Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------MYB52(1)                                      <-------GAMYB                                 <------MYB83                                 <------MYB46(1)          ----------->GT1  <---------ANAC58             <--------P                --------->ALFIN1    ---------->DOF2  <---------ANAC58           --------->ATHB12          <---------ANAC46    <---------MYB52(1) ------>KAN4(2)              <---------MYB46(3)     <---------STY1(1)    ----------->GT1            - ---TEIL                 <---------WRKY18(1)        --------->STY1(1)--------->MYB46(3)    ---------- -->YAB1                ----------->HVH21   <---------AHL20(2)     --------->ANAC46        <---------MYB46(3)   cattccctgcttcttaatagcctggtttgactggttggcccgttgttttattccctagggtggaaaaatccacaaccgttaaaacccaaaccgtggttaa  9302400                                                      --------->YAB1                                                      --------->TOE2(3)                                                    <---------TOE2(3)                                                  <---------AHL20(2)                                          --------->ARR14(2)                               <---------AHL20(2)<---------AHL20(2)                               --------->AHL20(2)--------->AHL20(2)                 >>>>>>>>>MYB2                              --------->AHL20(2) --------->AHL20(1)        ------>MYB46(1)                --------->AHL20(2)        <---------ARR14(2)               ------>MYB83 -------->ATHB12<---------AHL20(2) --------->ARR11(3)----------->GT1     <---------MYB59 ->GT1<---------YAB1          <---------AHL20(2) <---------AHL20(1)      --------->AtMYB61        ---   attgatttgttattgcatttaaatctctctaaattaatatccagtatccaatataatgttaattctaaattaagaccaaactcgaaaaccaagttacaaa  9302500                                                                        --------->YAB1             <-                                                                       <---------ATHB12            --                                                                --------->LBD16                   ---                                     --------->DAG2           <---------LBD16                    ----                    <---------HSFB2a(2)                    ---------->DOF2               --------->ATHB12       --------->AHL20(2)          ---------->DOF2      --------->TOE1(3)               <---------YAB1       <---------AHL20(2)   <----------ID1              --------->TOE2(3)   --------->TOE2(3)    ---- -------->GT1       --------->HSFB2a(2)         --------->GLK1(1)    --------->YAB1--------->TOE2(3)-   tggttttatataattttagtttctaaaaaaaaaacaaaaaaggcaaactgaaatcaaaccataaaccggattaatcatccataaaccatagttattggca  9302600 --------ZAT14                                                                                     -- ------->ZAT14                                                                                   ---- -------->RAV1(1)                   --------->ARR11(3)                 --------->ARR14(2)      ------ ----->ANAC58                       <---------ARR11(3)        <---------ANAC58                 <----- ----->ANAC58          <---------AHL20(2)                     <---------ANAC58          <---------AHL20(2) -------->ZAT6  --------->ARR14(2)  --------->ARR14(2) <---------ZAT6  <---------ARR14(2)   <--------   caacactaaattggcccatatttgtttatttgggccaatatctacatataacgtctagtgttttccgagcctggttctggcccagagtttttattttcca  9302700                                                                                         --------->ANAC58                                                                                         --------->ANAC58      --------->ANAC58                                                     --------->ANAC55(2)      --------->ANAC58           ------>ZmHOX2a(1)                         --------->ANAC46  --------->ANAC46         <------ZmHOX2a(2)                               --------->ANAC58   -------  --------->ANAC58         =============HOX2a_HOX2a                        <---------ANAC55(2)-------  --------->ANAC58        --------->ARR11(3)                               --------->ANAC58 --------- ------->ANAC46           <---------ARR11(3)                          <---------ICU4 --------->ANAC58 ----->ANAC46            <---------At4g35610                       <---------At4g35610--------->TOE2(2) --->HSFB2a(2)          ----------->ARR10        <---------At5g28300 <---------YAB1  --------->ANAC46 ----HSFB2a(2)    --------->MYB46(3)            <-----------GT1  <-----------RAV1(2) --------->ANAC58 ---GT1         --------->MYB52(1)     <----------DOF2<---------ETT(2)--------->ATHB12--------->TOE1(2)   caagacgcaagacaaattcaacggctcagatcatcctgttcctttctaatttaccgtagacacgagcacagatgattacgaaatcaaacgtaagaaacga  9302800                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                     *TSS                     <---------ARR14(2)                  <------NtERF2                 ------>NtERF2                --------->DEAR3(1)                <---------DEAR3(1)                ----------->HVH21               --------->ATERF1(1)               ------>NtERF2               <------NtERF2               --------->RAP2.3(1)              ------>NtERF2              <---------ATERF1(1)              <---------RAP2.3(1)                                         <---------ANAC58              --------->LBD16                                             <---------ANAC58             <---------DEAR3(1)                                         --------->ARR11(3)             <---------ANAC46                                          <------NtERF2         <---------At4g35610                                        --------->At4g35610         --------->At4g35610                                        <------NtERF2        <-----------RAV1(1)                                        ----------->RAV1(1)     <----------DOF2 --------->ARR14(2)                          --------->At4g35610 -->ANAC58  <---------LBD16                                      <---------At4g35610               -- -->ANAC58  --------->At4g35610                               --------->ZAT14                 <------ >MYB52(1)  <---------At4g35610         ----------->HVH21     <---------ZAT14                 -------   aacaaaacttttgctgcggcgacgatcggcaattcgaaatggacgacggagaaggcatggaaactgcagcggcagagcttgagagactccaaattgaaat  9302900                                                             <------NtERF2                                                    --------->At4g35610                                                    <---------At4g35610                                                    <---------ZAT2                                                    --------->ZAT2                                                 <---------At4g35610                                                 <---------ZAT2                                                 --------->ZAT2                                                 --------->At4g35610                                                <-----------RAV1(1)       <---------ARR11(3)                <---------GLK1(1)  ------>NtERF2       --------->ARR11(3)                --------->GLK1(1) --------->DEAR3(1)       --------->ANAC58      <---------GLK1(2)                 <---------GLK1(2)<---------ATERF1(1)        --------->ANAC58   --------->ANAC46                  --------->ANAC46    <-----------HVH21 <---------MYB46(3)    ---- ---->ZmHOX2a(1)                   ----------->RAV1(1)  --------->DEAR3(1)<--------P--------->ANAC46 ---GLK1(1)                   ---------->ARF1 <---------At4g35610        <---------MYB52(1)      ---- -->GLK1(1)                <----------DOF2    ------>ZmHOX2a(1)      --------->MYB52(1)    <---------   cctccacaaaatctccattcttgagagctcttttctcccacagaattcctctgctgctccgtcgccttctctaccggttgatgaaaacgaaactgtgact  9303000                              <---------DOF5.7(2)                            --------->DOF5.7(2)                           <----------DOF2                          <---------ANAC46                         <------NtERF2                        ------>NtERF2                        <---------RAP2.3(1)                        <---------ORA47(2)                        <---------DEAR4(2)                        <---------ATERF1(1)                        <---------ERF1                        <---------RRTF1(1)                       <---------DEAR3(1)                       --------->DEAR3(1)                       <---------RAP2.3(3)                       --------->ATERF1(2)                                              <-----------HVH21                       <---------RAP2.3(2)                                         <-----------ARR10                      <---------ABI4(1)                                            ------->TEIL                      --------->ATERF1(1)                                          --------->ARR14(2)                     --------->LBD16                                               --------->GLK1(2)                    <---------DEAR3(1)                                             <---------ARR14(2)     --------->ANAC46<---------ATERF1(1)                                          <---------CCA1(2) ----->ANAC58       <---------RAP2.6(2)   <----------DOF2                      <---------HSFB2a(2) ----->ANAC58      <---------LBD16      --------->At4g35610                    --------->HSFB2a(2) --HVH21           --------->SPL7       <---------At4g35610         <---------YAB1<---------GLK1(2) <   cgcctctccaccattctccagtccggcggcgttaacgacttctgcttcaagagagttgctaccgattactatgactggcctctcgaatctcgtcgcgacg  9303100                <---------ETT(2)                --------->ETT(2)           ------>ZmHOX2a(1)          --------->TOE2(3)      --------->ATERF1(1)     ------>NtERF2                                           <---------AHL20(2)     --------->ABI4(2)                      <---------MYB52(1)                               <-------     <---------ATERF1(1)                  <---------HSFB2a(2)<---------YAB1                  --------    <---------DEAR3(1)                    <---------------AtSPL3                          <---------AHL20(2)   <------NtERF2--------->WRKY38(1)       --------->HSFB2a(2)--------->AHL20(2)   <---------ANAC46 <---------DEAR3(1)                       --------------->AtSPL8              --------->ARR14(2) ---------HSFB2a(2) --------->AtMYB61     <---------------AtSPL8              <---------ARR14(2)   ttctcggcgcttcctcagtcgaccatctctgcaagagtattgttctggtacttcaattgctatataattgaattctatcggatttagtgtattttatgga  9303200        <-----------ARR10           <---------ZAT14        <---------ARR11(3)          --------->ZAT14   <---------ANAC58        --------->ARR11(3)      --------->ZAT6        <---------ANAC58        --------->At4g35610  --------->YAB1       <---------YAB1  XXXXXXXXXXXXXXXXXXXXX>MIR777  ------>ZmHOX2a(1) --HSFB2a(2)         --------->ANAC55(2)     ------->TEIL        <-----------GT1             -------- ->HSFB2a(2)         <---------ANAC55(2)    <---------GLK1(2) --------->MYB52(2)         <-----------GT1   acaattttaaaatcttcgttgatatgtgattgtgacactacacattgaatctctgtgcctgtgtttgtttcctcactagatgctgactatattacaggtt  9303300  Previous    Next  AGI:  At4g16510.1    Description:  YbaK/prolyl-tRNA synthetase-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO16490.1); contains InterPro domain YbaK/aminoacyl-tRNA synthetase associated region (InterPro:IPR007214) Range:  from: 9302821    to: 9305070    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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