Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         ------>NtERF2 --------->TOE1(3)                                                                       <---------ATERF1(1)             <---------DEAR3(1)                                       <---------ETT(1)           --------->CCA1(2)                                          ----------->HVH21        --------->ANAC46                                              --------->DEAR3(1)    <-----------GT1                                    <---------TOE2(3)    ---------->DOF2 <---------ICU4 <---------DEAR3(1)         --------->ATHB12          --------->ATERF1(1) --------->ANAC58 -------->AHL20(2) ----------->HVH21 --------->HSFB2a(2)             --------->DEAR3(2)  --------->ANAC58 -------->ICU4 <------NtERF2         <---------HSFB2a(2)     ----------->HVH21      ----------->RAV1(2)   catttattacaagagacggcgatgacaacgacttctcttctagactcattagacgttgaggcaatgacagggccgacccaaagtaaacctgaagcaaaaa  7641000               <---------AHL20(2)             ----------->GT1              --------->AHL20(2)         --------->YAB1            --------->TOE2(3)           <-------TEIL           --------->ATHB12         --------->AHL20(1)           <--------HAHB4           <---------ARR11(3)       <-------TEIL           <---------ICU4         <---------AHL20(1)     <---------TOE1(3)                          -           --------->YAB1         --------->AHL20(1)<---------ICU4                                <<<          <---------ATHB12       --------->AHL20(2) -------->HAHB4                     --------->GLK1(2)          --------->ICU4       --------->AHL20(2)   --------->YAB1            --------->REM1(2)   <--  --------->AHL20(2)         <---------AHL20(2)    <---------ATHB51      <---------YAB1--------->ARR14(2)  <---------AHL20(2)         --------->AHL20(2)    --------->ICU4   --------->ANAC46   <---------ARR14(2) --------->AHL20(2)  ----------->GT1--------->ARR11(3)   <---------TOE2(3) <----------DOF2  <--------   caattttattccatcattaaatatagtttaaaaaaatatatattcataatgtaataatgaaggttcaaacacatcatctttgtagagagaatccagctat  7641100         --------->TOE2(3)       -------->P   ------>MYB46(1)   ------>MYB83--------->AHL20(1)                                                     <----------DOF2  --------->WOX13(1)          --------->YAB1                                     <---------ANAC58 -------->MYB46(3)    ----------->GT1                                            --------->ANAC55(2) <<<<<<GT-1    <---------AHL20(1)                                                <---------ANAC58 ---------GT1  <---------AHL20(2)              <---------YAB1                   <---------LBD16 -At4g35610    --------->AHL20(2)     ------>ZmHOX2a(1)    --------->At4g35610 <-----------GT1   taaccaatctaccacaataaatttctgtaaaatgatactcctaaactttgttatagtcatttgctgcataaaactcatgttttacgggctttagccttgg  7641200                           ------>MYB83                           -------->P                          --------->MYB55(1)                          --------->MYB52(1)                         <---------ALFIN1                         --------->DEAR3(1)                         <---------MYB111(2)                         <---------MYB46(2)                         <---------MYB111(1)                         --------->MYB46(3)                         <---------MYB55(2)                         --------->AtMYB61                   --------->YAB1                        --------->MYB46(3)                 --------->ANAC58                  <-------               --------->KAN4(1)                           --------->ANAC58                  --------               <---------KAN4(1)                       --------->ANAC58                      <-------              <---------KAN4(2)<---------MYB52(1)      --------->ANAC58     --------->DAG2  <-------- ------>MYB46(1)--------->KAN4(2)                      --------->ANAC46   ---------->DOF2  --------->YAB1 ------>MYB83--------->YAB1------>MYB46(1)      ---------->DOF2  ---------->DOF2 ---------->DOF2   accagcctgcaacgagaataatctccaccaaccgttttcttcgatggcaaataagcgacgcaagtataaaagaaaaaaaaggcaaaagttctaaaataat  7641300                                                                                     <---------DDF1                                                                                     ----------->RAV1(1)                                                                                    ------->GAMYB                                                                                    --------->At1g77200        <------MYB83                                                                --------->DEAR4(1)        <------MYB46(1) <---------ICU4                                              --------->DREB2C(2)        ----------->GT1 -------->ATHB1              --------->ARR11(3)              --------->DEAR3(1)       --------->MYB46(2)                           <---------AHL20(2)              ----------->HVH21       --------->MYB111(1) <-----------GT1          --------->AHL20(2)             <------NtERF2       --------->MYB59  <--------HAHB4              <---------AHL20(1)             --------->MYB46(3)       <---------AtMYB61--------->YAB1      ----------->GT1        --------->AtLEC2--------->DEAR3(2)       <---------MYB46(3) <---------YAB1  ------->TEIL     <------------CBF   --------->ANAC58       --------------->AtSPL8     <---------MYB52(1)--------->AHL20(1)        --------->ANAC58       <---------------AtSPL8    <-------GAMYB      <---------ARR11(3)        --------->ANAC46     <---------MYB52(1) --------->ATHB51<---------ZAT14  --------->AHL20(1)  ------->MYC3 --AHL20(2)            --------->ICU4<---------ANAC46<---------AHL20(2)      ------->MYC2  ---------- ->AHL20(2)            <---------ATHB51 --------->ZAT14  <---------AHL20(2)  <-------MYC3--------->At4g35610 --ATHB51              <---------ATHB12 --------->ZAT18  <---------AHL20(1)  <-------MYC2<---------At4g35610 -AHL20(1)         ------------>CBF  <---------ANAC55(2) --------->AHL20(2)*TSS   ------>NtERF2<-----   tcaaccggtttggtacaaatttccaattattactcggttaagtgaaccgtttaatatattttattgttcatacaaaacacatgccaccgacatctgactt  7641400                                                  --------->ANAC58                                                  --------->ANAC46                                                 --------->SPL7                                                <---------SPL1(1)                                               <---------SPL1(2)                                               <---------SPL7                                               --------->LBD16                                              <---------ANAC58                                              <---------ANAC58  --------->TOE1(3)                                     --------->YAB1             --------->TOE2(3)                           <--------HAHB4    <---------------AtSPL3                          --------->ICU4     <-----------------------TaNAC69(2)                          <---------YAB1     --------------->AtSPL3                        --------->YAB1       --------------->AtSPL8                       <-------TEIL <---------YAB1--------->ANAC58                <---------ICU4    <---------AHL20(2)     <-----------GT1                --------->YAB1   --------->AHL20(2)     --------->AHL20(2)               <---------YAB1 --------->AHL20(2)--------->SPL1(1)------>ZmHOX2a(1)                 <-               <---------ATHB12  <---------AHL20(2)     <---------AHL20(2)                     <<<<<< ->HVH21       --------->ICU4<---------YAB1------------------>SPL14                 <---------ANAC58 -----DOF2   --------->YAB1<---------ICU4  <-----------GT1<-----------GT1           <---------ANAC58   ttaaaacagaaccagtaatcatcgattcattattatttattatagtttccgtacgaaattaaacttccttaaaaaaaacctagtttccttgtgcttcttc  7641500                                         --------->ANAC46                                       <<<<<<<<<GATA-3                                       <<<<<<<<<GATA-1                                       <<<<<<<<<GATA-2                                       <<<<<<<<<GATA-4      <<<<<<<<<TBF1                        ----     <------ZmHOX2a(2)                --------->ARR14(2) <<<<<<<<<TBF1                --------->YAB1 --------AtLEC2                       ------->TEIL    <<<<<<<<<TBF1           --------->WOX13(1) <--- <<<TBF1                         <---------AtLEC2  <<<<<<<<<TBF1<---------AtLEC2     <---------ATHB12   ttcatggatcatcaacatagctccgattcacctatgcatgaatccacaacttcttcttcttcttcttcatggagtttcggcaatctaatcaaaaccctat  7641600                           -------->P                          ==================================HOX2a_HOX2a          --------->GLK1(2)------>MYB46(1)          <---------ARR11(1)          --------->ARR14(2)          ------->TEIL    ------>ZmHOX2a(1)          <------ZmHOX2a(2)          <---------ARR14(2)--------->DEAR3(2)      <---------ARR14(2)         <---------ARR14(1)------>MYB83<---------AtMYB61         <---------GLK1(2)===================================HOX2a_HOX2a           --------->TOE1(2)    --------->ARR14(2)  ------>ZmHOX2a(2)     --------->ARR14(2)               --------->YAB1    --------->GLK1(2)  <------ZmHOX2a(2)      <---------ARR14(2)              <---------ATHB12    <---------ARR14(2)<-----------ARR10--------->MYB59------>ZmHOX2a(2)  --------->TOE2(3)         <- ----->ETT(2)         <---------ARR14(2)<------MYB46(1)          ---------->DOF2   ----------->HVH21 ------ETT(2)         --------->ARR14(2)<------MYB83--------->ARR14(2)   --------->TOE1(3)  ---------   cgacaaaatccgaatctgtaatcggatcctaccgtcgcgatttggtcgaattcggatccgaattgaagaaagaaacctcaataatccgacgagtagcttc  7641700                                                                                          --------->REM1(2)                                                                                         --------->ALFIN1                                                                                      <------NtERF2                                                                                     ------>NtERF2                                                                                    <---------ALFIN1                                                                                    --------->DEAR3(1)                                                                                   ----------->HVH21                                                                                   --------->ERF1                                <---------MYB52(1)                                 <---------ABI4(2)                               <-----------HVH21                                   --------->RAP2.3(1)                              --------->ANAC46                                     --------->ATERF1(1)                            ------>NtERF2                                          <------NtERF2                            <---------ATERF1(1)           <------MYB83            ------>NtERF2                           --------->DEAR3(1)            <---------MYB46(3)       --------->ABI4(2)                          --------->RAP2.3(1)            --------->MYB59          <---------RAP2.3(1)                          --------->DEAR4(2)             --------->MYB46(2)       <---------ATERF1(1)                          <------NtERF2   --------->GLK1(2)                      --------->ANAC46                          --------->ATERF1(1)           <--------P               --------->PCF2        <---------GLK1(2)<---------RRTF1(1)             <---------MYB55(1)       <---------DEAR3(1)     <---------MYB59     ------>NtERF2   <---------GLK1(2)<------MYB46(1)        --------->DEAR3(1)    <---------ANAC55(2)  <---------ATERF1(1)       --------->ARR14(2)           --------->RAP2.3(1)    ----------->RAV1(2)  <---------RAP2.3(1)       <---------ARR14(2)       --------->ARR14(2)    --------->ANAC55(2) <---------RAP2.3(2)    --------->HSFB2a(2)          <---------ARR14(2) <----- --------ICU4 <---------HSFB2a(2)        --------->ARR14(2) --------->WRKY18(1)<---------RAP2.3(1) -- >At4g35610   --------->HSFB2a(2) <---------DEAR3(2)   <---------MYB52(1)  <---------GLK1(1)   ------   aagattacctgattctctcgaaattggcgcctccgtcgcttcggaatctctcgaatcggtaggtcaagttatcgacgatatcggcgccaccgtgtggaaa  7641800                                                    <---------SPL7             --------->TOE1(3)       <---------TOE2(3)                          --------------->AtSPL3       <---------DAG2       <---------YAB1        --------->GLK1(2)    --------------->AtSPL8       --------->TOE2(3)       <---------TOE1(3)    <---------GLK1(2)   ------------------>SPL14    <-----------GT1 --------->MYB46(3)        <------ZmHOX2a(1)   ----------->HVH21       <-------GAMYB ----GLK1(1)             --------->ANAC58    --------->YAB1           <---------ANAC46 ------->MYB52(1)        --------->ANAC58  <---------ARR14(2)         <---------MYB46(3)            - --->GLK1(1)           <--------P          --------->ARR14(2)        ---------->ID1            <-----   tcaacggctaagattatttctcgtggtaaggaatctttagaaccgaatcgtgaccgtacaaatcaggttttgtcgttgaaaccttatcgtcgttttgaga  7641900  Previous    Next  AGI:  At4g13110.1    Description:  BSD domain-containing protein. similar to BSD domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G03350.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ51910.1); contains InterPro domain BSD (InterPro:IPR005607) Range:  from: 7641375    to: 7642595    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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