Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <---------RVE1(1)                     <---------CCA1(1)                    --------->ARR11(3)               <---------HSFB2a(2)                                                                ---     <---------GLK1(2)                             --------->DAG2                                 --- ---------->DOF2    <---------ARR11(3)         --------->YAB1                                   ----- --->TEIL      --------->HSFB2a(2)            <---------YAB1                                   ------ -->ANAC58    --------->REM1(2)          <---------At4g35610                                  ------- -->ANAC58 <---------ANAC58              --------->At4g35610      <-------TEIL             <---------MYB52(2) ---GT1    <---------ANAC58          <-----------GT1        <---------AHL20(2)           <-----------GT1   atctaaagattgtgcgtctagagatattttagtcaattttcactgctgatcataagggggatttaaaattcgtctggctaaacatgaaaattcactaacc  22339700                    <---------WRKY38(1)                    <---------WRKY12                    <---------WRKY45                                                              ---                   --------->WRKY18(1)                                                            ---                  <-----------HVH21  --------->ANAC58                                           <----     --------->ARR14(2) ----------->RAV1(1)                                 <---------WOX13(1)  ----- --->MYB46(1)    ------->GAMYB       --------->ANAC58     ---------->DOF2 <---------ICU4        ----- --->MYB83     <---------At5g28300   --------->ANAC46--------->ARR14(2)   --------->ATHB12      <---- -->GAMYB     --------->MYB52(1)   --------->ZAT6    <---------ARR14(2)  <---------YAB1         <---- --->MYB46(3) <---------DOF5.7(2)<-----------GT1 --------->At4g35610     --------->ICU4   <---------- ->P <---------ARR14(2)--------->ANAC46        --------->YAB1       <---------At4g35610   -----------   aacttcatatacccattaacggtcaacaccagaataaacactccatcaataagcagaaccaaaagaatgtagatgatgattgcattgagtttttggtacc  22339800 --------->TOE2(3) --------->TOE1(3) --------->YAB1 --->MYB83 --->MYB46(1) -----MYB59                                          --------->WOX13(1) ---->MYB46(3)                                    --------->ANAC58               <---------MYB52(1) ---->AtMYB61                                     --------->ANAC58              <-------GAMYB -----MYB111(1)       --------->LBD16           ---------->DOF2           ------>MYB83             <- -----MYB46(2)       <---------ANAC46       --------->AtLEC2              ------>MYB46(1)         <-- -----AtSPL8        <---------LBD16    --------->TOE2(3)                --------->AtMYB61 <-------TEIL ---->AtSPL8     <---------GLK1(1)  ----------->RAV1(1)           --------->ANAC46      <---------MYB52(1)   aaaccataaccaggtttcgaattccgcatacaaattggcaacatttatgcaaaagcaatctactctctactccaccaatctcggttaaccggtacatttc  22339900                                               --------->TOE1(3)                                               --------->TOE2(3)                                               --------------->AGL15                                               <---------------AGL15                                               --------->YAB1                                              ----------------->AGL3                                              <-----------------AGL2                                              ----------------->AGL1                 ------>NtERF2                                              <-----------------AGL1              --------->LBD16           ------>ZmHOX2a(1)                  <-----------------AG               <---------ANAC58         ----------->RAV1(2)                  <-----------------AGL3             <---------ANAC58      --------->KAN4(2)                       ----------------->AG            <---------ARR14(2)    <---------MYB52(1)                        ----------------->AGL2          --------->ARR14(2)   <-------GAMYB                     <---------AHL20(2)                      <---------HSFC1(2)   --------->At5g28300          <---------AHL20(1)                           --------->HSFC1(2)    -- --------ALFIN1     <-------TEIL--------->AHL20(2)                           <---------HSFB2a(1)----- -------REM1(2)<---------LBD16  <---------AHL20(2)    ----------->GT1        --------->HSFB2a(1)<----   tccacggttattcctggtccggttcatttcttattttatttgattcgaaccataaatggcaaaacagcaatttcatggaagttccgaggccattttgcta  22340000            --------->ANAC58         <------NtERF2         <---------SPL7       --------->ANAC58       --------->ANAC58       --------->ANAC46                    --------->TOE1(3)      --------->RAP2.6(3)        --------->ALFIN1       <---------ARR14(2) ----->GAMYB--------->ANAC58--------->MYB52(1)          --------->ARR14(2) ---->MYB52(1)             --------->AtMYB61        --------->LBD16 <-------TEIL                    - -----DOF5.7(2)      ---------->DOF2       --------->TOE2(3)       *TSS                         -----   acggtatagacggcacgggaagagaaagaccaccggtggagaaaaccctaatcccccaaattcgaccatgttcatggttcgattgaaattcgcatcgatc  22340100                     <------NtERF2                     <---------------------WRI1                     --------->RAP2.3(1)                    ------>NtERF2                    <---------ERF1                    <---------RAP2.3(1)                    <---------ATERF1(1)                    <---------ORA47(2)                   --------->ATERF1(2)                   <---------ATERF1(2)                   <---------RAP2.6(2)                   <---------RRTF1(3)                   <---------ANAC46                   <---------DEAR3(1)                   <---------RAP2.3(2)                   <---------RAP2.3(3)                   <---------RRTF1(2)                  <------NtERF2                  <---------ABI4(1)                  --------->ATERF1(1)                 --------->ABI4(2)                 ------>NtERF2            <---------ZAT14            --------->ZAT14                                                     --------->ANAC58            --------->SPL7                                                      --------->ANAC58          <---------SPL7                            --------->ANAC46            --------->ANAC46      ------------------>SPL14            <------NtERF2                      --------->ZAT2   <---------ICU4<---------ERF1          ------>NtERF2                       <---------ZAT2   --------->ATHB51<---------DREB2C(2)  <---------ANAC46                    --------->ANAC58  --------->ICU4 <---------ATERF1(1)    --------->ATERF1(2)                 --------->ANAC58  <---------YAB1 <---------MYB46(3)     --------->DEAR3(1)            --------->DAG2 -------->YAB1  <---------DEAR3(1)    <---------ZAT18                ---------->DOF2 ->ZmHOX2a(2)   --------->ALFIN1      --------->ZAT18          --------->MYB52(1)                  <-   tctcataatttcagtacggtggcggcgaaacatagaagagtgccgtcgaaatacaagtctctagccatcggaaaagcccagcaagccattacagactatc  22340200                                                         <---------MYB52(1)                                                     ------>NtERF2    --------->AtMYB61                               --------->DEAR3(1)   --------->MYB46(3)                            --------->ANAC58 --------->ANAC58                                --------->ANAC58             ------>ZmHOX2a(1) --------->ANAC46                                ------->GAMYB                --------->LBD16       - --------->ANAC58     <---------ALFIN1           --------->ANAC46           ----------->RAV1(2)    <- <---------ALFIN1    --------->ZAT14       --------->TOE2(3)        --------->ARR14(2)     <--------- --------ALFIN1     ------>ZmHOX2a(1)     XXXXXXXXXXXXXXXXXXXX>MIR4228 --------->TOE2(3)<---------GLK1(1)   tccacaccaccaggtctctctcctacactcacgctgaacaaattgcctcaaacgcctccgtttcgattcgaaacctcatcctgaaactcgatttctctgt  22340300                           --------->At4g35610                        <---------HSFC1(2)                        --------->HSFB2a(1)                        --------->HSFC1(2)     <---------TOE2(3) <---------TOE1(2)      <---------HSFB2a(1)   <-----------GT1 -------->P <-----------ARR10             ------>ZmHOX2a(1) ------>MYB83          --------->ANAC58------>MYB83<---------ARR14(2) ------>MYB46(1)       --------->ANAC58------>MYB46(1)                                      <-------- ----->ZmHOX2a(1) <---------LBD16  <---------At5g28300             <---------HSFB2a(2)<---------ZAT14 --------MYB59   --------------------->WRI1   --------->MYB52(1)   --------->HSFB2a(2)--------->ZAT14 --GT1     <---------CCA1(2)      <-----------GT1  --------->ARR14(2)            --------->WRKY38(1)   tcctaccttctccaaatctcttcggaagcatctcagttaccatcctattaacgaattcgagtttttcttcgagagcattggcattgactacagtgaggtt  22340400                                                                                     <---------ANAC46                                                                  <XXXXXXXXXXXXXXXXXXXMIR158A                                                                  <XXXXXXXXXXXXXXXXXXXMIR158B                                                                 --------------->AGL15                                                  <---------MYB46(3)      <---------ARR14(2)                                              <-----------RAV1(1)<---------DAG2      <---------ANAC58                                              --------->ALFIN1   <---------------AGL15                                     <---------ARR14(2)          <----------DOF2 <---------GLK1(1)                                     --------->ARR14(2)         <-----------------AGL3     <---------KAN4(2)                                    <------ZmHOX2a(1)      <----------DOF2--------->ARR14(2)       <-         <---------ANAC58         <---------TOE2(3)      <---------At4g35610     --------->GLK1(1) <- -TOE2(3)<---------ANAC58<<<<<<<<<TBF1 ------>ZmHOX2a(2)------->TEIL  <---------LBD16<---------ANAC58   agcgagtttttgcctgagaagaaattcttcttctctgaggatcggactgtgttggatgcagcttttgctttatctggatttgggtttccttggaataagc  22340500                         <---------MYB46(3)                                                 ---------                         <------MYB46(1)   <---------HSFB2a(2)                       <---------ARR14(2)                         <------MYB83 --------->DEAR3(1)                            <------ZmHOX2a(1)      ----------->GT1   <---------AtMYB61  ------>ZmHOX2a(1)                   --------->CCA1(2)    -   --------->MYB52(2)  <--------P    --------->At4g35610                      --------->ARR11(3)   <- <--------P         --------->DAG2   <---------At4g35610                   <---------TOE2(3)<-------- -----MYB83---------->DOF2        --------->ZAT14                         ---------->DOF2   <-------- -----MYB46(1)   <------ZmHOX2a(1)<---------ZAT14           --------->ANAC46  <---------ARR11(3)  <--   ttggtaagttgtataaagaggaaaggttggtttttgtgcagcgtcctggagaaattgaatccaggctacttaagtttaaagatataggattcagtacagt  22340600  Previous    Next  AGI:  At3g60400.1    Description:  mitochondrial transcription termination factor-related / mTERF-related. similar to mitochondrial transcription termination factor-related / mTERF-related [Arabidopsis thaliana] (TAIR:AT5G06810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70563.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 22340067    to: 22342078    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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