF1(1)                  ----------->GT1                                 <---------RAP2.3(1)                  <------MYB83                                    ------>NtERF2                  <------MYB46(1)                                <---------RAP2.3(2)                 --------->MYB59                                 <---------RAP2.3(3)            <---------AHL20(2)             <-----------GT1       <---------RAP2.6(2)            <---------AHL20(1)         --------->AHL20(2)        <---------ANAC46            --------->AHL20(2)         <---------AHL20(2)        <---------DEAR3(1)            --------->AHL20(1)      --------->ARR11(3)          <---------LBD16           --------->AHL20(2)       <---------ARR11(3)          --------->RAP2.6(3)          <-------   taaaactactgaattttatttggtataaatggattgaagattttattacaaaacaaaatcacatttggcggcttcttctttttatgttctaaaccctttt  11008600                                             <---------AHL20(1)                                             <---------AHL20(2)                                             --------->AHL20(1)                                             --------->AHL20(2)                                        --------->TOE2(3)                                        <---------MYB59                                     <---------DOF5.7(2)                           <----------DOF2  --------->AHL20(2)                          <---------ANAC58------>MYB83                --------->GLK1(1)  --------->DOF5.7(2)             --------->ANAC46      <---------MYB52(1)                 --------->TOE2(3)             --------->ANAC58     --------->TOE2(3)   --------->HSFB2a(2)                  ----------    ------>ZmHOX2a(2)     <---------ANAC58------>MYB46(1)           <-----------GT1      ---------->DOF2 ---DOF2     --------->ANAC58     --------->TOE1(3)   <---------HSFB2a(2)    *TSS---------->DOF2   cttagatcggactccaagaaatctacttgctttaatcgttaacctaataaattcttctctaagttttttttttcttaactcatcaaagaaggaaagaaaa  11008700                      <-----------GT1                        <---------AHL20(2)                 <---------CCA1(1)                          <---------AHL20(1)                 <---------RVE1(1)                          --------->AHL20(2)                <---------ARR11(3)                          <---------AHL20(2)                --------->ARR11(3)                --------->ANAC46         <-----------HVH21   --------->DAG2       --------->ANAC55(2)                          <----- ->GT1  <----------DOF2    ---------->DOF2 <-----------GT1  --------->AHL20(1)            ---------->DOF2   aaaaaaacctctttcacagatatttaaccaaaaggttttagatttatactatacgttacaaataaaattcgagagtcaaattcaatcttgggaaaagctt  11008800                 <-----------HVH21               <------NtERF2      <---------ARR11(1)      --------->ARR14(2)      ------->TEIL   --------->ANAC46 <---------At4g35610      --------->GLK1(2)               --------->At4g35610      <---------ARR14(2)            --------->YAB1      <-----------ARR10          --------->YAB1                                                     -     <---------GLK1(2)      --------->ZAT18                             <---------ANAC58           --     <---------ARR14(1)     <-------TEIL               --------->ANAC46 <---------ANAC58      <------     <---------CCA1(2)  <---------------AtSPL8        <---------HSFB2a(2)                <---------TOE1(3) -----DOF2  ---------->ID1  <---------ZAT18           --------->HSFB2a(2)                <---------TOE2(3)   ttgttccgaatcttggccccttcacgaaggtacacttatcatctcactctctatttccagacacaaatctatatgcgttctgggtttttttagggtttcg  11008900                                                 <----------DOF2                                                ===================HOX2a_HOX2a                                                ------>ZmHOX2a(2)          ---------->DOF2                                               <------ZmHOX2a(2)      ----------->GT1                                               ====================HOX2a_HOX2a                                              <---------ARR11(3)    --------->ANAC55(2)                                              <---------AGP1        <---------ANAC55(2)                                              --------->ARR14(2)    <---------ANAC46   --------->ZAT18                            --------->AGP1<---------MYB52(1) --------->ANAC58                             <---------ARR14(2)   <---------LBD16          <-------- --------->ANAC46                             --------->ARR11(3) ----------->HVH21     <----------DOF2 --------->ANAC58     --------->MYB52(1)      <-----------ARR10 <-----------HVH21     ------>ZmHOX2a(2) -------->RAP2.6(3)--------->ANAC58 <---------AHL20(2)      ------>ZmHOX2a(1)       --------->ARR11(3) ------->MYB52(1)  <---------ANAC55(2)   <-----------GT1    =================================HOX2a_HOX2a -----------AGL1   --------->ANAC58<---------AHL20(2)      --------->TOE2(3)        <---------ARR11(3)   aaaacggcactgcatttcatcaagtaagggtttgttttttatttaacagatctttgttcttccttaggtcacgggttaaaagtatcgatctttgtgaact  11009000                         ------->TEIL                                 <----------DOF2                   <---------At4g35610                             ---------->ID1                   --------->At4g35610                         <----------DOF2    --------->ATHB12                   --------->ZAT2                     --------->ARR14(2)   <---------ANAC58       <--                <------ZmHOX2a(2)                  <---------TOE2(3)  ------>ZmHOX2a(1)          <---     <-----------------AGL3             <-----------RAV1(1)   <---------ICU4   <----------DOF2   <--- -ZAT18--------->At5g28300           --------->GLK1(2)<---------ARR14(2)   <---------ANAC58    <-----   taatctcactgtaaatggatcagcttgcatctctagcagagtctgtggctatggaggtttctcatctttatccttttgcttctttgatttgtgttttttg  11009100                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                --------------->AGL15             ---                                                                <---------------AGL15            ----                                                                <---------YAB1                   ----                                                               <-----------------AGL2            <---     ------>ZmHOX2a(1)     <---------ANAC58                    <-----------------AGL3            <--- --------DOF2              <---------AtLEC2         <-----------RAV1(1)                         ----- ------ANAC58              <---------ANAC58   --------->YAB1   <-----------------AGL1  <---------ANAC58 ------ANAC58    --------->TOE2(3)         --------->WOX13(1)--------->GLK1(2)         <---------ANAC58 ------GT1    <-----------GT1            <-------TEIL       <---------ARR14(2)<---------ANAC46<------ZmHOX2a(1)   ctttctcctccatttgtaacctctaatttgcatgtttgctagattcaattagcactgttgcagtttctgaatgtggaattgtgtttatttcttgcaggaa  11009200  Previous    Next  AGI:  At4g20400.1    Description:  transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein. similar to transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein [Arabidopsis thaliana] (TAIR:AT1G30810.1); similar to MEE27 (maternal effect embryo arrest 27), transcription factor [Arabidopsis thaliana] (TAIR:AT2G34880.1); similar to Os05g0302300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055137.1); similar to hypothetical protein OsI_018674 [Oryza sativa (indica cultivar-group)] (GB:EAY97441.1); similar to hypothetical protein OsJ_017199 [Oryza sativa (japonica cultivar-group)] (GB:EAZ33716.1); contains Range:  from: 11008677    to: 11013853    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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