Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             --------->ARR14(2)                                                           <---------ARR14(2)                                                        <---------ANAC46                                                        --------->ANAC55(2)                                                        <---------ANAC55(2)                                                      --------->MYB52(1)                                                     ----------->HVH21                                                     ----------->TGA1                      ----------->HVH21        ----------->HVH21               <------ZmHOX2a(1) ---------ID1<--------P             <----------DOF2  --------->ALFIN1   <------ZmHOX2a(2)     ------- ----->DOF2 <-------GAMYB<---------ANAC46  <------ZmHOX2a(2)            ==============HOX2a_HOX2a   aaggccaagttttgggttgattcagtgactggttcaagctttgggatcagtgaaggtgacggatttagagacggatcaagaggaatgtgagaagaaccca  7826600                                                                                                -----                                                                                 --------->ANAC58             <-----------------------TaNAC69(2)                                  --------->ANAC58<---          ---------->DOF2           <---------YAB1  --------->CCA1(2)       <----------DOF2    <----- ---------->AGL3         ----------->HVH21 --------->GLK1(1)               <---------DAG2     <------   ttttttgcaacgagaagcgaaatgggtttgacgagtttatcagagaaatcgaagaaatgggttttgtttggagaacacctttcaagctaaatccatggcg  7826700                                                            <----------DOF2                         <                                <-----------ARR10           --------------->AGL15              ------                                --------->GLK1(2)          <---------ANAC58                  --------      <---------ARR11(3)       <---------GLK1(2)           <---------ANAC58                 <--------      --------->ARR11(3)  ------>ZmHOX2a(1)           <---------GLK1(2)       --------->ARR11(3) <--- ---->LBD16        --------->AHL20(1)                 --------->ARR14(2)  ----------->GT1 <---------ICU4 ---NtERF2         --------->ARR11(3)               ----------->ARR10 --------->DAG2      --------->YAB1 ----ANAC46        <---------ARR11(3)            <----------DOF2     ---------->DOF2     <---------ATHB51 ---LBD16          <---------AHL20(1)         <-----------GT1 --------->AHL20(2)         --------->ICU4   gagaagaagctcttacacaaatattttcctacagaatctaatgtgttttttctttagatttgcttttaatataaagttgtgatattgagaaattatgata  7826800                                                                                     <------ZmHOX2a(1)                                                                                   <---------TOE2(3)                                                                             ===============HOX2a_HOX2a                                                                             ------>ZmHOX2a(2)                                                                            --------->GLK1(1)                                                                            <---------GLK1(1)                                                                            ================HOX2a_HOX2a  --------->KAN4(2)                                                         <------ZmHOX2a(2) <---------ICU4                                                            --------->ARR14(2) --------->KAN4(1)         --------->AHL20(2)                              <---------AGP1  ---------- <---------KAN4(1)    <------NtERF2                                        <---------ARR14(2) ---------YAB1       ----------->GT1                                       <---------ARR11(3) --->CCA1(2)         --------->LBD16                                       --------->ARR11(3) ->YAB1             --------->RAP2.6(2)                                    --------->ARR14(3) -YAB1             <---------LBD16         <---------CCA1(2)               <---------ARR14(3) ------YAB1 --------->AHL20(2) ----------->GT1 <----------DOF2 --------->TOE2(3)<----------DOF2   cgattattccaaaaaaaaatagccggaaaaaaaatgaaaaatttcataccttttatgtgttgaaatctaaatttgaagatctctttaggatgaaaaagag  7826900                                                                          <---------ALFIN1                                                                        <---------ALFIN1                                                                        --------->AtMYB61                                              <------MYB46(1)          --------->ANAC58                                              <------MYB83             --------->ANAC58                                              <---------ANAC46         --------->ANAC46                                             <---------AtMYB61       --------->ANAC58                                  <---------ANAC46                   --------->ANAC46                                  <---------ANAC58                   --------->ANAC58                                  <---------ANAC58                 <---------ALFIN1                    ----------->GT1 --------->ALFIN1             ------>MYB46(1)                 <---------LBD16<---------MYB46(3)      *TSS   <---------MYB59                      -        --------->ANAC58       <---------AtMYB61<---------ANAC46 ------>MYB83             <---------ANAC46 >DOF2  --------->ANAC58 --------->ICU4  --------->ATHB12      --------->AtMYB61<---------MYB52(1)  -   ctctcttggtactcaaatttctgggtaaaaatggtggtgtgtttgatttggtgtataaggccagaccaaacacaccacacccgtttattttggtttgtag  7827000                <-------MYC3        <---------bZIP60(1)        <---------ANAC46        <---------ANAC58        ----------->GT1        --------->bZIP60(1)        <---------ANAC58     --------->ALFIN1                                                                    <---------AHL20(2)   --------->O2 ------->MYC3               <---------AHL20(2)                            --------->AHL20(2)   <---------TGA1a                     --------->ARR11(3)                                <---------AHL20(1)   <---------bZIP60(2)                 <---------ARR11(3)                                --------->AHL20(1)   --------->TGA1a                     <---------AHL20(1)                               =============   <---------O2 <-------MYC2         <---------AHL20(1)                              <---------AHL20(2)   <---------ANAC58                  --------->AHL20(1)                          --------->AHL20(1)   <---------ANAC55(2)            --------->AHL20(2)                             <---------AHL20(2)   <---------ANAC55(1)         --------->YAB1                              --------->AHL20(2)   --------->ANAC55(2)       --------->AHL20(2)                            <---------AHL20(2)    <---   <---------ANAC58          --------->AHL20(1)      --------->ICU4   <---------YAB1 --------->AHL20(2)   <---------ANAC46        --------->ICU4  <---------YAB1      <---------ZAT14   --------->AHL20(2)  ----------->STF1    <------ZmHOX2a(1)--------->AHL20(1) <---------ZAT14 --------->AHL20(2)   <----- <---------TGA2(2)  <---------TOE1(3)<---------AHL20(2)<------------CBF  <---------YAB1 <------------ ---------->TGA1------->MYC2<---------ICU4<---------AHL20(2)   --------->ZAT14  --------->AHL20(2) ---------->HVH21 <-------TEIL<---------YAB1       ---------->DOF2    --------->ICU4--------->AHL20(2)   cgatgacgtgtcgtaacacgttcaggataaatattataaaatatttttattagaaaagattgcagtatagagattattaaaaaaaaattaataaatttag  7827100                      ----------->GT1                 <---------AHL20(2)                <---------ARR11(3)                <---------AHL20(2)                --------->AHL20(2)                <---------AHL20(1)                --------->AHL20(1)           --------->AHL20(2)            --------->YAB1        <---------AHL20(2)      <---------YAB1        --------->AHL20(2)     --------->AHL20(2)       <---------AHL20(1)      <---------AHL20(2)       <---------AHL20(2)      --------->AHL20(1)    <---------TOE2(3)        <---------AHL20(2)       --------->AHL20(2)      <---------AHL20(1)    <---------TOE1(3)       <---------AHL20(2) --------->YAB1 --------->ARR11(3)   <---------AHL20(2)           <-----------ARR10 ==============================MADS_MADS<---------YAB1            <---------ARR11(3) ---ZmHOX2a(1) --------------->AGL15<---------AHL20(2)            --------->ARR11(3)              --- ----TOE2(3)   <---------------AGL15--------->AHL20(2)           --------->RVE1(1)--------->AHL20(2) ---AGL15  <---------AHL20(2) --------->YAB1  ----------->GT1    --------->CCA1(1)<---------AHL20(2)   gaaacataatttttttaatatatttagtaaaattataattttataatatggaaataaggttttccaaatatctaagttttttatttttttaaaatttgaa  7827200                             <----------DOF2                      <---------AHL20(2)                               --------->ARR11(3)       -----                   <---------AHL20(2)                                  <---------ARR11(3)       <----              --------->AHL20(1)                                      <---------CCA1(2)         -----              <---------AHL20(1)                                --------->ARR11(3)              <----              <---------ARR11(3)                                <---------ARR11(3)    <-----------GT1       <----------DOF2--------->AHL20(2)                  <---------ANAC58          <---------AHL20(2) <---------ICU4   --------->AHL20(2)                      <---------ANAC58<----------DOF2      ------ ------>YAB1  --------->AHL20(2)                        <-----------GT1<---------AHL20(1)<----------DOF2   taaaaatttctttctatatattatataatttctttctattttttaaacttgaataatttttcttgatatctaatatctttctgtattttaactttgaata  7827300                          --------->ARR14(2)                          <---------ARR14(2)            --------->KAN4(2)           --------->KAN4(1)                          <-----------GT1           <----------TaMYB80          <---------AHL20(2)           <---------KAN4(1)      ===================================================================          ---------->TaMYB80      <-----------------AGL3          <---------KAN4(2)<---------RVE1(1)   --------->TOE2(3)   <----------DOF2        <---------GLK1(2)  ------->TEIL           --------->ARR11(3)              - ---->AHL20(1)      <---------GLK1(1)  --------->ATHB12        --------->AHL20(2)                   - -----AHL20(1)      --------->GLK1(1) --------->AHL20(2)       <---------AHL20(2)               ----- ---->AHL20(2)  <---------HSFB2a(2)<---------------AGL15 <----------DOF2                        <---- -----AHL20(2)  --------->HSFB2a(2)--------------->AGL15 <---------DAG2       <----------DOF2   ----- --->AHL20(2)  <---------LBD16  <-----------GT1--------->TOE1(3)    <---------ARR11(3)          <----   aatttcttttggtatattctggatatcggatttttttctatttattgaaccttgaataacttttttttaatatctaatttcttttttttttgaaacaata  7827400    --------------->AGL15    <----------DOF2 <---------AHL20(1) --------->ARR11(3) --------->AHL20(1)                              ---------->DOF2 <---------ARR11(3)                            <---------YAB1 ===================MADS_MADS             <---------ICU4 --------->ATHB12 -------->RVE1(1)                 <---------TOE2(3)      <---------AHL20(2)                     ----- -------->CCA1(1)                --------->YAB1<---------ANAC55(2)                            <------ ---->AHL20(1)             <---------ALFIN1    --------->ANAC58   --------->DAG2              ------- -----AHL20(1)           ----------->RAV1(1)   --------->ANAC58  ---------->DOF2            --------- ---->AHL20(2)        --------->ETT(1)   --------->ICU4 --------->AHL20(2)          ----------->GT1 -----AHL20(2)     --------->ALFIN1 <------ZmHOX2a(1)   --------->ICU4----------->GT1      ----------   aaatatctttatatcgtaagtgtgtcgcaacacattcaggataaatattacgaaagtatttattagaaaaagtcgtgatatagaaattgtaaaaaaagga  7827500  Previous    Next  AGI:  At4g13460.1    Description:  SUVH9 (SU(VAR)3-9 HOMOLOG 9); histone-lysine N-methyltransferase/ zinc ion binding. Identical to Probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9 (SUVH9) [Arabidopsis Thaliana] (GB:Q9T0G7); similar to SUVH2 (SU(VAR)3-9 HOMOLOG 2) [Arabidopsis thaliana] (TAIR:AT2G33290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71495.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81444.1); contains InterPro domain Pre-SET zinc-binding region; (InterPro:IPR007728); contains InterPro domain SRA-YDG (InterPro:IPR003105); contains InterPro domain Pre-SET zinc-binding sub-group; (InterPro:IPR003606); contains Range:  from: 7824030    to: 7826956    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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