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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                     <------ZmHOX2a(1)
                                              --------->AHL20(1)
                                              <---------AHL20(2)
                                              --------->AHL20(2)
                                           <---------AHL20(2)
                                           --------->AHL20(2)
                                           --------->YAB1        ------>MYB83
                   ------>MYB46(1)       <---------YAB1        <---------MYB46(2)
                   ------>MYB83       --------->AHL20(2)    <-----------GT1
               >>>>>>>>>>MYB80        <---------AHL20(2)--------->AHL20(2)   --------------->AtSPL8
               ------------------------>ANAC81<---------AHL20(1) ------>MYB46(1)    --------->ZAT14
      --------->AHL20(2)        ---------->DOF2    <---------TOE2(3)         <---------------AtSPL8
      <---------AHL20(2)  --------->AHL20(2)<---------TOE2(3)  <---------MYB59      <---------ZAT14
 
attttgaatttaaattcaaaccaaacaaaaaaaatcaaagttttattaatattttaggattaaataccaaactctgaatttgagtactaaactgtttatc  20969200
                                                                 --------->YAB1
                                                            <---------O2
                                                            --------->TGA1a
                                                            <---------TGA1a
                                                            --------->ANAC55(1)
                                                            --------->ANAC55(2)
                                                            --------->ANAC58
                                  ------->TEIL              --------->ANAC58
                               <---------ANAC55(1)          <---------ANAC55(2)
                               <---------ANAC58             --------->O2
                               --------->ANAC55(2)      <-----------TGA1
                               <---------ANAC55(2)      <-----------HVH21<-------TEIL
   <---------YAB1              <---------ANAC58    <----------DOF2      --------->CCA1(2)
 --------->YAB1               <---------TOE2(3)    ===================bZIP_DOF
<---------ATHB12             <-----------GT1    <-----------GT1------->TEIL
 
ccaatgataaatgttttgttttagatactattttacgtatcaaaagttttttttcttttcgtcacgtatcagaagattcaaaactaaaccaaaattcgga  20969300
                                                                                                   -
                                                                                             -------
                                                                                             -------
                                                          --------->ARR14(2)                 <------
        <---------AHL20(2)          <---------ICU4        <---------ARR14(2)                <-------
 --------->ZAT6        <---------YAB1                  <---------ANAC46                 --------->YAB1
 
ttgaacactcttaaatttgtatgcatattatcgctaaactcattacaaaaatgaaatggagtatttgtatgtgatgcatagattactagtttgataatgt  20969400
                                  --------->LBD16
                         --------->AHL20(2)
                         <---------ICU4
                    --------->AHL20(2)  ---------->DOF2
                    ----------->TBP    <---------AHL20(2)
      ----------->ARR10 <---------AHL20(2)
--------->DOF2      <---------AHL20(2) --------->AHL20(2)--------->GLK1(2)             <---------AHL20(2)
-->ICU4   <-------TEIL  --------->AHL20(2)  --------->ALFIN1  <---------MYB52(1)      --------->AHL20(2)
---->GT1<---------ARR14(2)       --------->ANAC46    --------->YAB1           <---------TOE1(3) ----
---YAB1 --------->ARR14(2)      --------->LBD16   --------->WOX13(1)         <-----------RAV1(2)<---
--TOE2(3)--------->CCA1(2)      <---------LBD16 ------------>CBF        <-----------GT1--------->AHL20(2)
 
ttaaaagggaagatacaaaacatataaataatttccccgtaattaaagtgtggcaattagaagctgttatccaaattacttcaggtttatttaattttca  20969500
                                                                                      ----------->HVH21
                                                                                      <---------SPL7
                                          --------->YAB1                              --------->LBD16
                                         <---------YAB1                             <---------At4g35610
                                  <---------ANAC55(2)                   <---------MYB52(1) <--------
              ------------>CBF    --------->ANAC55(2)                  <-------GAMYB--------->At4g35610
             --------->TOE2(3)  <-----------GT1                       <---------MYB46(3)--------->SPL7
    ----------->GT1            <<<<<<<<<MYB98                        <------NtERF2  <---------LBD16
----->At4g35610             <---------TOE2(2)                       ------>NtERF2----------->HVH21
------At4g35610             <---------TOE1(2)      <----------DOF2 --------->DEAR3(1)--------->MYB46(3)
 
gatggaagggtattttcgtcaatactcttcgtatgttactgaacatcataaaccctttattcatttatcgccgtcgttgtctctctcaccggacgttgtt  20969600
                                 --------->YAB1
                                 <---------ICU4
        ------>NtERF2   --------->ARR14(3)                                       --------->AHL20(2)
        --------->LBD16 <---------ARR14(3)                                       <---------AHL20(2)
       <---------DEAR3(1)       <---------ATHB12                    <---------ATHB12
      --------->SPL7    <---------ARR11(3)                        --------->WOX13(1)
      <---------LBD16   --------->ARR11(3)                  --------->ZAT14    <----------DOF2  ----
<-----------GT1        --------->GLK1(1)                 <----------DOF2      --------->TOE2(3) <---
-MYB52(1)         <---------At4g35610        <---------GLK1(2)   <---------WRKY38(1)   <-----------GT1
 
ttgtttccctccggcgatttcatcggagaccttcactcatggccacaaggttctctctcgctctatagtcaatgaatagaacctttaattttaccttgtt  20969700
                                                                      <---------WOX13(1)
                                                                     <---------ANAC58
                                                                     <---------ANAC58
                                                                    <---------MYB46(3)
                                                                    --------->ATHB12
                                                                   --------->WRKY38(1)
                                                                 <-------GAMYB
                                                                <---------ANAC46
                                                                <---------DEAR3(1)
                                                           --------->MYB52(1)
                                                           <---------DOF5.7(2)
                                                         <---------MYB52(2)                       --
                                                        --------->At4g35610                      ---
                                                        <---------At4g35610                     <---
      <---------CCA1(2)                                --------->ANAC58                        <----
----->AHL20(2)                                         --------->ANAC58    --------->At4g35610------
------AHL20(2)           <------ZmHOX2a(1)   --------->CCA1(2)------->GAMYB<---------At4g35610<-----
 
taatttctcgtctctcgcattgttagtaggagattaagagcattcaagagatggatgcaagctaacggcgttgattgcagcgaagctctcaacctcgtcg  20969800
---->NtERF2
------>DEAR3(1)                                                 <---------ARR11(3)
------------------WRI1                            <---------ARR11(3)         <---------ANAC58
-----ATERF1(1)                                    --------->ARR11(3)         <---------ANAC58
--->DEAR3(1)                    <---------------------WRI1     <---------CCA1(2) ---------->ID1    -
----DEAR3(1)       <-----------HVH21           <------ZmHOX2a(1)--------->ARR11(3)        --------->YAB1
 
acgacgaaaacgatggtgtctctgtgagagcattctgcgatttgaaggaaggagatgttgttgccaatatctcaaaaactgcttgtctcactatcaaaac  20969900
                        --------->At4g35610
                    ------->TEIL
                    --------->ARR14(2)
                    --------->GLK1(2)
                    <---------ARR11(1)
                    <---------ARR14(2)                                                   <----------
             <---------YAB1                                                              --------->GLK1(2)
           <---------At4g35610                                                           --------->ARR14(2)
           --------->At4g35610                                                          <---------GLK1(2)
   <---------At4g35610  <---------At4g35610                                 <---------HSFC1(2)
   <---------ZAT2  <---------ARR14(1)                <-----------RAV1(1)    --------->HSFC1(2)
-------->ALFIN1  ------>ZmHOX2a(2)          --------->MYB59                --------->GLK1(2)
 
cagtggagctcgtgagatgatcgaatctgctgatttagatggaagtttaggtctctctgtggctctcatgtacgagagaagcttaggtgaagaatctcct  20970000
                                  --------->CCA1(2)
                      ------>ZmHOX2a(1)         <------MYB83
                     <---------------AGL15     <---------AtMYB61                                <---
               --------->GLK1(2) <---------ARR11(3)                            --------->HSFB2a(2)
              <---------GLK1(2)  --------->ARR11(1)                            <---------HSFB2a(2)
              --------->ARR14(2) --------->ARR11(3)                           <---------LBD16   ----
      <---------ARR11(3)         <---------ARR14(2)                        <---------CCA1(2)    <---
  <------MYB83<---------ARR14(2) --------->ARR14(2)                --------->GLK1(2)       <-------TEIL
  <------MYB46(1)    ===============================================================================
  <---------MYB46(3) --------------->AGL15     --------->MYB59    <---------GLK1(2)     <---------At4g35610
-ARR10--------->ARR11(3)       ----------->ARR10<------MYB46(1) ----------->ARR10       --------->At4g35610
 
tgggctggttatcttcagattcttcctattcaagaagatttgcctcttgtttggtctcttgaagacttagattctctcttatctggaactgagcttcata  20970100
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AGI:  At3g56570.1   
Description:  SET domain-containing protein. similar to ribulose-1,5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase, putative [Arabidopsis thaliana] (TAIR:AT1G14030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67091.1); contains InterPro domain RuBisCO-cytochrome methylase, RMS1 (InterPro:IPR011383); contains InterPro domain SET; (InterPro:IPR001214)
Range:  from: 20969639    to: 20972116    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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