Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <----------DOF2 <-------GAMYB                                                              =======================================             <---------ZAT6                                   <---------------AGL15  <------MYB46(1)                                   --------->ANAC58         <---------At4g35610  <------MYB83                                      --------->ANAC46     <---------AtMYB61 ---------ANAC46                                    --------->ANAC58     --------->ALFIN1 -------MYB46(3)         <-----------RAV1(1) <---------------AtSPL8   <------ZmHOX2a(1)--------->ICU4   ttgttggtatcacttgtgttatcgtttttgttggaagaagagattggagagtacaagaaacttactctttgaggagtggtgctgttgtcatgctggtatt  5150600                     --------->CCA1(2)                                  --------->AHL20(2)                    --------->ARR11(1)                            <---------AHL20(2)                    <---------ARR11(3)                        <---------AHL20(1)                  --------->ICU4                              --------->AHL20(2)                ---------->DOF2                               <---------AHL20(2)         --------->At4g35610                                  --------->AHL20(1)                    <         <---------At4g35610                                 --------->AHL20(2)                 -----       <-----------RAV1(2)                               --------->AHL20(2)                  --------      --------------->AGL15                      ---------->DOF2  --------->AHL20(2)        --------- =====================MADS_MADS            <---------AHL20(2)<---------AHL20(2)          xxxxxxxxxxxx   cttccatacccagatgagtaaagatttgagagagagagagaatataaaaatcaaagaaaaaaaataaattaaaaaaaaataaaaccctagaaaaataaaa  5150700    <---------ANAC46    <---------ANAC58    <---------ANAC58   <---------MYB46(3)                                       --------->ARR11(3) ------ZmHOX2a(1)        ------->TEIL        <---------YAB1 <---------ARR11(3) ----->DOF2         <------ZmHOX2a(1)     ---------->ID1---------->DOF2 ->AHL20(2)<---------At4g35610       <----------DOF2   --------->YAB1                  <---------ARR14(2) >AHL20(2) --------->At4g35610      <---------ANAC58  <---------ATHB12         ------->GAMYB xxxxxxxxxxx>smallRNA(si3)          <---------ANAC58--------->WOX13(1)--------->ZAT6   --------->ARR14(2)   aaggatgggtgtaagatgaagaggatgtatgtattcttgcttttgttcttatttcaatcaaaggtctctgtaagactataaccacatcaaatccagacga  5150800                                                                                                   <-                                                                                                   --                                                                                    ---------->DOF2<-                                                     ----------->GT1              --------->MYB46(3)                                         <---------YAB1----------->GT1           --------->ANAC46  --                                        --------->AHL20(2)                       --------->ANAC58 ---                                       --------->AHL20(2)                        --------->ANAC58 <--                            <---------MYB59      ---------->DOF2     <---------ANAC46           -----                       --------->DAG2  <---------AHL20(2)            --------->At4g35610        -----                      ---------->DOF2 --------->AHL20(2)             <---------At4g35610    ---------   ctagacgactcatctatgaaatcaaaaaggcctaactcaaattaatataaaaaaagagagaaaattttgtgaggtgaagttgcacccaaagaaaaaccaa  5150900              <---------AHL20(2)             --------->AHL20(1)             <---------AHL20(1)             --------->ARR11(3)             <---------ARR11(3)            <XXXXXXXXXXXXXXXXXXXXMIR865-3P            --------->CCA1(2)       ---------->DOF2 --------AHL20(1) ------->AHL20(2)                                                 <---------ANAC46              ----- --------AHL20(2)                                                 <---------bZIP60(2)   ------------- ------->AHL20(1)                                              ----------->HVH21    --------->AHL20(2) ------>AHL20(2)      <------ZmHOX2a(1)                        *TSS ------------------------>ANAC81 -------AHL20(2)    <---------TOE2(3)                        ----------->GT1       --------->AHL20(2) ->MYB46(1)<---------ARR11(3)                            --------->ANAC58         ------------------- ->MYB83   --------->ARR11(3) --------->MYB52(1)         --------->ANAC58    ----------->GT1   ------ --------------->ANAC81 ----------->GT1              <-----------HVH21   ------------------------>ANAC81   ataaattgaaaaagatatatttgaggaagaaaaaacgaactaggtatatagaattcgtcaaggaagtgacatggaagagaagaaaataaaaaaaaaaaaa  5151000                                                                         >>>>>>>>>GATA-2                                                                         >>>>>>>>>GATA-1                                                                         >>>>>>>>>GATA-4                                                                    <---------ANAC46                                                                    <---------ANAC58                                                                    <---------ANAC58                                                                   --------->ATHB12                                                                 <----------DOF2                                                                <---------ANAC46                                                           <------MYB83  >>>>>>>>>GATA-3                                                           <------MYB46(1)<---------WOX13(1)                                              --------->YAB1    <---------ANAC58                                              <---------ICU4    <---------ANAC58                                             --------->ICU4<---------ANAC46                                             <---------ATHB51  <------NtERF2                                             <---------ATHB12<---------DEAR3(1)              <------- ---------->DOF2                           --------->YAB1  <---------ANAC58                 <-------- ------------------->ANAC81               --------->ZAT6   <---------ANAC58                 <-------- ----------->ANAC81                      <---------TOE2(3)--------->MYB55(2)            <---------MYB52(1) ----->ANAC81                            ------------>CBF <---------MYB46(3)       --------->O2 ---->DOF2         ---------->DOF2      <-----------GT1   --------->MYB111(2)      <---------O2     -   agagaaagagagaagaagagagaaagagagagagagagagattaacaataatgaagaagttgggtggcttgagtggattgacaagacgtcgtttgctttg  5151100    ---------->DOF2           <---------TOE2(3) ---DOF2                    ---------->DOF2             --------->DAG2 -ANAC58               --------->AHL20(2)             --------->CCA1(2)                           <-- -ANAC58               <---------AHL20(2)           --------->CCA1(2)                            ---- -------->At4g35610   --------->AHL20(2)    <----------ID1  ---------->DOF2         ------>ZmHOX2a(1)   ggagcaaaaagaaatatttgaaaattaaaataaaggtaagagagaagggacaagagataaggcaaaggcttctctcttctgttttcctctcataggctat  5151200                                   --------->AHL20(2)                                   <---------AHL20(2)                                  <---------AHL20(2)                                  --------->AHL20(2)                                  --------->YAB1                                                  <--                              --------->AHL20(2)                                                <----                              <---------AHL20(2)  <---------AHL20(2)               --------->ANAC58                            --------->ANAC55(2)  --------->YAB1          <---------ATHB12   ---------    --------->TOE2(3)     <---------AHL20(2)    <---------YAB1       --------->MYB46(3)     <-------- -------AHL20(2)          <-----------GT1   <---------ANAC46        ------->TEIL   --------->ANAC46 ----->AHL20(2)      <---------AHL20(2)   ----------->GT1     <---------TOE2(3)    --------->ANAC58<-   tttatacattagaacaagactaagtaatttacttaattaaaatgtggtttataatattcgaattaagatgaaccactcagtgtttaagcaactaggtctt  5151300                                       <---------ARR11(3)                            <------MYB46(1)    <-----------GT1        <-----------RAV1(2) <------MYB83    <---------------AtSPL8 <------NtERF2          <---------STY1(2)   --------------->AtSPL8 -------LBD16        <---------ANAC58  --------->ARR11(3)                                      ------ -----REM1(2)        <---------ANAC58  <---------AHL20(1)                                      ------ >ARR11(3)     <---------TOE2(3)    --------->YAB1                                             ------ -ARR11(3)     <---------TOE1(3)  <---------WOX13(1)     <---------HSFB2a(2)       ---------->DOF2 --------RAP2.6(2)  --------->MYB52(2) --------->AHL20(1)--------->HSFB2a(2)   --------->TOE2(3)    -   cgcggctacttcaggctatggtttcttgctaggttgaatgatatattttgtactattttctagtaatgaaatgtttttttttcttaaaagaatagtcaag  5151400 --------->DAG2            <---------AHL20(2) --->ANAC58                --------->AHL20(2) --->ANAC58            --------->ATHB12                              <---------ZAT14 ----->GT1  --------->AHL20(2)                              --------->GLK1(2)         <---------ZAT6 --------->DOF2       <---------YAB1                  --------->TOE1(2)   <---------MYB46(3)   aaaaaagttttaaaaaaaatatgtatgatttatatatacttctaatacgatataaacccaagaatttgtagtctagtggttgaacatagagttcgttcaa  5151500  Previous    Next  AGI:  At4g08150.1    Description:  KNAT1 (BREVIPEDICELLUS 1); transcription factor. Identical to Homeobox protein knotted-1-like 1 (KNAT1) [Arabidopsis Thaliana] (GB:P46639;GB:Q8S3L9;GB:Q8S3M0); similar to STM (SHOOT MERISTEMLESS), transcription factor [Arabidopsis thaliana] (TAIR:AT1G62360.1); similar to BREVIPEDICELLUS [Cardamine hirsuta] (GB:ABG66654.1); contains InterPro domain KNOX1; (InterPro:IPR005540); contains InterPro domain ELK; (InterPro:IPR005539); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain KNOX2; (InterPro:IPR005541); contains InterPro domain Homeobo Range:  from: 5147697    to: 5150963    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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