Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <-------MYC3                                                                               ------->PIF4                                                                               ------->MYC4                                                                               ------->MYC2                                                                               ------->MYC3                                                                               ------->PIF5                                                                               <-------PIF4                                                                               <-------MYC4                                                                               <-------MYC2                                                                               <-------PIF5                                                                              --------->TGA1a                           --------->ANAC58                                   --------->O2                           --------->ANAC58                                   <---------ANAC46                         ---------->DOF2                                      <---------O2                       --------->ANAC46                                <---------ICU4                       --------->ANAC58                                --------->YAB1                  --------->ANAC46                                    <---------ATHB12               --------->MYB46(3)                                   ------>MYB46(1) --------->At4g35610               --------->REM1(1)             <---------ANAC55(2)  --------->AtMYB61 <---------At4g35610             ----------->RAV1(1)   ----------->GT1     ------->TEIL ------>MYB83--------->ALFIN1    <---------MYB46(3) --------->ANAC58--------->AHL20(2)      --------->ZAT6 <---------TGA1a   cacaattggttacagcaacaacaccacgaaagaaacacagaaaaaatacttaaaatgaatcaataacaccaaatcatggcacgtggagcttactgatgaa  22742200                    <------ZmHOX2a(1)             ------->TEIL                                        ---------->DOF2            <---------AtLEC2                         --------------------->WRI1                     <      --------->ANAC58                            ------>ZmHOX2a(1)                           ------>MYB46(1)      --------->ANAC58                   --------->CCA1(2)   --------->YAB1     <---------ZAT14     - <----------ID1<-----------HVH21        --------->ARR11(3)   <---------ICU4     --------->ZAT14     < --------->ANAC58  ----------->GT1      --------->ARR11(1)  --------->ICU4   --------->HSFC1(2) ----- --------->ANAC58 >>>>>>>GRF7           <---------ARR11(3)--------->YAB1     <---------HSFC1(2)<----- --------->ANAC46<-----------RAV1(2)---------->DOF2  <---------ANAC46     <------ZmHOX2a(1)   ------>MYB83   atcacgacaagcatgcatgtcaggataattttcaaactcaaagatatgactccttccctgtaataatcaaagacgaggaaacttcagtgatacacctatc  22742300                                               <---------ANAC58   <---------AHL20(2)         <------ZmHOX2a(1)<---------ANAC58 ---------ARR11(3)         <------NtERF2      <---------ZAT2 -------->AHL20(1)        <---------TOE1(1)<---------ANAC58                          ================ ---------AHL20(1)     <----------ID1      <---------ANAC58                       ------>ZmHOX2a(1) ---->YAB1          --------->DAG2        --------->ZAT2                        ------>ZmHOX2a(2) --- ----ATHB12        ---------->DOF2    -------->P  <-----------HVH21 ----------->GT1  <----------DOF2   aatattttttagccttgagcaaaaagggccgaggaaaaacaacctgcttgctggtcagattgagccaaggaggtttatttgatccttctttggtatattt  22742400                             <---------ICU4                             --------->ATHB12                            <---------YAB1       --------->YAB1             <-----------GT1--------->ICU4      <---------YAB1           --------->AHL20(2)<--------HAHB4   --------->YAB1 <---------TGA1a          <---------ICU4    <---------YAB1 ==========bZIP_DOF       --------->YAB1 <---------ATHB51                                     <------ -------->HVH21          --------->ICU4  --------->ICU4                ----------->GT1   <----------DOF2   ctgacctgagaaatttaacatggcacaataatcatttagagaaattattcatgataaatctgaatgaacaatatggataatcaaacacttacttttgatg  22742500                                                                                            ------>ZmHOX2a(1)                                                                                            <--------                                                                                          ===========                                                                                          ------>ZmHOX2a(2)                                                                                         <------ZmHOX2a(2)                                                                                         ============                                                                                        --------->ARR14(3)                                                                                        --------->ARR14(2)                                                                                        <---------ARR11(3)                                     --------->ATHB12                                   <---------ARR14(2)                                    <------ZmHOX2a(2)          --------->ZAT14          <---------ARR14(3)                                   --------->ARR11(3)          <---------ZAT14          --------->ARR11(3)                                   <---------ARR11(3)  --------->At4g35610             <---------HSFB2a(1)                       <---------ARR14(2)      ---------->DOF2 <---------ZAT18         --------->HSFB2a(1)                       --------->ARR14(2)  <----------ID1  <---------ALFIN1           ----------->ARR10               <---------TOE1(3)  <------ZmHOX2a(1) --------->At4g35610         <------------CBF ---TOE2(3)<----------DOF2      <---------TOE2(3)---------->DOF2               --------->DAG2   ttgtgagtctgaactttaagcttcaaatctgatttaggatcatttgggacaaagagcagcatcacttcactctgagaacaaaaattggaagatcctttga  22742600                                                                                              <------ZmHOX2a(2)                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                          --------->LBD16                                                                                          ------>ZmHOX2a(1)                                                                                     --------->GLK1(1)                                                                                     <---------GLK1(1)                                                                               ======================                                                                               ==================HOX2a_HOX2a                                                                               ------>ZmHOX2a(2)                 <------ZmHOX2a(1)                                            <------ZmHOX2a(2)                ----------->GT1                                               =======================               <---------TOE2(3)                      <---------TOE2(3)       ===================HOX2a_HOX2a --DOF2<------------CBF           --------->YAB1     ---------->DOF2         <---------ARR14(2)  ---- =======================HOX2a_HOX2a              ----------->GT1             --------->ARR14(2)------ =======================HOX2a_HOX2a          ---------->DOF2      <---------------AGL15  <---------LBD16   gaaaaaaaccattgagtaaggaaacaaaaatagaaatcatatagtggcaaagagttaaagtattcttactaattcgagggatccaagagttcctggatcc  22742700      <---------ARR11(3)      --------->ARR11(3)  ---------->DOF2 --ARR11(3) ->ARR14(2)                                                                               <------NtERF2 --ARR14(2)                                                                              --------->LBD16 ===HOX2a_HOX2a                                             --------->At5g28300        <---------LBD16 ===HOX2a_HOX2a                                            ----------->GT1   <---------YAB1  <------ZmHOX2a(1) -->ZmHOX2a(1)                                      ---------->DOF2          <---------TOE2(3) >ZmHOX2a(2)                  <------------CBF--------->HSFB2a(1)<------------CBF     --------->At4g35610   ttcacaaagctcttgtatttgactcgcttctccattgatatatgcccaaggttctaaagcatggtaaaattggtggattaagtttgtgagccggaggagg  22742800               <------NtERF2             <---------ANAC46             <---------DEAR3(1)             --------->RAP2.6(3)            <---------LBD16             <---------------AtSPL3<------ZmHOX2a(2)            <------NtERF2               <------ZmHOX2a(1)    <---------ARR14(2)            --------->ATERF1(1)         =============================HOX2a_HOX2a           <---------ATERF1(1)       --------->ATERF1(1)    <---------At4g35610           <---------RAP2.3(1)       <------NtERF2          --------->At4g35610           ------>NtERF2            --------->LBD16      <------NtERF2          <---------RAP2.3(3)      <---------ANAC58      <---------At4g35610          <---------DEAR3(1)       <---------ANAC58     ------>NtERF2          <---------RAP2.3(2)     <---------LBD16       <---------DEAR3(2)        --------->AHL20(2)         --------->ATERF1(1)    <-----------RAV1(1)    <---------At1g77200        <---------AHL20(2)       --------->ETT(2)      <---------ARR14(2)        <---------DEAR3(1)         --------->AHL20(1)       <---------ETT(2)      ------->TEIL  --------->MYB52(1)--------->ARR14(2)  <---------AHL20(2)    --------->ALFIN1         --------->ARR14(2)     <---------ANAC58             --------->AHL20(2) <------ZmHOX2a(1)<------ZmHOX2a(1)<---------ANAC46 <---------ANAC58   --------->YAB1          ------   taaggagtgtcgacggcggaggaaatatttgaatctggcggaggagaacggctagcgtcggcagatcagacaaaaatagctaaataatttgggaattttg  22742900                                      <-------MYC3                                      <-------PIF5                                      ------->MYC2                                      <-------MYC2                                      ------->PIF5                                      ------->MYC3                                      <-------MYC4                                      ------->MYC4                                     --------->O2                                     <---------ANAC46                                     <---------O2                           ====================MYC_MYB                           <-------GAMYB                          --------->MYB111(2)                          ----------->GT1                          <---------MYB46(3)      ----------->HVH21                          --------->MYB55(2)     --------->LBD16                         --------->ALFIN1       <---------ANAC46                     <---------ALFIN1                       <---------ANAC46         <---------ANAC58       ----------->GT1    --------->LBD16                       <---------bZIP60(2)      <---------ANAC58       <---------MYB46(3)--------->ANAC46                 --------->ICU4      <---------ANAC55(2)       <---------ANAC58   --------->ZAT14                --------->ARR11(3)   --------->TGA1a           <---------ANAC58   <---------ZAT18           --------->HSFB2a(2)       <---------TGA1a        <---------CCA1(2)     <---------ZAT14 ----->GT1 <---------HSFB2a(2)     <---------ALFIN1    <---------At4g35610       <-----------HVH21   ttaattttaagttcgagagataatgaggtggttagaaccacgtgtacgagccgtgatagctcatgtcttgagatggttcaacagttcacacccgaagttg  22743000                       ------->TEIL               <-------MYC3               ------->MYC3               <-------PIF5               <-------MYC4               ------->PIF5               ------->MYC4               <-------MYC2               ------->MYC2              <---------O2                    <------ZmHOX2a(2)              --------->O2              <---------DEAR3(1)                  --------->ARR14(2)              <---------ANAC46         <---------ANAC58         --------->At4g35610              <--------ABF1            <---------ANAC58         <---------At4g35610              --------->TGA1a         ------>NtERF2          <---------MYB52(1)              <---------TGA1a       --------->LBD16        <---------MYB46(3)           ------------>ATHB5              <---------ANAC55(2) <---------LBD16       <---------ZAT6      <---------ARR14(2)            <---------ALFIN1    <-----------GT1    --------->YAB1         --------->LBD16  --------->AHL20(2)   atgagtctcaagagccacgtgtacgagccttgtttaaccgggcctgcgatcaatagtagtgttgttagcttaagcccgtatatgtatggcccatttattg  22743100  Previous    Next  AGI:  At3g61420.1    Description:  transcription factor-related. similar to transcription factor-related [Arabidopsis thaliana] (TAIR:AT1G55750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45216.1); contains InterPro domain BSD (InterPro:IPR005607); contains InterPro domain Kelch related (InterPro:IPR013089) Range:  from: 22738210    to: 22742562    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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