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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
---------->
DOF2
--------->
GLK1(2)
<---------
YAB1
--------->
ANAC46
--------->
YAB1
----------------->
AGL3
<----------
DOF2
-
tcaatctactcacaacaaagcttacaatcacactcacaaaaacagagccaaaaacagagcaagagactcttttgatcaaactatgaaagtttcaataacc
10349200
--------->
ARR11(3)
<---------
ARR11(3)
--------->
ANAC46
<------
ZmHOX2a(1)
<---------
ZAT14
<------
ZmHOX2a(1)
----
----------->
GT1
--------->
ZAT14
<---------
TOE2(3)
------
----------->
GT1
<---------
ARR11(3)
<---------
TOE1(3)
--------->
ZAT6
--------->
YAB1
--------->
DOF2
--------->
AHL20(2)
<---------
ZAT6
---------->
DOF2
<------
ZmHOX2a(2)
aaaaaagataaaaactttcaattcaataacttcagtacacagaaactacagttaaggaggactcaaagaacttactatcagtaagtttcgatcaaaatca
10349300
--------->
ANAC58
--------->
AtLEC2
--------->
ANAC58
--------->
WOX13(1)
---------->
DOF2
<---------
ATHB12
---------->
DOF2
----------
--------->
HSFC1(2)
--------->
AHL20(2)
<---------
HSFC1(2)
<---------
ALFIN1
--------->
ANAC58
----->
At4g35610
---------->
DOF2
---------->
DOF2
--------->
MYB46(3)
--------->
ANAC58
--->
YAB1
----------------->
AGL3
---------->
DOF2
>>>>>>>>>>>>>>>>>
LFY
--------->
WOX13(1)
gaagcccaaaattccctccaaaaaaagcttcgaacttgaacaaagtgaaagactaaaaactcaccactgtttctaaataaaagacaatcaagcaaaagct
10349400
<----------
DOF2
<<<<<<<
ZML2
--------->
HSFB2a(2)
<---------
HSFB2a(2)
--------->
HSFB2a(1)
------->
TEIL
--------->
HSFC1(1)
--------->
ARR14(2)
<---------
HSFB2a(2)
<---------
ARR14(2)
---------->
DOF2
<---------
HSFC1(1)
----------->
GT1
--------->
GLK1(2)
--------->
AHL20(2)
--------->
HSFB2a(2)
>
DOF2
---------->
DOF2
<---------
ARR14(1)
<---------
AHL20(2)
<---------
GLK1(2)
<-
tctaagaacccctaaaacccttgtaaaattcaacgaatctagaacccttttagcattaaaatcaaaaagaagaaacccttattagcttctcgaaccctct
10349500
<---------
AHL20(2)
*
TSS
--------->
AHL20(2)
--------->
GLK1(2)
<--------
ATHB1
<---------
MYB59
<---------
ICU4
--------->
TOE2(3)
--------->
ATHB51
--------->
TOE1(3)
<---------
AHL20(2)
<---------
ATHB12
------->
TEIL
<---------
AHL20(1)
<---------
ATHB51
--------->
HSFB2a(2)
--------->
AHL20(1)
--------->
ICU4
<---------
HSFC1(1)
--------->
HSFB2a(2)
<---------
AHL20(2)
--------->
ANAC46
--------->
HSFC1(1)
<---------
HSFB2a(2)
--------->
AHL20(2)
--------->
ANAC58
------->
TEIL
<---------
HSFB2a(2)
<---------
ANAC46
--------->
ANAC58
<---------
CCA1(2)
--------
At4g35610
<---------
GLK1(2)
<---------
AHL20(2)
<---------
GLK1(2)
<---------
At4g35610
ctgcttctcgaacctaaacagcttctggacttgggtatatatattttaatcagacaagagaatttcaagcagc
aataatttgtctgcttctgtatctcta
10349600
<--
<---
--------->
LBD16
----
<---------
ANAC46
<-------
<---------
At4g35610
---------
--------->
At4g35610
<--------
<---------
LBD16
<---------
MYB52(1)
<-----------
RAV1(1)
--------->
LBD16
<------------
CBF
<---------
LBD16
--------->
ATHB12
<---------
WRKY18(1)
--------->
ATHB51
--------->
WRKY12
-------->
ATHB1
---------->
DOF2
--------->
WRKY38(1)
<---------
ICU4
<------
ZmHOX2a(1)
--------->
DAG2
----------->
HVH21
<---------
YAB1
<----------
DOF2
----------->
GT1
<---------
WOX13(1)
--------->
ICU4
--------->
GLK1(2)
<-----------------------
TaNAC69(2)
<------
NtERF2
tctataccattattgctgcggaaatatcagagagagagagagagactctttgaggagagaagaccgtagaaaagtaaacgagtcgattgacccggtgggg
10349700
<---------
ARR14(2)
------>
NtERF2
--------->
DEAR3(1)
-------
GLK1(1)
<---------
DOF5.7(2)
------
ARR14(2)
<-----------
HVH21
<---------
ARR14(2)
----->
ARR14(2)
<-------
TEIL
--------->
ARR14(2)
--------
--
MYB46(3)
--------->
ARR14(2)
--------->
ATHB12
<---------
ANAC55(2)
<--------
>
ALFIN1
------>
NtERF2
<---------
DAG2
--------->
AHL20(2)
--------->
AHL20(2)
--------->
MYB52(1)
-
ANAC46
--------->
DEAR3(1)
<---------
ANAC46
<-----------
GT1
>>>>>>>>>>
AtSR1
--------->
MYB52(1)
atttacgacgacgacgattcgtcaaacctttcgtcgattttttatataactgattagcgattaaaaacgcgtaaacgataacaaaaaacgaacagtttct
10349800
--------->
YAB1
--------->
ANAC58
--------->
ANAC58
--------->
ANAC58
<---------
REM1(1)
--------->
DAG2
--------->
ANAC58
<---------
YAB1
<---------
TOE2(3)
--------->
ANAC58
<---------
GLK1(1)
<---------
YAB1
<-------
TEIL
--------->
ANAC58
--------->
YAB1
<-
->
GLK1(2)
<-----------
GT1
---------->
DOF2
<---------------
AtSPL3
--------->
At4g35610
<-
-
GLK1(2)
<---------
YAB1
<----------
DOF2
<--------
P
<---------------
AtSPL8
<---------
At4g35610
-------
gagggatttgtgattatacgatttagcttttgattacaaaaaggttgatgaagcaagtacgaatcagaacagaacagctgtttcatagttttacaaagat
10349900
--------->
YAB1
<---------
ANAC46
<---------
YAB1
<------
MYB83
--------->
YAB1
<------
MYB46(1)
<---------
ICU4
--------->
ATHB12
<---------
AtMYB61
<---------
AHL20(2)
-------->
HAHB4
--------->
MYB111(2)
<---------
YAB1
--------->
YAB1
--------->
MYB46(2)
--------->
AHL20(1)
<---------
YAB1
--------->
MYB111(1)
<---------
AHL20(1)
--------->
ANAC58
<
<---------
MYB46(3)
--------->
AHL20(2)
--------->
ANAC58
<-----------------
AGL2
<--
--------->
MYB55(2)
<---------
AHL20(2)
--------->
ANAC46
<---------
At4g35610
<----------
DOF2
--------
ANAC58
<---------
YAB1
<---------
YAB1
--------->
ICU4
----------->
GT1
-------
--------
ANAC58
--------->
AHL20(2)
<-----------
GT1
--------->
ICU4
--------->
DAG2
<------
-->
ATHB12
<---------
AHL20(2)
--------->
YAB1
--------->
ARR11(3)
---------->
DOF2
-------
tgggtttggtggaatgttttattattttattattatcaaaatcaccccatgagataatgatagagctgtttttggcataaagtttatttctttcaattat
10350000
<---------
MYB46(3)
------>
ZmHOX2a(2)
<-----
<------
ZmHOX2a(2)
------>
ZmHOX2a(2)
--------->
ARR11(3)
--------->
ARR11(3)
<---------
ARR11(3)
<-------
TEIL
<-----
----------->
GT1
--------->
ARR14(2)
<---------
HSFC1(2)
---------
AHL20(2)
<---------
ARR14(3)
<---------
HSFB2a(1)
-------
AHL20(2)
------->
TEIL
<---------
ARR14(2)
--------->
HSFC1(2)
-->
AHL20(2)
<---------
ATHB12
--------->
AGP1
--------->
HSFB2a(1)
---
AHL20(2)
--------->
WOX13(1)
--------->
ARR14(3)
<---------
RAP2.6(3)
<---------
ARR11(3)
-->
YAB1
<---------
WRKY38(1)
<---------
GLK1(1)
<---------
TOE2(3)
<---------
SPL7
<---------
MYB46(3)
ataaaaatgtgaatagtcaatgaatataagcatagagatcttgtttgtttgttaatgtagaagcatttatggccgtaagaaaattcgttgttgatctctt
10350100
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AGI:
At4g18880.1
Description:
AT-HSFA4A (Arabidopsis thaliana heat shock transcription factor A4A); DNA binding / transcription factor. Identical to Heat stress transcription factor A-4a (HSFA4A) [Arabidopsis Thaliana] (GB:O49403;GB:O82078); similar to AT-HSFA4C (Arabidopsis thaliana heat shock transcription factor A4C), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G45710.1); similar to heat shock transcription factor [Phaseolus acutifolius] (GB:AAL12248.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232)
Range:
from: 10347593
to: 10349573
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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