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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                           --------->ANAC55(2)
                       <---------ANAC46
                       <---------ANAC58
                       <---------ANAC58
                   <---------ANAC58
                   <---------ANAC58
                 <-----------GT1         <---------ARR14(2)
                <---------YAB1           --------->ARR14(2)
              --------->ATHB51          <---------CCA1(2)
              -------->ATHB1          <---------ANAC46
              <---------ICU4          <---------ANAC58 <------MYB83
             --------->AHL20(2)       <---------ANAC58 <------MYB46(1)
             <---------ATHB51<---------AHL20(2)       <---------AtMYB61
             --------->ICU4<---------ANAC55(2)    --------->ARR11(3)                   <---------CCA1(2)
             <---------AHL20(2)  <---------AHL20(2)<-----------RAV1(1)              <----------DOF2
 
ctattacatgctccaaattattacttgcttatgtaatttatgcgtatattagagatgttggtgtttttctgaaatttgatatatgttcttttatctctga  20537600
               --------->YAB1                                                    <---------AHL20(2)
               <---------ICU4          <---------DAG2                            --------->AHL20(1)
            --------->YAB1             --------->TOE2(3)                         --------->AHL20(2)
            <---------ICU4             --------->TOE1(3)                    --------->AHL20(2)
   --------->CCA1(2)          <---------MYB46(3)                       ----------->GT1
<---------YAB1<---------YAB1  ----------->GT1    <----------ID1       ----------->GT1      <--------
 
aatatgatatgtgaatcatcatagcattttcagtggttacaaccttatcgaatcgacaaaagattgaaacaaattggaaaaaaataaaatagttttacta  20537700
                                                                                          <---------ANAC55(2)
                                                --------->SPL7                            <---------ANAC46
                                                <---------TOE1(2)                         <---------ANAC58
                                              <---------SPL7                              <---------ANAC55(1)
                                             <---------ANAC58                             <---------ANAC58
                  ------->TEIL               <---------ANAC58                            -----------
               --------->ICU4               --------------->AtSPL8                      <---------TGA2(2)
        ----------->GT1                     --------------->AtSPL3            ------->GAMYB        <
        <---------ANAC58                    <-------TEIL                     --------->MYB46(3)  ---
        <---------ANAC46                    <---------------AtSPL3          --------->ANAC58 -------
    <---------At4g35610         --------->CCA1(2)--------->ANAC55(2)        --------->ANAC58 -------
    --------->At4g35610        <---------AHL20(1)<---------ANAC58           --------->ANAC46 <------
   --------->ANAC46            <---------AHL20(2)<---------ANAC55(2)<---------------------WRI1  <---
---GT1  <---------ANAC58       --------->AHL20(1)<---------ANAC58  ----------->GT1     ----------->TGA1
 
ttttctaagcagcgtgaaatgaatatcagtataatatatgaaacaaattcgtacgtgataaatatgtatacagtgatacaaccaagaacgatgacgtata  20537800
                                                                     <---------ANAC55(2)
                                                              ----------->GT1
        =============================================================MADS_MADS
        --------------->AGL15                               <--------P
   <---------ANAC58                                       ----------->GT1
   <---------ANAC58                                      <---------TOE2(3)
>STF1   <---------------AGL15                            --------->DAG2
---------WOX13(1)                                      ---------->DOF2
------>ATHB12                                      ----------------->AGL1
>TEIL--------->AtLEC2--------->YAB1                ----------------->AG
-->ARR14(2)    --------->ANAC58             --------->ANAC55(2)     <---------ICU4        --------->YAB1
---ARR14(2)    --------->ANAC58             --------->ANAC55(1)    --------->ICU4        <---------YAB1
------YAB1 --------->YAB1 --------->RVE1(1) <---------ANAC55(2)  --------->YAB1 <----------DOF2   --
 
tgattgacttgcaaaaataagcaaacaaaatacctgttcaaatcgacacttaattccaaaaaggttagtaataagtaagaaggcttttatttatgaaaac  20537900
                                                               ----------->GT1
                                  ---------->DOF2        --------->HSFB2a(2)
                         <---------YAB1           <------------CBF               ---------->DOF2
      ---------->DOF2    ----------->GT1   ---------->DOF2   ---------->DOF2     <---------ZAT14
----------->GT1        --------->YAB1 <----------ID1     <---------HSFB2a(2)  ----------->GT1     --
-------->DOF2         --------->ICU4  ----------->GT1 <---------YAB1  ---------->DOF2       <-------
 
aaaaagaaataaagagcctaagagaatgatgaaaattgaaagagaaaaaagagcattgttatagaaaagaaaaaaaagagagagtaaagagaattaagaa  20538000
                   <---------HSFC1(2)
       <---------AHL20(2)
       --------->AHL20(2)
   <---------AHL20(2)
   <---------AHL20(1)                               ------>ZmHOX2a(1)
   --------->AHL20(1)                          --------->At4g35610
   --------->AHL20(2)                          <---------At4g35610
---------->CBF     --------->HSFC1(2)  *TSS    <---------ZAT2                            <------ZmHOX2a(2)
--TOE2(3)   ---------->DOF2       <----------DOF2  <---------ALFIN1                     <---------ARR11(3)
 
acacaataaattaaacaaaggaaacttcatttcttctctttatcccattcagctcctcccttctctctctctctctctctctctctctctagatcaattc  20538100
                                                      --------->ANAC46
                                        --------->TOE2(3)
                                        --------->TOE1(3)
                                        <---------------AGL15
                                        --------------->AGL15
                                       =============================================================
                                       <-----------------AG
                                       ----------------->AG
                                       ----------------->AGL1
                                       <-----------------AGL1
                                       <-----------------AGL3
                                       ----------------->AGL3
                        --------->ARR14(2)            --------->ANAC58
                        <---------ARR11(3)        --------->CCA1(2)
                        <---------ARR11(1)      <------ZmHOX2a(1)
                       <---------CCA1(2)<---------MYB59
                     --------->AtMYB61 ----------------->AGL2
                  --------->ANAC46     =============================================================
                 --------->MYB46(3)    =============================================================
          <---------YAB1<---------ARR14(2)  ---------->DOF2       ---------->DOF2
        <---------bZIP60(1)        --------->TOE1(1)  --------->ANAC58
        --------->bZIP60(1)  ----------->HVH21 ----------->GT1  <-------TEIL      <---------CCA1(2)
 
tttcttctatgatgtgattatccaccatatctgcgacctcttacctaaaaaggatacaagtaagagattcaaagatggttttctcatctcttccagtgaa  20538200
                       ----------->GT1
                     <-----------RAV1(2)
                    --------->ZAT2
                    <---------ZAT2
                    --------->At4g35610
                    <------NtERF2
                    <---------At4g35610
         --------------->AGL15
         <---------------AGL15
        ----------------->AGL1
        <-----------------AG
        ----------------->AG--------->ICU4
        ----------------->AGL2                                                               <------
        ----------------->AGL3                                               ------>ZmHOX2a(1)
        <-----------------AGL1                      <---------ARR11(3)<----------DOF2        -------
        <-----------------AGL3            <---------YAB1              <---------DAG2     --------->YAB1
        <-----------------AGL2           --------->ARR11(3)     <---------ANAC58  --------->ZAT2   -
=========================MADS_MADS       <---------ARR11(3)     <---------ANAC58  <---------ZAT2  <-
=========================MADS_MADS      --------->YAB1         --------------->AtSPL8   <------ZmHOX2a(2)
==========================MADS_MADS    <---------YAB1      <---------YAB1    ==================HOX2a_HOX2a
 
tcagttcgattcccaaaattggcagcaggtaaaaatcagtttatgatatttgctagatgtttctgattcgttcctttttcctccaagctcgatcaagatt  20538300
                                                                      --------->KAN4(2)
                                                                     <---------KAN4(1)
                                                             <---------ANAC58
                                                             <---------ANAC55(2)
                                                       <---------AHL20(1)                          <
                                                --------->ANAC58    ------->TEIL                   <
---ARR11(3)   --------->GLK1(2)                 --------->ANAC58 <---------YAB1                  <--
-->ARR11(3)----------->ARR10               <---------ZAT18   <---------ANAC58        <-----------GT1
-------->YAB1--------->ARR11(3)    --------->STY1(2)   --------->AHL20(1)--------->TOE2(3)<---------DAG2
--------YAB1 <---------ARR11(3)  ------>ZmHOX2a(1)  <---------CCA1(2)--------->KAN4(1)    <---------
 
tatgaaaatttgatgagattttgttcgacaaaattcctagctattgtggacgcgcatatatattacttatgaatattcttagttgattaaaccctttttt  20538400
                        <---------AHL20(1)
                        --------->AHL20(1)
                       --------->AHL20(2)
                 --------->ANAC58
                 --------->ANAC46
              <---------ARR14(2)
              --------->ARR14(2)
             <----------TaMYB80
        --------->HSFB2a(2)    --------->YAB1
        --------->HSFC1(1)  ---------->DOF2
---------ANAC58  --------->ANAC58 --------->ATHB12                                 <---------YAB1
---------ANAC58--------->CCA1(2) <---------YAB1                              <---------AHL20(2)
---------GT1---------->TaMYB80--------->ICU4           <-----------GT1       --------->AHL20(2)   <-
-DOF2   <---------HSFB2a(2)<---------AHL20(2)     <----------DOF2    <----------DOF2 --------->TOE2(3)
 
tttcttgtcttctcgaatatacgaaaatatataaagatgatttcaattttggtctttttttctacttcaagactttttaaaaaattattcttagttgata  20538500
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AGI:  At3g55370.1   
Description:  OBP3 (OBF-BINDING PROTEIN 3); DNA binding / transcription factor. Identical to Dof zinc finger protein DOF3.6 (DOF3.6) [Arabidopsis Thaliana] (GB:Q9M2U1;GB:Q9XGU4); similar to Dof-type zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G37590.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21679.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851)
Range:  from: 20538040    to: 20540268    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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