Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <---------GLK1(2)                    <----------DOF2                   <---------ANAC58      ----------->GT1            <---------ANAC58           <---------ANAC46        <---------At4g35610            <---------ANAC58                          <---------AHL20(2)       <-----------RAV1(1)--------->GLK1(2)      <-----------GT1      ---------->DOF2            ----   <----------DOF2 <---------ANAC58    <---------ANAC58          ----------->RAV1(1) <-----------GT1 ---------YAB1  ---------->ID1       <---------YAB1              ------>MYB46(1) <---------AHL20(1) ------>YAB1<---------ANAC58      <---------ARR14(2)             ------>MYB83    --------->AHL20(1) ---->ARR11(3)<---------MYB46(3)  --------->ARR14(2)          --------->ANAC46   --------->AHL20(2) --->YAB1   <---------ANAC46      <---------ARR11(3)        <-----------GT1  --------->ICU4  <-------   tcatgctttgtgctgcttgttgctttagaatctcaagttctgcttgtaaattcacaacctataaacccaacaaaaagaactaattaattacaaaatgtca  21560100                     <---------ARR11(3)                     --------->ARR11(3)                     --------->ARR14(2)                     <---------ARR14(2)         <---------ARR11(3)         <---------AHL20(1)         --------->AHL20(1)         <---------AHL20(2)                                  --------->HSFB2a(2)         --------->AHL20(2)                       <---------ICU4                          --------->ARR11(1)         --------->ARR11(3)                       --------->ATHB12                        --------->ARR11(3)        --------->AHL20(2)                       --------->ICU4            <-----------RAV1(1)     <---------AHL20(2)  <-------TEIL            <---------YAB1---------->DOF2            <---------ARR11(3)    --------->AHL20(2)--------->CCA1(2)        --------->YAB1<---------HSFB2a(2)        ----------->ARR10 ----->AtLEC2  <---------TOE2(3)        ---------->DOF2      <---------YAB1<---------MYB46(3) ----HVH21<---------AHL20(2)        <---------ANAC46   <---------TOE2(3)<-----------RAV1(1)--------->CCA1(2)   tgccgattaaatatatttatgtagatatacatatagttttgtgaaagtatcatgattagggttctgaaaggtacctgttgttggagagcaaagatatgag  21560200                              <---------ANAC58                              <---------ANAC58                             --------->STY1(2)                  ------>ZmHOX2a(2)                                     ------>ZmHOX2a(2)                 <------ZmHOX2a(2)                           <-----------HVH21                --------->ARR11(3)                           <----------DOF2                <---------ARR11(3)    <-------TEIL <---------YAB1      <------ZmHOX2a(2)                <---------ARR14(2) <---------At4g35610   <---------RAP2.6(2)        <---------At4g35610                --------->ARR14(2) --------->At4g35610  --------->RAP2.6(3)         --------->At4g35610   aaacacagccatagatgggatcttgaagcctagcttgagcttcataagagattgtaatagcggcttcacagcgatcgctaatgggaagatgagagagcaa  21560300                      --------->ARR11(3)                      <---------ARR11(3)                  ---------->DOF2             --------->At4g35610       ---------->DOF2             <---------ZAT2          <------NtERF2                                         <---------          <---------ANAC58    <---------AtLEC2                    ---------->DOF2  --------->ANAC46          <---------ANAC58  <---------YAB1       <---------At4g35610        <---------At4g35610    --   cttagaagcattgctagctccaaagaccttgtgaatggctgcaaagtgtgaagctccttgttcatgacaaaagtatggagcaaacacacatccctttgca  21560400                                                                 --------->YAB1                                                                <---------YAB1                       ----------->RAV1(1)                      --------->ICU4                    --------->ANAC58                          --------->YAB1                    --------->ANAC58           <---------ZAT2 <---------ICU4           <------ZmHOX2a(1)                   --------->At4g35610 <---------YAB1    ------>ZmHOX2a(1)--------->MYB46(3)        <---------At4g35610 --------->ICU4   <---------ARR14(2)  <-----------------AGL1                       --------->ZAT2--------->ICU4         --------->ARR14(2) -DOF2 ------>ZmHOX2a(1) --------->AtMYB61    <---------AGP1 <---------YAB1   ----------->TGA1 ------->GLK1(1)    --------->ANAC46    --------->AGP1     --------->YAB1     ----------->HVH21------   catttcctcctaaggaacttacaagcaccacaaggagagccagagctagagctggaactagtcatgatgatgatggtgttgtgacggttcttgatattaa  21560500                       <---------WOX13(1)                     --------->ATHB12                                           <---------AHL20(2)                    <---------AHL20(2)                                       <---------ARR11(3)                    --------->AHL20(2)                              <---------TOE1(3)                   <---------WOX13(1) <------MYB46(1)               <---------TOE2(3)       <---------AHL20(2)             <------MYB83  --------->TOE1(3)        --------->ARR11(3)------       --------->AHL20(2)            --------->MYB59--------->TOE2(3) <------ZmHOX2a(1)  --------->ANAC58      <---------AHL20(2)             <---------TOE2(3)  <---------ANAC46    <---------RVE1(1)--------      --------->AHL20(2)  <---------YAB1       ==============================HOX2a_HOX2a --------->ANAC58 ---->DOF2      <---------YAB1     *TSS        ------>ZmHOX2a(2)<----------DOF2--------->AHL20(2)   aggtcgaatttaatttttgtgattaattgctattggtattaggttttgatctaaccttgagtatagctttaaggagagagattttataaacaaggcaaag  21560600                                                                                     <---------YAB1                       <---------AHL20(2)                                       <---------AHL20(2)                    --------->AHL20(2)                                         <---------AHL20(2)             <-------GAMYB                                                  --------->ATHB51            <------MYB46(1)                                                 --------->AHL20(2)            ----------->GT1                                       <---------ALFIN1  <---------AHL20(2)            <------MYB83                             --------->At4g35610   <---------YAB1    <---------REM1(1) --------->YAB1                 <---------At4g35610   --------->ICU4 --------->ICU4  <---------ANAC55(2) --------->AHL20(2)          <---------ZAT14--------->AHL20(2) --->DAG2  <---------MYB46(3)        <---------AHL20(2)<----------DOF2  <---------YAB1    <---------ICU4 -->DOF2  --------->ALFIN1 <-----------GT1  ------->TEIL         <---------REM1(2)<---------YAB1<----   gtgaagatgaaggtgggttacatataatattacatttgtttaattgcatcttgtctgcttaatggtctacacttctcattatttatttttattcattcct  21560700                                                                                            <--------                                                                                            ---------                                    <----------ID1                                          <--------                            ---------->DOF2                                                --------->AHL20(2)                       <---------------AGL15                                               <---------AHL20(2)                       --------------->AGL15 <----------DOF2                          --------->AHL20(2)                      <---------ANAC58    --------->ARR11(3)                          <---------AHL20(1) ------DOF2           <---------ANAC58    <---------ARR11(3)                          <---------AHL20(2)   tttgcattagtacaattttgtttttcttgttaaagaaatcgacaaatctttttggaattttgtatgcataaaacgagagatttagtattttattttaatt  21560800                           --------->AHL20(2)                        <---------YAB1                                <---------------AtSPL3                      --------->AHL20(2)    <---------ARR11(3)       <---------ANAC46 -AHL20(2)            <---------AHL20(2)    --------->ARR11(3)       <---------ANAC58 >AHL20(2)           <---------AHL20(2)     --------->AHL20(1)       <---------ANAC58 -YAB1            --------->AHL20(2)    ---------->DOF2             ------->TEIL              <------   agggggaaaacagccttggattatttatttttaataccaaaaaaaagatattgcatagtagaacagaatggacgtgtacatctctactaaaccaatttga  21560900                                                                                                 ----                                                                                                 ----                                                                                     --------->ARR11(3)                  ---------->DOF2                                                    <---------ARR11(3)               --------->AHL20(2)                                            --------->ANAC46    ----       --------->ANAC58                                                     <---------REM1(2)  <-----       --------->ANAC58            <<<<<<<<<<<<<<<<<LFY                     <---------ZAT14    <-----     ---------->DOF2             <-----------GT1                            --------->ZAT14    <----- ---YAB1       --------->YAB1 <---------ICU4             <------------------------ANAC81    <--------   ttaaaccgaaagcaaaattataaagaatagactaattacacaatgggccttagttttttttttttttttttttgcctctacacaatagaccttctaacct  21561000  Previous    Next  AGI:  At3g58190.1    Description:  ASL16/LBD29 (LOB DOMAIN-CONTAINING PROTEIN 29). Identical to LOB domain-containing protein 29 (LBD29) [Arabidopsis Thaliana] (GB:Q9M2J7;GB:Q1LYU4); similar to LBD14 (LOB DOMAIN-CONTAINING PROTEIN 14) [Arabidopsis thaliana] (TAIR:AT2G31310.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75719.1); contains InterPro domain Lateral organ boundaries, LOB (InterPro:IPR004883) Range:  from: 21559461    to: 21560535    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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