Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <---------AHL20(1)                                                                    --------->ARR11(3)                                                                    <---------AHL20(2)                                                                    --------->AHL20(1)                                                                   ==================================                                                                   <---------------AGL15                                                                  <---------TOE2(3)                                                                <---------AHL20(2)                                                                --------->AHL20(2)                                                               --------->ICU4                                                               <---------YAB1                                                             <---------ICU4                       <--                                                            <---------ATHB51                  -------                                                            --------->ICU4                    -------                          <---------YAB1                    <---------AHL20(2)                <------                         <---------AHL20(2)                 --------->AHL20(2)                <------               <----------DOF2                           --------->AHL20(2)                  --------            <-----------GT1<---------AHL20(2)           <---------ATHB12                ------------- --------YAB1  <---------DAG2  <---------AHL20(2)       --------->AHL20(2)         <---------MYB46(3)   tatttttgagtattttactttttctatttttattttaaaatttttgattttttgatcaataaataattaatattttgggtatttttggttaccaaaaata  5828200                 <---------YAB1      <------MYB46(1) <---------AHL20(2)      <------MYB83   --------->AHL20(2)                          <---------AHL20(2)     --------->MYB59 <---------AHL20(2)                         --------->AHL20(2)     --------->MYB46(2)                                         <---------AHL20(2)     --------------->AtSPL3                                 <---------YAB1     --------------->AtSPL8                               -------->ATHB1   <---------MYB52(1)<---------AHL20(1)                   --------->YAB1 =====MADS_MADS <---------AHL20(1)                        --------->ATHB51 ---------GT1   <---------AHL20(2)                        <--------HAHB4 -->ARR11(3)    --------->AHL20(1)     --------->YAB1     <---------ICU4                          <-- -->AHL20(1)    --------->AHL20(2)     --------->AHL20(2) --------->AHL20(2)                  <------ ---AHL20(1)   --------->YAB1          <---------AHL20(2) <---------AHL20(2)                  <------ ---ARR11(3)  <---------ATHB12      --------->YAB1       --------->ICU4                 <----------DOF2 ->YAB1       <---------ATHB51     <---------AHL20(2)    <---------ATHB51           <---------GLK1(2) ---->AGL3  --------->WOX13(1)    --------->AHL20(2)     <---------ATHB12<------------------------ANAC81   tttcagttcggtaccaattataatttttttttgttatataataatatagtatacatccaattatttttaaatttttgattttgttcgattctttttgctt  5828300                                                                                            ---------                                                                                            <--------                                                                                    <---------ANAC46                                           --------->REM1(1)                     --------->ATERF1(1)                                          ------>MYB83                           <------NtERF2<------                                          ------>MYB46(1)                       <-----------HVH21                              <---------WOX13(1)                               --------->bZIP60(1)                           <---------AHL20(2)                                  <---------ANAC46 -------DEAR3(2)           --------->AHL20(2)                                  <---------ANAC58   <-- ---ANAC58   <---------HSFC1(2)         <---------MYB59    ----------->HVH21   <---------ANAC58   --- ---ANAC58   --------->HSFC1(2)  <---------ANAC46    --------->YAB1            <---------DEAR3(1)<---   cggttccaattcagtagcttcgattcagtttaattgcctagacctacattttctattagaactgacacaaaaacaaaattggcgtcgcttataaggtcta  5828400                                                  <---------MYB46(3)                                                  <---------DEAR3(2)                                                 <---------DEAR3(1)                                                 <---------TOE2(2)                                              --------->O2                                              --------->bZIP60(1)                                              <---------O2                                              <---------bZIP60(1)                                              <---------TGA1a                                              --------->TGA1a                                           =============MYC_MYB         <------MYB46(1)                   --------->TOE2(2)         <------MYB83                      --------->DEAR3(1)       =================================================MYC_MYB       <--------P                          ----------->HVH21     --------->ATHB12                      ------->GAMYB --------->ARR11(3)                       --------->MYB46(3) <---------ARR11(3)                       --------->DEAR3(2) >ARR11(3)   ----------->RAV1(2)        <-----------GT1 -ARR11(3)   <---------At4g35610   <---------ARR11(3) ---ETT(2)   --------->At4g35610   --------->AHL20(1) -------------AGL15                --------->AHL20(2)                    --------->ANAC58 ------------>AGL15               <---------CCA1(2)                      --------->ANAC58 --------------AGL3     --------->YAB1  --------->MYB52(1)    --------->LBD16           --------->ARR11(3)   caatatatggttggcctctggcccaatagtaagcccatatattaaccgacgtcggtttatagccccgataaacacaaacaatatagataagatagtttct  5828500                                        <---------ANAC46                                        <---------ANAC58                                        <---------ANAC55(2)                                        --------->ANAC55(2)                                --------->LBD16                               <---------HSFC1(1)                               --------->HSFC1(1)                               <---------HSFB2a(2)                               --------->HSFB2a(2)                          --------->HSFB2a(1)                          <---------HSFC1(2)                          <---------HSFB2a(1)   <------------CBF<---------ARR14(2)                          --------->HSFC1(2) ------------>CBF   --------->ARR14(2)                     --------->HSFB2a(2)<---------ANAC55(1)     <-----------ARR10                     <---------HSFB2a(2)<---------ANAC58        <---------ARR11(1)                  <----------DOF2      <---------LBD16         <---------CCA1(2)          -----------                 <---------ANAC58     <-----------GT1        --------->ANAC55(2)        --------->ZAT18                 <---------ANAC58     --------->MYB52(1)     <---------ANAC55(2)   ---------->DOF2   tctacttcaaaaaatggatgctttcagaaatttccagaaattacgggtccaattgagaaaaacgcgtatcgtcgtcttcttcatcaaaagcgaacaattt  5828600                                                                                       <-------TEIL                                                                                      <-----------GT1                                                                                  <---------TOE2(3)                          <-----------ARR10                                       <---------TOE1(3)              *TSS        <---------ARR11(3)        ------>MYB83                 ---------->DOF2             ------->GAMYB--------->ARR14(2)        ------>MYB46(1)             --------->AHL20(2)            --------->MYB46(3)                    --------->MYB46(3)        --------------->AGL15            <---------MYB52(2)                    --------->DREB2C(2)       <---------------AGL15          --------->MYB52(1)               <-----------ARR10---------->DOF2----------------->AG          ------>MYB83    --------->ARR11(3)      --------->DEAR3(1)       ----------------->AGL2          ------>MYB46(1) <---------ARR14(2)     --------->DEAR3(2)        ----------------->AGL3         --------->MYB55(1)                --------->ARR11(3)            <-----------GT1 ->CBF  <---------MYB59  <---------CCA1(2) <---------ARR11(3)    <----------DOF2--------->YAB1   cgaaaacaaacctaacgaacaaaaatcaaatcttctctctgttaaaatctcaccgactagagaaaagctttgttttttccaattaaagttacattttttg  5828700                                                     <---------ARR14(2)                                                  <---------ANAC55(2)                                                  --------->ANAC55(2)                                                  --------->ANAC58              --------->LBD16                                    ----------->GT1  --------->ARR14(2)   <---------HSFB2a(1)                                <---------AtMYB61 --------->ANAC58        <---------HSFC1(2)                     ------>ZmHOX2a(2)          --------->MYB52(1)        --------->HSFC1(2)                   --------->ARR11(3)      <---------ATHB12---------->DOF2--------->HSFB2a(1)                   <---------ARR11(3)----------------------->TaNAC69(2) --------->ARR14(2)           <----------DOF2    <-----------RAV1(1)<---------LBD16        <---------ARR14(2)           <---------DAG2     <---------ANAC58 <---------ATHB12         <---------GLK1(2)        <-----------GT1       <---------ANAC46 ----------->TGA1        <------ZmHOX2a(1)  --------->LBD16       <---------ATHB12       <---------ANAC58 ----------->HVH21    <------ZmHOX2a(1)   <---------LBD16   tttgaacaaatcactttctgtgatctacatttgtgtggtcgtgaaatcaatgacggaaccagaaagattaggaggaatctccctgagttttccggtgaat  5828800                                                                                        <------NtERF2                                                                                       <------NtERF2                                                                                       <---------At4g35610                                                                                       ------>NtERF2                                                                                       --------->LBD16                                                                                       --------->At4g35610                                                                                      --------->RRTF1(2)                                                                                      ----------->RAV1(1)                                                                                      --------->DEAR3(1)                                                                                      --------->RAP2.3(2)                                                                                     --------->RAP2.3(1)                                                                                     --------->RRTF1(1)                 ----------->RAV1(1)                                                --------->At4g35610           <---------DOF5.7(2)                               --------->HSFC1(1)     ------>NtERF2         --------->At5g28300                       <---------DEAR3(1)               <---------ATERF1(1)         --------->DOF5.7(2)                   <------NtERF2 <---------HSFC1(1)    --------->DEAR3(1)      <-------TEIL                             --------->ATERF1(1)                 --------->ANAC46     --------->CCA1(2)                       <---------ARR14(2)               <-----------HVH21     --------->ARR14(1)                      --------->ARR14(2)              ------>ZmHOX2a(1)<------ZmHOX2a(2)    <---------ARR14(2)                      --------->ATERF1(1)              ========================HOX2a_HOX2a    --------->ARR14(2)                     <---------ATERF1(1)         --------->HSFB2a(1)  ---------    --------->ARR11(1)                 --------->ANAC46      --------->HSFB2a(2)  <---------LBD16    --------->ARR11(3)                <---------LBD16<------NtERF2--------->DEAR3(2)--------->LBD16  ----------->ARR10       ---------->DOF2 <---------DEAR3(1) <---------HSFB2a(2)  --------->ATERF1(1)   gaagaagatacggtaacgacaacatcaccaaagactcttccacggaggctccgtcgtcgtcttctcgaaccgaagagtcctgtctccgccgcagagatcg  5828900                               --------->At4g35610                               <---------ANAC55(2)                             <-----------RAV1(2)                            <---------MYB52(1)                           <-----------TGA1                           <-----------HVH21                          <---------ETT(2)                          --------->TGA1a                          ===========================bZIP_DOF                          --------->ETT(2)                    ------>ZmHOX2a(2)                   --------->GLK1(1)                   <---------GLK1(1)                  --------->ARR14(2)                  <---------ARR14(2)                                                ---------->DOF2                  --------->ARR11(3)      ---------->DOF2                     ----------->GT1                  <---------ARR11(3)   --------->TOE1(3)                   <---------ARR14(2)                  <-----------ARR10    --------->TOE2(3)                <---------MYB59              <---------At4g35610    --------->ARR11(3)              <---------ARR14(2)              --------->At4g35610    <---------ARR11(3)   ----------->GT1  --------->ARR14(2) >GLK1(1)    --------->GLK1(2) ----------->GT1        <----------DOF2--------->ARR14(2)     ------->TEIL   attccaaactcagagaagctgatctccgtcgtcaggtaaaatcttaaagtttgaaactttgggttaaaacagaaccgaatttgaaaaaaagatgaatttt  5829000                                                            <------ZmHOX2a(1)                                                        ======================HOX2a_HOX2a                                                        <------ZmHOX2a(2)             ------->TEIL       --------->ANAC58       --------->ARR11(3)          <---------YAB1        --------->ANAC58       <---------ARR11(3)                         ---       <---------YAB1      --------->ANAC58        <---------TOE1(1)     --------->At4g35610      ---      --------->AHL20(2)   --------->ANAC58        <---------TOE2(1)   <------ZmHOX2a(1)      -------   tgcagcaatattatgaatcactatcgagtaaggcacgacctaagatgagaagtccgagatcaggaagtatagaggagcttagtcagagacttgaatcaaa  5829100  Previous    Next  AGI:  At4g09150.1    Description:  T-complex protein 11. similar to T-complex protein 11 [Arabidopsis thaliana] (TAIR:AT1G22930.1); similar to T-complex protein 11 [Arabidopsis thaliana] (TAIR:AT1G22930.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO24647.1); similar to OJ000114_01.6 [Oryza sativa (japonica cultivar-group)] (GB:CAE03125.3); similar to hypothetical protein OsI_015461 [Oryza sativa (indica cultivar-group)] (GB:EAY94228.1); contains InterPro domain T-complex 11 (InterPro:IPR008862) Range:  from: 5828614    to: 5833657    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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