Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->MYB52(1)                                                            <------ZmHOX2a(2)                                          <---------At4g35610  --------->At4g35610                                          --------->ZAT2   <---------ARR14(2)                                        <------ZmHOX2a(1)  --------->ARR14(2)        --------->HSFC1(2)                           ====================HOX2a_HOX2a <-----------HVH21         --------->HSFB2a(1)                           <------ZmHOX2a(2)             --------->LBD16            --------->ARR14(2)                   --------->ATHB12     ===========================HOX2a_HOX2a      <-----------ARR10     <---------GLK1(2)   <------ZmHOX2a(1)--------->At4g35610<-----------RAV1(2) <---------YAB1 --ANAC58         --------->ICU4     <-----------RAV1(2)------->GAMYB         --------->GLK1(2) --ANAC58         <---------YAB1   ----------->RAV1(1) <---------LBD16     --------->ANAC58 >ZAT2     <---------TOE2(2)      --------->MYB46(3)  --------->MYB52(1)   --------->ANAC58      ---- -ZAT2     <---------TOE1(2)   --------->MYB46(3)     -------->P ----------->HVH21 <---------GLK1(2)   ctcttaagaatcgcatgatactgattaggatcaacaacaacaggagctgaagaatcaaccggatcagacgacggagcacgattccgattcttcccttgat  20231000                        <---------LBD16                 <---------YAB1                              <---------DOF5.7(2)             <------NtERF2                                   --------->MYB52(1)           --------->DEAR3(1)                               <---------WRKY12          --------->RAP2.3(1)                               <---------WRKY38(1)          --------->ATERF1(1)                               <---------WRKY45          --------->DEAR3(2)                               --------->DOF5.7(2)          <------NtERF2 <---------At4g35610               <-----------HVH21         <---------At4g35610       ------->TEIL          <---------ANAC46                   ------->TEIL         --------->At4g35610--------->ARR14(2)<---------ARR11(3)                          <---------ZAT14         <---------ATERF1(1)<---------ARR14(2)--------->ARR11(3)                 ---------->DOF2    < ----->YAB1--------->RAP2.3(2)    <---------GLK1(2)   <---------MYB52(1)      <---------HSFB2a(2)----   catcaacagggagccgtcgatgattctgcggtttctgaatctcaacaacatcttcggtttcgtcaacggtttcttctaatctcgaaagagactgaaccgg  20231100                                                                            <---------ATERF1(1)                                                                            <---------ALFIN1       ------>ZmHOX2a(2)                                                --------->ANAC58     --------->ARR11(3)             --------->ARR14(2)   --------->YAB1 --------->ANAC58     <---------ARR11(3)    --------->SPL7            --------->ATHB12  --------->SPL7 <---------At4g35610     <---------SPL7  <---------ARR14(2)  --------->ANAC58 ---------AtMYB61    --------->MYB52(2)  --------->ARR14(2)  --------->ANAC58       <---------WOX13(1) ----->ALFIN1    <---------ZAT6     <---------ARR14(2) <---------WOX13(1)  --------->DEAR3(1)   tggaggtgatctctcgattgtgttagtcgtagggctcgaatcggaaccagacaactcattgataagcctgtggaacgcccactccgattgacttcgagtc  20231200                                                         --------->LBD16                                                        <---------DEAR3(1)                                                        --------->DEAR3(1)                                                       --------->RAP2.3(1)                                                       <------NtERF2                                                       <---------LBD16                                                       --------->ATERF1(1)                                                      <---------RAP2.6(1)                                                      <---------RRTF1(1)                                                      <---------RAP2.3(1)                                                      <---------ATERF1(1)                                                      <---------ERF1                                                      ------>NtERF2                                                     --------->DEAR3(1)                                                     <---------DEAR3(1)                                                     <---------RAP2.3(2)                                                    --------->ATERF1(1)                                                    <------NtERF2                                                    --------->RAP2.3(1)                                                    <---------ABI4(2)                                                   <---------ORA47(2)                                                   <---------ATERF1(1)                                                   <---------ERF1                                                   <---------RRTF1(1)                                                   <---------RAP2.6(1)                                                   ------>NtERF2                                                   <---------DEAR4(2)                                                   <---------RAP2.3(1)                                                  <---------DEAR3(1)                                                  --------->DEAR3(1)                                                  --------->O2                                                  <---------RAP2.3(3)                                                  <---------RAP2.3(2)                                                  <---------O2                                                 --------->ATERF1(1)                                                 <------NtERF2                                                <---------ATERF1(1)            --------->ARR14(2)                  ------>NtERF2                             <---------ATHB12           <-------MYC3                        --------->DEAR3(1)                   <--------ZAP1           ------->MYC3                        ----------->HVH21                    <-----------HVH21           <-------MYC2                        <---------DEAR3(1)                  ----------->GT1           ------->MYC2                       --------->RAP2.3(1)                 --------->MYB59         ------>NtERF2 ----------->TGA1       <------NtERF2                     --------->ARR14(1)        <---------ALFIN1                     ------>NtERF2                     <---------ARR14(2)      ------>NtERF2 <---------At1g77200      --------->LBD16                   --------->ARR14(2)     ------->GAMYB  <---------DEAR3(1)       <---------ATERF1(1)               --------->ARR11(1)     --------->ANAC46  ----------->HVH21    <---------LBD16          --------->ANAC58 <---------WRKY12     --------->RAP2.6(2)  <---------ANAC46  --------->LBD16          --------->ANAC58 <---------WRKY38(1)     --------->ANAC58<---------DEAR3(2)    <---------LBD16           --------->ANAC46--------->WRKY18(1)     --------->ANAC58<---------MYB46(3)  <------ZmHOX2a(2)   <---------ANAC46  <---------GLK1(2)    --------->MYB46(3)<-----------HVH21 <---------ARR14(2)--------->ATERF1(1) <------ZmHOX2a(1)    --------->SPL7<-----------HVH21     --------->ARR14(2)<------NtERF2 <-----------RAV1(2)   -------   atcccatccgccacgttctgcgtcggtgacggagtcgatgacgatcccggcgacggcgccggagcgggaacaggccagaaggattcggtcaaatcatcga  20231300                     -------->P                                                         *TSS                  <---------ANAC58               <----------DOF2                   ------>ZmHOX2a(1)                  <---------ANAC58          <<<<<<<<<TBF1                         --------->TOE1(3)             <---------AtLEC2       <---------GLK1(2)<-----------GT1              --------->TOE2(3) -->ETT(2)  <-------TEIL    ------->GAMYB<<<<<<<<<TBF1 <-----------GT1        <----------DOF2   cagagaagacgatgtgcatcgcttacccaatcgcctcaaattcttcttcttcttttttctctctctctctctctctcgctctttccttaatttgtttttg  20231400                 <------------CBF                <---------ICU4                --------->ATHB51                -------->ATHB1                --------->ATHB12               <---------YAB1               --------->ICU4            ------------>ATHB5            <------NtERF2           <---------RAP2.6(3)           ------>NtERF2          --------->RAP2.3(3)          --------->ATERF1(2)          >>>>>>>>>AtERF-2          >>>>>>>>>AtERF-4          --------->ANAC58          --------->RAP2.6(2)          >>>>>>>>>AtERF-1          --------->RRTF1(3)          --------->DEAR3(1)          --------->DREB2C(2)          >>>>>>>>>AtERF-3          --------->ANAC58          >>>>>>>>>AtERF-5          >>>>>>>>>AtERF-7          --------->RAP2.3(2)          --------->ANAC46          --------->RRTF1(2)         --------->ORA47(2)         --------->DEAR3(2)         <------NtERF2         --------->RRTF1(1)         --------->RAP2.3(1)         --------->ATERF1(1)          ------->MYC3         --------->ERF1               <-------MYC3        <---------ATERF1(1)          --------->ANAC55(2)                                            <        <---------RAP2.3(1)          <---------ANAC55(2)                                           --        <---------At4g35610          --------->TGA1a                      <---------ARR11(1)   <-----        --------->At4g35610          --------->ANAC58                     <---------ARR11(3)   ------       <---------ARR14(2)            ===================================================bZIP_DOF   --       --------->TCP16(1)            --------->ANAC58                     --------->ARR11(3)  -------       --------->ARR14(2)            <---------O2                        <---------CCA1(2)    <------       --------->TCP20               --------->O2                     ------>MYB46(1)         -------    --------->ALFIN1          <---------ANAC55(2)                     ------>MYB83         --------->AHL20(2)  <---------ANAC58            --------->ANAC55(2)                    ----------->RAV1(1)   <---------ICU4  <---------O2 <---------ATHB51 ----------->HVH21                   ------->GAMYB          --------->ATHB51  <---------ANAC55(2)      <---------ARR14(2)                      <---------MYB55(2)      <---------AHL20(2)  <---------ANAC58         --------->ARR14(2)      <------------CBF--------->MYB46(3)      <--------ATHB1  <---------bZIP60(2)     <------ZmHOX2a(1)   <------------CBF    -------->P <----------DOF2  <------  <---------ANAC55(1)   ----------------------->TaNAC69(2)<---------------AtSPL8          --------->ICU4  <---------ANAC46  --------->ATHB12 ======================================MYC_MYB      --------->YAB1   tcttacgtggagccgccattattgattaggatacttgacacgtttctgtattgtattggattagtactaaccaacatatcttttttctgttaataattta  20231500 ---------AHL20(2) ------->YAB1 ----AHL20(2)                                        <---------ANAC58 --->AHL20(2)                                        --------->ALFIN1          ----------->GT1 ------->AHL20(2)                            --------->MYB52(2)               <---------------AtSPL8 -->AHL20(1)                              <----------DOF2        <----------DOF2 ---AHL20(2)                    <---------AHL20(2)   <---------ANAC58        --------->DAG2 <-------- -->AHL20(2)         ---------->DOF2      --------->TOE2(3)   <---------AHL20(2)     --------->YAB1<- ---AHL20(1) <---------TOE2(3) --------->AHL20(2)  <---------ANAC46        ---------->DOF2  ---------   ataaaaatgcaaattaaggcattcaaaggcattttaaatttctactttagttgatgtgtgtcatttactttgtgggcaaaagggtaagaataatgtgttg  20231600                 <---------TOE2(3)                                                                  <                 <---------TOE1(3)                                                                  <                 <---------TOE1(2)                                                                 --             --------->At4g35610                                                                   --             --------->ZAT2    <----------DOF2             --------->ATHB12                      ----         --------->ANAC58    ---------->ID1    ------>ZmHOX2a(1)                           <---------YAB1 ---RAV1(1)  <---------At4g35610     <-----------GT1    <---------ANAC58                 --------->YAB1 ---------DOF2   <---------TOE2(2)  <-----------GT1     <---------ANAC58              <---------CCA1(2) >ALFIN1 --------->ANAC58<----------DOF2   ------>ZmHOX2a(1)                        --------->YAB1 <-   gctttatagataagcagcttaggtttcctttgtcttttttaactccttcctctcattttcttgatttgatagctactctctcttattcatatcatcagta  20231700         <---------ALFIN1                  --------->ANAC58 ---------CCA1(1)                          --------->ANAC58                          ---------->DOF2 ---------RVE1(1)                  <----------DOF2                                 <---------------AGL15 ------->ARR11(3)               --------->ANAC58       <---------GLK1(1)          <-----------------AGL1 ------->ARR14(2)               --------->ANAC58     <------ZmHOX2a(1)            ----------------->AG ------->ARR10              --------->ANAC58  --------->MYB52(1)         --------->DAG2   ----------- --------ARR11(3)           --------->ANAC58  ---------->DOF2           ---------->DOF2 *TSS       --   agatattctcaccacatatgatgcatgagtaagcaagctttaaacaagtaaaggaggaactcagtgagactgaagaaagtggtaacccaaagaggttaca  20231800                  <---------ANAC58                  ----------->RAV1(2)                  <---------ANAC58     <---------ZAT2     --------->At4g35610     <---------At4g35610                                                          ----------->GT1    --------->ARR14(2)                                                      <---------At4g35610    <---------ARR14(2)                                         <-----------HVH21 <---------YAB1   <------ZmHOX2a(1)                    ----------->GT1     ---------->DOF2 <---------ZAT2 >GT1--------->ZAT2                 <---------STY1(1)      --------->YAB1   --------->At4g35610 ----->GAMYB --------->YAB1    <---------GLK1(1)     --------->YAB1<---------ANAC55(2) ---------->DOF2   accgaggagctgcaaacatagcctgacttcaagagacccgaggggataaaccgaataagaatcaaagtcacctaagtcagcttatggtaaaaagaaggta  20231900  Previous    Next  AGI:  At3g54620.1    Description:  ATBZIP25/BZO2H4 (ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 25); protein heterodimerization/ transcription factor. similar to BZO2H1 (ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 10), DNA binding / protein heterodimerization/ sequence-specific DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G02640.1); similar to unknown [Populus trichocarpa] (GB:ABK95078.1); contains InterPro domain bZIP transcription factor, bZIP-1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) Range:  from: 20228875    to: 20231388    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g54625.1    Description:  other RNA Range:  from: 20231788    to: 20234002    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version