Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Publications Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   1        10        20        30        40        50        60        70        80        90        100                               <----------DOF2                      <-------TEIL                   ----------->GT1                  <---------------AtSPL8                  --------------->AtSPL8                  <---------------AtSPL3                  --------------->AtSPL3                ---------->DOF2   <--------P                                               ----------   tatcaattcagattaagaaaaaggtacatttctttggtagatgttatgactgctcataaatttataaaaacgaacagaaatagttttaaaaaaaaaagaa  8708400                                                                        <----------DOF2 >DOF2                                       <-----------GT1         <-----------GT1   atattataatctaagtgaaaacatgattgaaaacaaatgatagtatgttacacaatttctcgttcatatattatctttttaaaacaaaccaaaaacttgc  8708500                                       <--------HAHB4<----------DOF2                    <-------TEIL                            <-------TEIL      <-----------GT1                    <-------TEIL    <<<<   acagtagtttaatgaataatcactaataaattcatatactattattatatactccctttttatagaccacaaaaatgctatgattcatgattcattctag  8708600                                                                                            ---------                                                                                ------>ZmHOX2a(2)                                                                               <------ZmHOX2a(2)                                                                      =================HOX2a_HOX2a                                                                      ================HOX2a_HOX2a  <-                                                                      <------ZmHOX2a(1)--------->ALFIN1 <<<ZML2      ----------->HVH21                                      <----------ID1 <-----------RAV1(1)   aacgtgattgtgatatgtgacaatgagcgagtcatactagtcaactactcgaaacttgtgtatcaaacatgaggacgagagatcgtctggtggagggaaa  8708700                                                                   --------->O2                                                                   <---------O2                   <------MYB46                                    --------->TGA1a           <-----------GT1                                    <-----------GT1 -->GT1-------->ATHB1   ------>ZmHOX2a(1)            ------------>CBF                               < ----------GT1     <------MYB83                    ----------->GT1 <---------TGA1a     ------------>CBF   ataactaaattattgacaatttggtcctctagggacactcacatcaaaccaataggtcaatatttttccacgtgtacaaccagtttaatgacaatttcat  8708800                       -------->ATHB1                                 ----------->GT1            ----------->TBP    ----------->TBP                    ---------->DOF2          <----------DOF2    ------>ZmHOX2a(1)                ---------->DOF2   --------->ALFIN1 -----------GT1   ------------>CBF              *TSS      <----------ID1 ---------->DOF2       ------   aatatccatttgctttaaataacaatcattcctatataaacctaaatcttgaacacaagagagacaaagaaagagtaaagatgtgtagagggtttgagaa  8708900                                                                                               <-----                                                                                              ------>NtERF2                                                                                   <------NtERF2                          <------ZmHOX2a(1)                                        ------>NtERF2                ----------->RAV1(1)        ------->TEIL---------->DOF2       <----------DOF2 <------- ---->DOF2      <<<<<<<<<<<<<<<<<LFY      <---------AtLEC2       <--------P  ----------------------->TaNAC69(2)   agaagaagagagaagaagcgacaatggaggatgccaaagactatgcacggagagtcacaaagctccggtaagctgtgagctttgcggcgagaacgccacc  8709000                                ================HOX2a_HOX2a                         <----------DOF2                        --------------->AGL15                        <---------------AGL15                       <-----------------AGL1                       <-----------------AG                                                         -                       ----------------->AGL1                                                  ------                       ----------------->AG     <---------PCF2                           <------NtERF2 -NtERF2            <----------DOF2      <------ZmHOX2a(2)                              ------>NtERF2 --ALFIN1        ------->TEIL   <------ZmHOX2a(1) <-------TEIL  <-----------GT1      ------>NtERF2<--   gtgtattgtgaggcagacgcagctttcctttgtaggaaatgcgatcgatgggtccattctgctaattttctagctcggagacatctccggcgcgtgatct  8709100      <-----------HVH21 <---------ALFIN1 ---------->HVH21                                        <-----------GT1 >ZmHOX2a(2)     >>>>>>>>>AtCCA1                 <-----------RAV1(1) -------AtLEC2   >>>>>>>>>AtLHY     <---------------------WRI1        <------ZmHOX2a(1)   gcacgacctgtcggaagctaactcgtcgatgtcttgtcggtgataattttaatgttgttttaccggagataaggatgatagcaaggattgaagaacatag  8709200                                                                           ----------->GT1                                                                          <------MYB83                                                                          <------MYB46                <----------DOF2                                         <--------P   tagtgatcacaaaattccctttgtgtttctctgattttatgttttgtttttcgcgtaattaagattaaatattggtagggttttttctctggaaatgttc  8709300  Previous    Next  AGI:  At4g15248.1    Description:  DNA binding / zinc ion binding. similar to zinc finger (B-box type) family protein [Arabidopsis thaliana] (TAIR:AT3G21890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41663.1); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926) Range:  from: 8708848    to: 8709373    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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